RNA–Protein interactions for RNA: ENST00000542068.5

CNOT9-208, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CNOT9, Length 3,259 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-208ENST00000542068 MARCH10Q8NA82 808 aaPredicted RBP17.36■□□□□ 0.37
CNOT9-208ENST00000542068 NWD2Q9ULI1 1742 aa17.35■□□□□ 0.37
CNOT9-208ENST00000542068 CRACR2BQ8N4Y2 399 aaPredicted RBP17.35■□□□□ 0.37
CNOT9-208ENST00000542068 AK7Q96M32 723 aa17.35■□□□□ 0.37
CNOT9-208ENST00000542068 FAN1Q9Y2M0 1017 aa17.35■□□□□ 0.37
CNOT9-208ENST00000542068 ZMYND10O75800 440 aa17.35■□□□□ 0.37
CNOT9-208ENST00000542068 IQCA1Q86XH1 822 aa17.35■□□□□ 0.37
CNOT9-208ENST00000542068 CAPZA3Q96KX2 299 aa17.35■□□□□ 0.37
CNOT9-208ENST00000542068 C8orf37Q96NL8 207 aa17.35■□□□□ 0.37
CNOT9-208ENST00000542068 CTAGE9A4FU28 777 aa17.34■□□□□ 0.37
CNOT9-208ENST00000542068 ERVV-1B6SEH8 477 aa17.34■□□□□ 0.37
CNOT9-208ENST00000542068 RNF225M0QZC1 329 aaPredicted RBP17.34■□□□□ 0.37
CNOT9-208ENST00000542068 PLEKHA8P1O95397 391 aa17.34■□□□□ 0.37
CNOT9-208ENST00000542068 DPYDQ12882 1025 aa17.34■□□□□ 0.37
CNOT9-208ENST00000542068 NBPF5PQ86XG9 351 aaPredicted RBP17.34■□□□□ 0.37
CNOT9-208ENST00000542068 RNF41Q9H4P4 317 aaPredicted RBP17.34■□□□□ 0.37
CNOT9-208ENST00000542068 ZNF652Q9Y2D9 606 aa17.34■□□□□ 0.37
CNOT9-208ENST00000542068 FAM193AP78312 1265 aa17.34■□□□□ 0.37
CNOT9-208ENST00000542068 PTF1AQ7RTS3 328 aa17.34■□□□□ 0.37
CNOT9-208ENST00000542068 CATIPQ7Z7H3 387 aa17.34■□□□□ 0.37
CNOT9-208ENST00000542068 PAGE5Q96GU1 130 aa17.34■□□□□ 0.37
CNOT9-208ENST00000542068 GPR101Q96P66 508 aaPredicted RBP17.34■□□□□ 0.37
CNOT9-208ENST00000542068 ANKZF1Q9H8Y5 726 aa17.34■□□□□ 0.37
CNOT9-208ENST00000542068 CCDC196A0A1B0GTZ2 297 aa17.34■□□□□ 0.37
CNOT9-208ENST00000542068 DEXIO95424 95 aa17.34■□□□□ 0.37
CNOT9-208ENST00000542068 SGMS1Q86VZ5 419 aa17.34■□□□□ 0.37
CNOT9-208ENST00000542068 ANKIB1Q9P2G1 1089 aa17.34■□□□□ 0.37
CNOT9-208ENST00000542068 SRPRBQ9Y5M8 271 aaKnown RBP17.34■□□□□ 0.37
CNOT9-208ENST00000542068 A0A1B0GTH6 734 aa17.33■□□□□ 0.37
CNOT9-208ENST00000542068 TSPY2A6NKD2 308 aa17.33■□□□□ 0.37
CNOT9-208ENST00000542068 XBP1P17861 261 aa17.33■□□□□ 0.37
CNOT9-208ENST00000542068 VSNL1P62760 191 aa17.33■□□□□ 0.37
CNOT9-208ENST00000542068 SPATA1Q5VX52 437 aa17.33■□□□□ 0.37
CNOT9-208ENST00000542068 HDAC6Q9UBN7 1215 aa17.33■□□□□ 0.37
CNOT9-208ENST00000542068 CDC23Q9UJX2 597 aa17.33■□□□□ 0.37
CNOT9-208ENST00000542068 CYP2D6P10635 497 aa17.33■□□□□ 0.36
CNOT9-208ENST00000542068 FGFR2P21802 821 aa17.33■□□□□ 0.36
CNOT9-208ENST00000542068 SARSP49591 514 aaKnown RBP17.33■□□□□ 0.36
CNOT9-208ENST00000542068 FOXR1Q6PIV2 292 aa17.33■□□□□ 0.36
CNOT9-208ENST00000542068 SLC51AQ86UW1 340 aa17.33■□□□□ 0.36
CNOT9-208ENST00000542068 NOA1Q8NC60 698 aaKnown RBP17.33■□□□□ 0.36
CNOT9-208ENST00000542068 NGLY1Q96IV0 654 aa17.33■□□□□ 0.36
CNOT9-208ENST00000542068 FAM237AA0A1B0GTK4 181 aa17.32■□□□□ 0.36
CNOT9-208ENST00000542068 CAMTA2O94983 1202 aa17.32■□□□□ 0.36
CNOT9-208ENST00000542068 MCM7P33993 719 aa17.32■□□□□ 0.36
CNOT9-208ENST00000542068 GYPCP04921 128 aa17.32■□□□□ 0.36
CNOT9-208ENST00000542068 LIFRP42702 1097 aa17.32■□□□□ 0.36
CNOT9-208ENST00000542068 RABEP2Q9H5N1 569 aa17.32■□□□□ 0.36
CNOT9-208ENST00000542068 CEP131Q9UPN4 1083 aa17.32■□□□□ 0.36
CNOT9-208ENST00000542068 WDR19Q8NEZ3 1342 aa17.32■□□□□ 0.36
CNOT9-208ENST00000542068 SRGAP2O75044 1071 aa17.32■□□□□ 0.36
CNOT9-208ENST00000542068 MFAP3LO75121 409 aa17.32■□□□□ 0.36
CNOT9-208ENST00000542068 PRDX5P30044 214 aa17.32■□□□□ 0.36
CNOT9-208ENST00000542068 NLRP5P59047 1200 aa17.32■□□□□ 0.36
CNOT9-208ENST00000542068 SHISA4Q96DD7 197 aa17.32■□□□□ 0.36
CNOT9-208ENST00000542068 CHP1Q99653 195 aa17.32■□□□□ 0.36
CNOT9-208ENST00000542068 FOXP1Q9H334 677 aaPredicted RBP17.32■□□□□ 0.36
CNOT9-208ENST00000542068 MCM9Q9NXL9 1143 aa17.32■□□□□ 0.36
CNOT9-208ENST00000542068 COL18A1P39060 1754 aa17.32■□□□□ 0.36
CNOT9-208ENST00000542068 BCL9O00512 1426 aa17.32■□□□□ 0.36
CNOT9-208ENST00000542068 CTAGE15A4D2H0 777 aa17.31■□□□□ 0.36
CNOT9-208ENST00000542068 CCDC151A5D8V7 595 aa17.31■□□□□ 0.36
CNOT9-208ENST00000542068 CTAGE8P0CG41 777 aa17.31■□□□□ 0.36
CNOT9-208ENST00000542068 KRT9P35527 623 aa17.31■□□□□ 0.36
CNOT9-208ENST00000542068 CTAGE6Q86UF2 777 aa17.31■□□□□ 0.36
CNOT9-208ENST00000542068 CTAGE4Q8IX94 777 aa17.31■□□□□ 0.36
CNOT9-208ENST00000542068 GNPATO15228 680 aa17.31■□□□□ 0.36
CNOT9-208ENST00000542068 ERVK-24P63145 666 aa17.31■□□□□ 0.36
CNOT9-208ENST00000542068 MRPS25P82663 173 aaKnown RBP17.31■□□□□ 0.36
CNOT9-208ENST00000542068 PARP10Q53GL7 1025 aa17.31■□□□□ 0.36
CNOT9-208ENST00000542068 DZIP1Q86YF9 867 aaKnown RBP17.31■□□□□ 0.36
CNOT9-208ENST00000542068 ADD3Q9UEY8 706 aaKnown RBP17.31■□□□□ 0.36
CNOT9-208ENST00000542068 FEZ2Q9UHY8 353 aaPredicted RBP17.31■□□□□ 0.36
CNOT9-208ENST00000542068 ZPR1O75312 459 aa17.31■□□□□ 0.36
CNOT9-208ENST00000542068 KRT31Q15323 416 aa17.31■□□□□ 0.36
CNOT9-208ENST00000542068 HSP90B2PQ58FF3 399 aa17.31■□□□□ 0.36
CNOT9-208ENST00000542068 LEKR1Q6ZMV7 388 aa17.31■□□□□ 0.36
CNOT9-208ENST00000542068 CTCFLQ8NI51 663 aaPredicted RBP17.31■□□□□ 0.36
CNOT9-208ENST00000542068 STX8Q9UNK0 236 aa17.31■□□□□ 0.36
CNOT9-208ENST00000542068 STRCP1A6NGW2 1772 aa17.3■□□□□ 0.36
CNOT9-208ENST00000542068 RAD21O60216 631 aa17.3■□□□□ 0.36
CNOT9-208ENST00000542068 GNAT2P19087 354 aa17.3■□□□□ 0.36
CNOT9-208ENST00000542068 PTGDRQ13258 359 aa17.3■□□□□ 0.36
CNOT9-208ENST00000542068 FKBP15Q5T1M5 1219 aa17.3■□□□□ 0.36
CNOT9-208ENST00000542068 KANK3Q6NY19 840 aa17.3■□□□□ 0.36
CNOT9-208ENST00000542068 HDXQ7Z353 690 aa17.3■□□□□ 0.36
CNOT9-208ENST00000542068 CEP112Q8N8E3 955 aa17.3■□□□□ 0.36
CNOT9-208ENST00000542068 GDAQ9Y2T3 454 aa17.3■□□□□ 0.36
CNOT9-208ENST00000542068 USP5P45974 858 aa17.3■□□□□ 0.36
CNOT9-208ENST00000542068 BEND6Q5SZJ8 279 aaPredicted RBP17.3■□□□□ 0.36
CNOT9-208ENST00000542068 PIK3AP1Q6ZUJ8 805 aa17.3■□□□□ 0.36
CNOT9-208ENST00000542068 GSPT2Q8IYD1 628 aaKnown RBP17.3■□□□□ 0.36
CNOT9-208ENST00000542068 PANX2Q96RD6 677 aa17.3■□□□□ 0.36
CNOT9-208ENST00000542068 SETDB2Q96T68 719 aa17.3■□□□□ 0.36
CNOT9-208ENST00000542068 UBXN1Q04323 297 aa17.29■□□□□ 0.36
CNOT9-208ENST00000542068 CUL4BQ13620 913 aa17.29■□□□□ 0.36
CNOT9-208ENST00000542068 ENAHQ8N8S7 591 aaPredicted RBP17.29■□□□□ 0.36
CNOT9-208ENST00000542068 RASGRP4Q8TDF6 673 aa17.29■□□□□ 0.36
CNOT9-208ENST00000542068 NAPGQ99747 312 aaPredicted RBP17.29■□□□□ 0.36
CNOT9-208ENST00000542068 TRIM49BA6NDI0 452 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms