RNA–Protein interactions for RNA: ENST00000543205.1

CLIP1-217, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 2,018 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-217ENST00000543205 JDP2Q8WYK2 163 aa6.24□□□□□ -1.41
CLIP1-217ENST00000543205 FAM161BQ96MY7 647 aa6.24□□□□□ -1.41
CLIP1-217ENST00000543205 ASB16Q96NS5 453 aa6.24□□□□□ -1.41
CLIP1-217ENST00000543205 ZC3H12CQ9C0D7 883 aaKnown RBP6.24□□□□□ -1.41
CLIP1-217ENST00000543205 BCL11AQ9H165 835 aa6.24□□□□□ -1.41
CLIP1-217ENST00000543205 TUT1Q9H6E5 874 aaKnown RBP6.24□□□□□ -1.41
CLIP1-217ENST00000543205 CAPN10Q9HC96 672 aa6.24□□□□□ -1.41
CLIP1-217ENST00000543205 PCDHGA11Q9Y5H2 935 aa6.24□□□□□ -1.41
CLIP1-217ENST00000543205 TAF1P21675 1872 aa6.24□□□□□ -1.41
CLIP1-217ENST00000543205 ZNF804BA4D1E1 1349 aa6.23□□□□□ -1.41
CLIP1-217ENST00000543205 ABL1P00519 1130 aa6.23□□□□□ -1.41
CLIP1-217ENST00000543205 AOC3Q16853 763 aa6.23□□□□□ -1.41
CLIP1-217ENST00000543205 CCDC102BQ68D86 513 aa6.23□□□□□ -1.41
CLIP1-217ENST00000543205 ATG9AQ7Z3C6 839 aa6.23□□□□□ -1.41
CLIP1-217ENST00000543205 NIM1KQ8IY84 436 aa6.23□□□□□ -1.41
CLIP1-217ENST00000543205 NOP58Q9Y2X3 529 aaKnown RBP6.23□□□□□ -1.41
CLIP1-217ENST00000543205 AXIN1O15169 862 aa6.23□□□□□ -1.41
CLIP1-217ENST00000543205 MAFGO15525 162 aa6.23□□□□□ -1.41
CLIP1-217ENST00000543205 PDE8BO95263 885 aa6.23□□□□□ -1.41
CLIP1-217ENST00000543205 KIAA2012Q0VF49 1180 aa6.23□□□□□ -1.41
CLIP1-217ENST00000543205 UBE4AQ14139 1066 aa6.23□□□□□ -1.41
CLIP1-217ENST00000543205 PUM3Q15397 648 aaKnown RBP6.23□□□□□ -1.41
CLIP1-217ENST00000543205 ECM1Q16610 540 aa6.23□□□□□ -1.41
CLIP1-217ENST00000543205 GPR101Q96P66 508 aaPredicted RBP6.23□□□□□ -1.41
CLIP1-217ENST00000543205 ACBD3Q9H3P7 528 aa6.23□□□□□ -1.41
CLIP1-217ENST00000543205 SNED1Q8TER0 1413 aa6.23□□□□□ -1.41
CLIP1-217ENST00000543205 WTIPA6NIX2 430 aaPredicted RBP6.22□□□□□ -1.41
CLIP1-217ENST00000543205 IFIT1P09914 478 aaKnown RBP6.22□□□□□ -1.41
CLIP1-217ENST00000543205 SLC5A1P13866 664 aa6.22□□□□□ -1.41
CLIP1-217ENST00000543205 PRELPP51888 382 aa6.22□□□□□ -1.41
CLIP1-217ENST00000543205 RELBQ01201 579 aa6.22□□□□□ -1.41
CLIP1-217ENST00000543205 TFCP2Q12800 502 aa6.22□□□□□ -1.41
CLIP1-217ENST00000543205 DPYDQ12882 1025 aa6.22□□□□□ -1.41
CLIP1-217ENST00000543205 Q6ZVU0 165 aa6.22□□□□□ -1.41
CLIP1-217ENST00000543205 ERC1Q8IUD2 1116 aa6.22□□□□□ -1.41
CLIP1-217ENST00000543205 ANKMY2Q8IV38 441 aa6.22□□□□□ -1.41
CLIP1-217ENST00000543205 SIRT2Q8IXJ6 389 aa6.22□□□□□ -1.41
CLIP1-217ENST00000543205 SIX5Q8N196 739 aa6.22□□□□□ -1.41
CLIP1-217ENST00000543205 AGBL1Q96MI9 1066 aa6.22□□□□□ -1.41
CLIP1-217ENST00000543205 ARHGEF10LQ9HCE6 1279 aa6.22□□□□□ -1.41
CLIP1-217ENST00000543205 RAB6BQ9NRW1 208 aa6.22□□□□□ -1.41
CLIP1-217ENST00000543205 EXOC6BQ9Y2D4 811 aa6.22□□□□□ -1.41
CLIP1-217ENST00000543205 AKAP2Q9Y2D5 859 aa6.22□□□□□ -1.41
CLIP1-217ENST00000543205 MRPL42Q9Y6G3 142 aaKnown RBP6.22□□□□□ -1.41
CLIP1-217ENST00000543205 LRRC37AA6NMS7 1700 aa6.22□□□□□ -1.41
CLIP1-217ENST00000543205 SPEF2Q9C093 1822 aa6.22□□□□□ -1.41
CLIP1-217ENST00000543205 SNAP23O00161 211 aa6.21□□□□□ -1.41
CLIP1-217ENST00000543205 ECE2O60344 883 aa6.21□□□□□ -1.41
CLIP1-217ENST00000543205 PPFIA4O75335 1185 aa6.21□□□□□ -1.41
