RNA–Protein interactions for RNA: ENST00000543631.5

SPARCL1-210, Transcript of SPARC like 1, humanhuman

TSL 4

Gene SPARCL1, Length 583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARCL1-210ENST00000543631 RUFY2Q8WXA3 655 aa6.13□□□□□ -1.43
SPARCL1-210ENST00000543631 RPGRQ92834 1020 aaKnown RBP6.13□□□□□ -1.43
SPARCL1-210ENST00000543631 BACH2Q9BYV9 841 aa6.13□□□□□ -1.43
SPARCL1-210ENST00000543631 ECHDC1Q9NTX5 307 aa6.13□□□□□ -1.43
SPARCL1-210ENST00000543631 GPC6Q9Y625 555 aaPredicted RBP6.13□□□□□ -1.43
SPARCL1-210ENST00000543631 MROH5Q6ZUA9 1318 aa6.13□□□□□ -1.43
SPARCL1-210ENST00000543631 DDX60Q8IY21 1712 aaKnown RBP6.13□□□□□ -1.43
SPARCL1-210ENST00000543631 SPEF2Q9C093 1822 aa6.13□□□□□ -1.43
SPARCL1-210ENST00000543631 KRTAP4-8A0A0G2JLE6 195 aa6.12□□□□□ -1.43
SPARCL1-210ENST00000543631 HIP1O00291 1037 aa6.12□□□□□ -1.43
SPARCL1-210ENST00000543631 SERPINB2P05120 415 aa6.12□□□□□ -1.43
SPARCL1-210ENST00000543631 IFIT1P09914 478 aaKnown RBP6.12□□□□□ -1.43
SPARCL1-210ENST00000543631 SLC5A1P13866 664 aa6.12□□□□□ -1.43
SPARCL1-210ENST00000543631 KCNJ4P48050 445 aa6.12□□□□□ -1.43
SPARCL1-210ENST00000543631 RFX5P48382 616 aaPredicted RBP6.12□□□□□ -1.43
SPARCL1-210ENST00000543631 TFCP2Q12800 502 aa6.12□□□□□ -1.43
SPARCL1-210ENST00000543631 NFIXQ14938 502 aa6.12□□□□□ -1.43
SPARCL1-210ENST00000543631 SLC15A2Q16348 729 aa6.12□□□□□ -1.43
SPARCL1-210ENST00000543631 TNNI3KQ59H18 835 aa6.12□□□□□ -1.43
SPARCL1-210ENST00000543631 TTC39AQ5SRH9 613 aa6.12□□□□□ -1.43
SPARCL1-210ENST00000543631 CASZ1Q86V15 1759 aa6.12□□□□□ -1.43
SPARCL1-210ENST00000543631 SLC9A9Q8IVB4 645 aa6.12□□□□□ -1.43
SPARCL1-210ENST00000543631 RBM17Q96I25 401 aaKnown RBP6.12□□□□□ -1.43
SPARCL1-210ENST00000543631 ZNF594Q96JF6 807 aaPredicted RBP6.12□□□□□ -1.43
SPARCL1-210ENST00000543631 NACC1Q96RE7 527 aa6.12□□□□□ -1.43
SPARCL1-210ENST00000543631 CCDC8Q9H0W5 538 aaPredicted RBP6.12□□□□□ -1.43
SPARCL1-210ENST00000543631 GREM2Q9H772 168 aa6.12□□□□□ -1.43
SPARCL1-210ENST00000543631 GPR108Q9NPR9 543 aa6.12□□□□□ -1.43
SPARCL1-210ENST00000543631 FPGT-TNNI3KV9GXZ4 949 aa6.12□□□□□ -1.43
SPARCL1-210ENST00000543631 COL24A1Q17RW2 1714 aa6.11□□□□□ -1.43
SPARCL1-210ENST00000543631 A0A0A0MRY4 1105 aa6.11□□□□□ -1.43
SPARCL1-210ENST00000543631 A0A1B0GUL7 405 aa6.11□□□□□ -1.43
SPARCL1-210ENST00000543631 HYAL3O43820 417 aaPredicted RBP6.11□□□□□ -1.43
SPARCL1-210ENST00000543631 SASH1O94885 1247 aa6.11□□□□□ -1.43
SPARCL1-210ENST00000543631 REC8O95072 547 aa6.11□□□□□ -1.43
SPARCL1-210ENST00000543631 GYS1P13807 737 aa6.11□□□□□ -1.43
SPARCL1-210ENST00000543631 MCCP23508 829 aa6.11□□□□□ -1.43
SPARCL1-210ENST00000543631 MFAP1P55081 439 aaKnown RBP6.11□□□□□ -1.43
SPARCL1-210ENST00000543631 GTF2IP78347 998 aa6.11□□□□□ -1.43
SPARCL1-210ENST00000543631 TYRO3Q06418 890 aa6.11□□□□□ -1.43
SPARCL1-210ENST00000543631 SF3B3Q15393 1217 aaKnown RBP6.11□□□□□ -1.43
SPARCL1-210ENST00000543631 ATP2B3Q16720 1220 aa6.11□□□□□ -1.43
SPARCL1-210ENST00000543631 SLC10A5Q5PT55 438 aa6.11□□□□□ -1.43
SPARCL1-210ENST00000543631 SHISA2Q6UWI4 295 aa6.11□□□□□ -1.43
SPARCL1-210ENST00000543631 KIAA1211Q6ZU35 1233 aa6.11□□□□□ -1.43
SPARCL1-210ENST00000543631 SMIM5Q71RC9 77 aa6.11□□□□□ -1.43
SPARCL1-210ENST00000543631 VPS37DQ86XT2 251 aa6.11□□□□□ -1.43
SPARCL1-210ENST00000543631 SYNE4Q8N205 404 aa6.11□□□□□ -1.43
SPARCL1-210ENST00000543631 EVI5LQ96CN4 794 aa6.11□□□□□ -1.43
SPARCL1-210ENST00000543631 ANKRD2Q9GZV1 360 aa6.11□□□□□ -1.43
SPARCL1-210ENST00000543631 DIAPH3Q9NSV4 1193 aa6.11□□□□□ -1.43
SPARCL1-210ENST00000543631 STAP2Q9UGK3 403 aa6.11□□□□□ -1.43
SPARCL1-210ENST00000543631 TUBGCP6Q96RT7 1819 aa6.11□□□□□ -1.43
SPARCL1-210ENST00000543631 QSER1Q2KHR3 1735 aa6.11□□□□□ -1.43
SPARCL1-210ENST00000543631 RTL9Q8NET4 1388 aa6.1□□□□□ -1.43
SPARCL1-210ENST00000543631 FRAT2O75474 233 aaPredicted RBP6.1□□□□□ -1.43
SPARCL1-210ENST00000543631 PDE8BO95263 885 aa6.1□□□□□ -1.43
SPARCL1-210ENST00000543631 UQCRFS1P1P0C7P4 283 aa6.1□□□□□ -1.43
SPARCL1-210ENST00000543631 ELNP15502 786 aa6.1□□□□□ -1.43
SPARCL1-210ENST00000543631 SDSP20132 328 aa6.1□□□□□ -1.43
SPARCL1-210ENST00000543631 PDE6BP35913 854 aa6.1□□□□□ -1.43
SPARCL1-210ENST00000543631 RPS8P62241 208 aaKnown RBP6.1□□□□□ -1.43
SPARCL1-210ENST00000543631 PUM3Q15397 648 aaKnown RBP6.1□□□□□ -1.43
SPARCL1-210ENST00000543631 ZNF827Q17R98 1081 aa6.1□□□□□ -1.43
SPARCL1-210ENST00000543631 C8orf34Q49A92 452 aa6.1□□□□□ -1.43
SPARCL1-210ENST00000543631 LRRC24Q50LG9 513 aa6.1□□□□□ -1.43
SPARCL1-210ENST00000543631 CAVIN4Q5BKX8 364 aa6.1□□□□□ -1.43
SPARCL1-210ENST00000543631 TXNRD3Q86VQ6 643 aa6.1□□□□□ -1.43
SPARCL1-210ENST00000543631 COL23A1Q86Y22 540 aaPredicted RBP6.1□□□□□ -1.43
SPARCL1-210ENST00000543631 TNS4Q8IZW8 715 aa6.1□□□□□ -1.43
SPARCL1-210ENST00000543631 LPIN2Q92539 896 aa6.1□□□□□ -1.43
SPARCL1-210ENST00000543631 LENG1Q96BZ8 264 aaPredicted RBP6.1□□□□□ -1.43
SPARCL1-210ENST00000543631 EAF2Q96CJ1 260 aaPredicted RBP6.1□□□□□ -1.43
SPARCL1-210ENST00000543631 HSH2DQ96JZ2 352 aa6.1□□□□□ -1.43
SPARCL1-210ENST00000543631 CAMKK2Q96RR4 588 aa6.1□□□□□ -1.43
SPARCL1-210ENST00000543631 DNAJC2Q99543 621 aaKnown RBP6.1□□□□□ -1.43
SPARCL1-210ENST00000543631 FSD1Q9BTV5 496 aa6.1□□□□□ -1.43
SPARCL1-210ENST00000543631 BOLA2Q9H3K6 86 aa6.1□□□□□ -1.43
SPARCL1-210ENST00000543631 GNL3LQ9NVN8 582 aaKnown RBP6.1□□□□□ -1.43
SPARCL1-210ENST00000543631 RBM19Q9Y4C8 960 aaKnown RBP6.1□□□□□ -1.43
SPARCL1-210ENST00000543631 MYH13Q9UKX3 1938 aa6.09□□□□□ -1.43
SPARCL1-210ENST00000543631 C9orf172C9J069 976 aa6.09□□□□□ -1.43
SPARCL1-210ENST00000543631 BACH1O14867 736 aa6.09□□□□□ -1.43
SPARCL1-210ENST00000543631 MMP10P09238 476 aa6.09□□□□□ -1.43
SPARCL1-210ENST00000543631 ATP5JP18859 108 aa6.09□□□□□ -1.43
SPARCL1-210ENST00000543631 TM4SF1P30408 202 aa6.09□□□□□ -1.43
SPARCL1-210ENST00000543631 ALDH1B1P30837 517 aa6.09□□□□□ -1.43
SPARCL1-210ENST00000543631 ABL2P42684 1182 aa6.09□□□□□ -1.43
SPARCL1-210ENST00000543631 HIRAP54198 1017 aaPredicted RBP6.09□□□□□ -1.43
SPARCL1-210ENST00000543631 TIMM10P62072 90 aa6.09□□□□□ -1.43
SPARCL1-210ENST00000543631 TTF1Q15361 905 aaPredicted RBP6.09□□□□□ -1.43
SPARCL1-210ENST00000543631 TSHZ3Q63HK5 1081 aa6.09□□□□□ -1.43
SPARCL1-210ENST00000543631 PRR5LQ6MZQ0 368 aa6.09□□□□□ -1.43
SPARCL1-210ENST00000543631 ATG9AQ7Z3C6 839 aa6.09□□□□□ -1.43
SPARCL1-210ENST00000543631 TMC4Q7Z404 712 aa6.09□□□□□ -1.43
SPARCL1-210ENST00000543631 DEFB132Q7Z7B7 95 aa6.09□□□□□ -1.43
SPARCL1-210ENST00000543631 ZNF280CQ8ND82 737 aa6.09□□□□□ -1.43
SPARCL1-210ENST00000543631 OTUD7AQ8TE49 926 aaPredicted RBP6.09□□□□□ -1.43
SPARCL1-210ENST00000543631 DBNDD2Q9BQY9 259 aa6.09□□□□□ -1.43
SPARCL1-210ENST00000543631 PUS3Q9BZE2 481 aaKnown RBP6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms