RNA–Protein interactions for RNA: ENST00000542179.1

LDHA-220, Transcript of lactate dehydrogenase A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDHA, Length 1,288 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-220ENST00000542179 IFIT1BQ5T764 474 aaKnown RBP10.8□□□□□ -0.68
LDHA-220ENST00000542179 RCSD1Q6JBY9 416 aa10.8□□□□□ -0.68
LDHA-220ENST00000542179 NFXL1Q6ZNB6 911 aa10.8□□□□□ -0.68
LDHA-220ENST00000542179 SH3BP5LQ7L8J4 393 aa10.8□□□□□ -0.68
LDHA-220ENST00000542179 SLC44A5Q8NCS7 719 aa10.8□□□□□ -0.68
LDHA-220ENST00000542179 RGS22Q8NE09 1264 aa10.8□□□□□ -0.68
LDHA-220ENST00000542179 NSUN7Q8NE18 718 aaKnown RBP10.8□□□□□ -0.68
LDHA-220ENST00000542179 IL17RBQ9NRM6 502 aa10.8□□□□□ -0.68
LDHA-220ENST00000542179 CNOT7Q9UIV1 285 aaKnown RBP10.8□□□□□ -0.68
LDHA-220ENST00000542179 CCDC196A0A1B0GTZ2 297 aa10.79□□□□□ -0.68
LDHA-220ENST00000542179 DDAH1O94760 285 aa10.79□□□□□ -0.68
LDHA-220ENST00000542179 BRD1O95696 1058 aa10.79□□□□□ -0.68
LDHA-220ENST00000542179 CALM1P0DP23 149 aa10.79□□□□□ -0.68
LDHA-220ENST00000542179 CALM2P0DP24 149 aa10.79□□□□□ -0.68
LDHA-220ENST00000542179 CALM3P0DP25 149 aa10.79□□□□□ -0.68
LDHA-220ENST00000542179 SHMT1P34896 483 aa10.79□□□□□ -0.68
LDHA-220ENST00000542179 METAP2P50579 478 aaKnown RBP eCLIP10.79□□□□□ -0.685e-10■■□□□ 11.5
LDHA-220ENST00000542179 CCT2P78371 535 aaKnown RBP10.79□□□□□ -0.68
LDHA-220ENST00000542179 TCP10Q12799 353 aa10.79□□□□□ -0.68
LDHA-220ENST00000542179 TROAPQ12815 778 aa10.79□□□□□ -0.68
LDHA-220ENST00000542179 TATDN1Q6P1N9 297 aa10.79□□□□□ -0.68
LDHA-220ENST00000542179 CLEC17AQ6ZS10 378 aa10.79□□□□□ -0.68
LDHA-220ENST00000542179 ZNF654Q8IZM8 581 aa10.79□□□□□ -0.68
LDHA-220ENST00000542179 CCDC17Q96LX7 622 aa10.79□□□□□ -0.68
LDHA-220ENST00000542179 MAP3K14Q99558 947 aa10.79□□□□□ -0.68
LDHA-220ENST00000542179 FAM217BQ9NTX9 383 aaPredicted RBP10.79□□□□□ -0.68
LDHA-220ENST00000542179 GJA3Q9Y6H8 435 aa10.79□□□□□ -0.68
LDHA-220ENST00000542179 WDR33Q9C0J8 1336 aaKnown RBP10.79□□□□□ -0.68
LDHA-220ENST00000542179 CNTNAP1P78357 1384 aa10.78□□□□□ -0.68
LDHA-220ENST00000542179 IGKV6D-41A0A0C4DH26 115 aa10.78□□□□□ -0.68
LDHA-220ENST00000542179 H7C1D1 291 aa10.78□□□□□ -0.68
LDHA-220ENST00000542179 GRIN3BO60391 1043 aa10.78□□□□□ -0.68
LDHA-220ENST00000542179 CDKL5O76039 1030 aa10.78□□□□□ -0.68
LDHA-220ENST00000542179 SYT1P21579 422 aa10.78□□□□□ -0.68
LDHA-220ENST00000542179 TNNI2P48788 182 aa10.78□□□□□ -0.68
LDHA-220ENST00000542179 NTRK3Q16288 839 aa10.78□□□□□ -0.68
LDHA-220ENST00000542179 NBPF9Q3BBW0 867 aa10.78□□□□□ -0.68
LDHA-220ENST00000542179 CPLX2Q6PUV4 134 aaKnown RBP10.78□□□□□ -0.68
LDHA-220ENST00000542179 CATIPQ7Z7H3 387 aa10.78□□□□□ -0.68
LDHA-220ENST00000542179 FANCBQ8NB91 859 aa10.78□□□□□ -0.68
LDHA-220ENST00000542179 TNPO1Q92973 898 aaKnown RBP10.78□□□□□ -0.68
LDHA-220ENST00000542179 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.78□□□□□ -0.68
LDHA-220ENST00000542179 NCOA5Q9HCD5 579 aaKnown RBP10.78□□□□□ -0.68
LDHA-220ENST00000542179 WDR70Q9NW82 654 aa10.78□□□□□ -0.68
LDHA-220ENST00000542179 GPRC5DQ9NZD1 345 aa10.78□□□□□ -0.68
LDHA-220ENST00000542179 PGAP2Q9UHJ9 254 aa10.78□□□□□ -0.68
LDHA-220ENST00000542179 HERC5Q9UII4 1024 aaKnown RBP10.78□□□□□ -0.68
LDHA-220ENST00000542179 NAP1L2Q9ULW6 460 aaPredicted RBP10.78□□□□□ -0.68
LDHA-220ENST00000542179 ZDHHC9Q9Y397 364 aa10.78□□□□□ -0.68
LDHA-220ENST00000542179 KIF3AQ9Y496 699 aa10.78□□□□□ -0.68
LDHA-220ENST00000542179 SIPA1L1O43166 1804 aa10.78□□□□□ -0.68
LDHA-220ENST00000542179 SHTN1A0MZ66 631 aa10.77□□□□□ -0.69
LDHA-220ENST00000542179 CLRN2A0PK11 232 aa10.77□□□□□ -0.69
LDHA-220ENST00000542179 PTPDC1A2A3K4 754 aa10.77□□□□□ -0.69
LDHA-220ENST00000542179 GOLGA8AA7E2F4 631 aa10.77□□□□□ -0.69
LDHA-220ENST00000542179 TCP10L2B9ZVM9 353 aa10.77□□□□□ -0.69
LDHA-220ENST00000542179 CPLX1O14810 134 aa10.77□□□□□ -0.69
LDHA-220ENST00000542179 STX6O43752 255 aa10.77□□□□□ -0.69
LDHA-220ENST00000542179 NMT2O60551 498 aa10.77□□□□□ -0.69
LDHA-220ENST00000542179 JAK2O60674 1132 aa10.77□□□□□ -0.69
LDHA-220ENST00000542179 FDPSP14324 419 aaKnown RBP10.77□□□□□ -0.69
LDHA-220ENST00000542179 IFNAR1P17181 557 aa10.77□□□□□ -0.69
LDHA-220ENST00000542179 CDC27P30260 824 aa10.77□□□□□ -0.69
LDHA-220ENST00000542179 MAP3K10Q02779 954 aa10.77□□□□□ -0.69
LDHA-220ENST00000542179 TNFAIP1Q13829 316 aa10.77□□□□□ -0.69
LDHA-220ENST00000542179 PKP1Q13835 747 aa10.77□□□□□ -0.69
LDHA-220ENST00000542179 RTN1Q16799 776 aa10.77□□□□□ -0.69
LDHA-220ENST00000542179 LARP1BQ659C4 914 aaKnown RBP10.77□□□□□ -0.69
LDHA-220ENST00000542179 MICU3Q86XE3 530 aa10.77□□□□□ -0.69
LDHA-220ENST00000542179 ZSCAN29Q8IWY8 852 aaPredicted RBP10.77□□□□□ -0.69
LDHA-220ENST00000542179 CRACR2BQ8N4Y2 399 aaPredicted RBP10.77□□□□□ -0.69
LDHA-220ENST00000542179 ZNF784Q8NCA9 323 aaPredicted RBP10.77□□□□□ -0.69
LDHA-220ENST00000542179 DNAJC18Q9H819 358 aa10.77□□□□□ -0.69
LDHA-220ENST00000542179 RBM28Q9NW13 759 aaKnown RBP10.77□□□□□ -0.69
LDHA-220ENST00000542179 RNF181Q9P0P0 153 aa10.77□□□□□ -0.69
LDHA-220ENST00000542179 ZC3H4Q9UPT8 1303 aaKnown RBP10.77□□□□□ -0.69
LDHA-220ENST00000542179 GREB1LQ9C091 1923 aaPredicted RBP10.76□□□□□ -0.69
LDHA-220ENST00000542179 HRO43593 1189 aa10.76□□□□□ -0.69
LDHA-220ENST00000542179 TOP1P11387 765 aaKnown RBP10.76□□□□□ -0.69
LDHA-220ENST00000542179 AKR1B1P15121 316 aa10.76□□□□□ -0.69
LDHA-220ENST00000542179 ADD1P35611 737 aaKnown RBP10.76□□□□□ -0.69
LDHA-220ENST00000542179 KIF4BQ2VIQ3 1234 aa10.76□□□□□ -0.69
LDHA-220ENST00000542179 C9orf131Q5VYM1 1079 aa10.76□□□□□ -0.69
LDHA-220ENST00000542179 SAMD7Q7Z3H4 446 aa10.76□□□□□ -0.69
LDHA-220ENST00000542179 FAM184AQ8NB25 1140 aa10.76□□□□□ -0.69
LDHA-220ENST00000542179 CSRNP1Q96S65 589 aa10.76□□□□□ -0.69
LDHA-220ENST00000542179 TMEM47Q9BQJ4 181 aa10.76□□□□□ -0.69
LDHA-220ENST00000542179 MYL10Q9BUA6 226 aa10.76□□□□□ -0.69
LDHA-220ENST00000542179 SLC4A5Q9BY07 1137 aa10.76□□□□□ -0.69
LDHA-220ENST00000542179 KAT14Q9H8E8 782 aa10.76□□□□□ -0.69
LDHA-220ENST00000542179 VEZTQ9HBM0 779 aa10.76□□□□□ -0.69
LDHA-220ENST00000542179 MTMR4Q9NYA4 1195 aa10.76□□□□□ -0.69
LDHA-220ENST00000542179 MTMR6Q9Y217 621 aa10.76□□□□□ -0.69
LDHA-220ENST00000542179 STK36Q9NRP7 1315 aa10.76□□□□□ -0.69
LDHA-220ENST00000542179 MYH8P13535 1937 aa10.76□□□□□ -0.69
LDHA-220ENST00000542179 DPYSL4O14531 572 aa10.75□□□□□ -0.69
LDHA-220ENST00000542179 FMNL1O95466 1100 aaPredicted RBP10.75□□□□□ -0.69
LDHA-220ENST00000542179 EGFRP00533 1210 aa10.75□□□□□ -0.69
LDHA-220ENST00000542179 ZSCAN22P10073 491 aaPredicted RBP10.75□□□□□ -0.69
LDHA-220ENST00000542179 RXRAP19793 462 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 109.5 ms