CLIP1-217ENST00000543205 STAU1O95793 577 aaKnown RBP6.21□□□□□ -1.41
CLIP1-217ENST00000543205 DNAJA1P31689 397 aaKnown RBP6.21□□□□□ -1.41
CLIP1-217ENST00000543205 EIF6P56537 245 aaKnown RBP6.21□□□□□ -1.41
CLIP1-217ENST00000543205 ATP2B3Q16720 1220 aa6.21□□□□□ -1.41
CLIP1-217ENST00000543205 CAVIN4Q5BKX8 364 aa6.21□□□□□ -1.41
CLIP1-217ENST00000543205 COL13A1Q5TAT6 717 aaPredicted RBP6.21□□□□□ -1.41
CLIP1-217ENST00000543205 ZNF804AQ7Z570 1209 aa6.21□□□□□ -1.41
CLIP1-217ENST00000543205 VPS37DQ86XT2 251 aa6.21□□□□□ -1.41
CLIP1-217ENST00000543205 RPUSD2Q8IZ73 545 aaKnown RBP6.21□□□□□ -1.41
CLIP1-217ENST00000543205 MEIOBQ8N635 442 aa6.21□□□□□ -1.41
CLIP1-217ENST00000543205 VGLL2Q8N8G2 317 aa6.21□□□□□ -1.41
CLIP1-217ENST00000543205 ZSCAN1Q8NBB4 408 aa6.21□□□□□ -1.41
CLIP1-217ENST00000543205 LPIN2Q92539 896 aa6.21□□□□□ -1.41
CLIP1-217ENST00000543205 DBNDD1Q9H9R9 158 aa6.21□□□□□ -1.41
CLIP1-217ENST00000543205 RNF19AQ9NV58 838 aa6.21□□□□□ -1.41
CLIP1-217ENST00000543205 ZNRF3Q9ULT6 936 aa6.21□□□□□ -1.41
CLIP1-217ENST00000543205 FER1L6Q2WGJ9 1857 aa6.21□□□□□ -1.41
CLIP1-217ENST00000543205 MED23Q9ULK4 1368 aa6.21□□□□□ -1.41
CLIP1-217ENST00000543205 GNRH1P01148 92 aa6.21□□□□□ -1.42
CLIP1-217ENST00000543205 KLRK1P26718 216 aa6.21□□□□□ -1.42
CLIP1-217ENST00000543205 GDF10P55107 478 aa6.21□□□□□ -1.42
CLIP1-217ENST00000543205 EAPPQ56P03 285 aaPredicted RBP6.21□□□□□ -1.42
CLIP1-217ENST00000543205 ZNF746Q6NUN9 644 aaPredicted RBP6.21□□□□□ -1.42
CLIP1-217ENST00000543205 C15orf52Q6ZUT6 534 aaKnown RBP6.21□□□□□ -1.42
CLIP1-217ENST00000543205 SMC5Q8IY18 1101 aa6.21□□□□□ -1.42
CLIP1-217ENST00000543205 TNS4Q8IZW8 715 aa6.21□□□□□ -1.42
CLIP1-217ENST00000543205 DNAJC5GQ8N7S2 189 aa6.21□□□□□ -1.42
CLIP1-217ENST00000543205 FAM200AQ8TCP9 573 aa6.21□□□□□ -1.42
CLIP1-217ENST00000543205 NEUROD6Q96NK8 337 aa6.21□□□□□ -1.42
CLIP1-217ENST00000543205 COA1Q9GZY4 146 aa6.21□□□□□ -1.42
CLIP1-217ENST00000543205 RWDD1Q9H446 243 aaPredicted RBP6.21□□□□□ -1.42
CLIP1-217ENST00000543205 G3BP2Q9UN86 482 aaKnown RBP6.21□□□□□ -1.42
CLIP1-217ENST00000543205 DUOX1Q9NRD9 1551 aa6.2□□□□□ -1.42
CLIP1-217ENST00000543205 FZD9O00144 591 aa6.2□□□□□ -1.42
CLIP1-217ENST00000543205 SASH1O94885 1247 aa6.2□□□□□ -1.42
CLIP1-217ENST00000543205 UPP2O95045 317 aa6.2□□□□□ -1.42
CLIP1-217ENST00000543205 FGFR2P21802 821 aa6.2□□□□□ -1.42
CLIP1-217ENST00000543205 HIBADHP31937 336 aaKnown RBP6.2□□□□□ -1.42
CLIP1-217ENST00000543205 GYG1P46976 350 aa6.2□□□□□ -1.42
CLIP1-217ENST00000543205 SEC13P55735 322 aa6.2□□□□□ -1.42
CLIP1-217ENST00000543205 FANCCQ00597 558 aa6.2□□□□□ -1.42
CLIP1-217ENST00000543205 BMS1Q14692 1282 aaKnown RBP6.2□□□□□ -1.42
CLIP1-217ENST00000543205 TNIP1Q15025 636 aa6.2□□□□□ -1.42
CLIP1-217ENST00000543205 PODNQ7Z5L7 613 aa6.2□□□□□ -1.42
CLIP1-217ENST00000543205 TXNRD3Q86VQ6 643 aa6.2□□□□□ -1.42
CLIP1-217ENST00000543205 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.2□□□□□ -1.42
CLIP1-217ENST00000543205 STAG1Q8WVM7 1258 aa6.2□□□□□ -1.42
CLIP1-217ENST00000543205 KIF1BPQ96EK5 621 aa6.2□□□□□ -1.42
CLIP1-217ENST00000543205 PLCD4Q9BRC7 762 aa6.2□□□□□ -1.42
CLIP1-217ENST00000543205 DCTPP1Q9H773 170 aa6.2□□□□□ -1.42
CLIP1-217ENST00000543205 ETNK1Q9HBU6 452 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms