RNA–Protein interactions for RNA: ENST00000542001.5

VARS2-212, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VARS2, Length 4,064 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-212ENST00000542001 MMP1P03956 469 aa18.1■□□□□ 0.49
VARS2-212ENST00000542001 SCG2P13521 617 aa18.1■□□□□ 0.49
VARS2-212ENST00000542001 DCAF17Q5H9S7 520 aaPredicted RBP18.1■□□□□ 0.49
VARS2-212ENST00000542001 FNBP4Q8N3X1 1017 aaPredicted RBP18.1■□□□□ 0.49
VARS2-212ENST00000542001 SOWAHDA6NJG2 315 aa18.1■□□□□ 0.49
VARS2-212ENST00000542001 ZMYND10O75800 440 aa18.1■□□□□ 0.49
VARS2-212ENST00000542001 IFNAR1P17181 557 aa18.1■□□□□ 0.49
VARS2-212ENST00000542001 GNA11P29992 359 aa18.1■□□□□ 0.49
VARS2-212ENST00000542001 SP4Q02446 784 aa18.1■□□□□ 0.49
VARS2-212ENST00000542001 VEZTQ9HBM0 779 aa18.1■□□□□ 0.49
VARS2-212ENST00000542001 SLC39A2Q9NP94 309 aa18.1■□□□□ 0.49
VARS2-212ENST00000542001 PREX1Q8TCU6 1659 aa18.1■□□□□ 0.49
VARS2-212ENST00000542001 ANTXR2P58335 489 aa18.09■□□□□ 0.49
VARS2-212ENST00000542001 MRPS25P82663 173 aaKnown RBP18.09■□□□□ 0.49
VARS2-212ENST00000542001 EYA3Q99504 573 aa18.09■□□□□ 0.49
VARS2-212ENST00000542001 SYCP3Q8IZU3 236 aa18.09■□□□□ 0.49
VARS2-212ENST00000542001 BLIDQ8IZY5 108 aa18.09■□□□□ 0.49
VARS2-212ENST00000542001 LRWD1Q9UFC0 647 aa18.09■□□□□ 0.49
VARS2-212ENST00000542001 USP42Q9H9J4 1324 aaKnown RBP18.09■□□□□ 0.49
VARS2-212ENST00000542001 KRT86O43790 486 aa18.09■□□□□ 0.49
VARS2-212ENST00000542001 MSL1Q68DK7 614 aa18.09■□□□□ 0.49
VARS2-212ENST00000542001 SHC4Q6S5L8 630 aa18.09■□□□□ 0.49
VARS2-212ENST00000542001 DEPDC5O75140 1603 aa18.09■□□□□ 0.49
VARS2-212ENST00000542001 FMNL1O95466 1100 aaPredicted RBP18.08■□□□□ 0.49
VARS2-212ENST00000542001 GRIN1Q05586 938 aa18.08■□□□□ 0.49
VARS2-212ENST00000542001 ACRBPQ8NEB7 543 aa18.08■□□□□ 0.49
VARS2-212ENST00000542001 SNX29Q8TEQ0 813 aa18.08■□□□□ 0.49
VARS2-212ENST00000542001 POLD4Q9HCU8 107 aa18.08■□□□□ 0.49
VARS2-212ENST00000542001 RIPOR2Q9Y4F9 1068 aa18.08■□□□□ 0.49
VARS2-212ENST00000542001 RAPGEF1Q13905 1077 aa18.08■□□□□ 0.49
VARS2-212ENST00000542001 IQCEQ6IPM2 695 aa18.08■□□□□ 0.49
VARS2-212ENST00000542001 USP17L2Q6R6M4 530 aa18.08■□□□□ 0.49
VARS2-212ENST00000542001 MAATS1Q7Z4T9 603 aa18.08■□□□□ 0.49
VARS2-212ENST00000542001 IRX2Q9BZI1 471 aaPredicted RBP18.08■□□□□ 0.49
VARS2-212ENST00000542001 NCBP1Q09161 790 aaKnown RBP18.08■□□□□ 0.48
VARS2-212ENST00000542001 CABP7Q86V35 215 aa18.08■□□□□ 0.48
VARS2-212ENST00000542001 FAM114A1Q8IWE2 563 aa18.08■□□□□ 0.48
VARS2-212ENST00000542001 PXDNQ92626 1479 aa18.08■□□□□ 0.48
VARS2-212ENST00000542001 GSG1L2A8MUP6 293 aa18.08■□□□□ 0.48
VARS2-212ENST00000542001 ATP2C2O75185 946 aa18.08■□□□□ 0.48
VARS2-212ENST00000542001 FGFR1OPO95684 399 aaKnown RBP18.08■□□□□ 0.48
VARS2-212ENST00000542001 CYP19A1P11511 503 aaPredicted RBP18.08■□□□□ 0.48
VARS2-212ENST00000542001 CACNB1Q02641 598 aaPredicted RBP18.08■□□□□ 0.48
VARS2-212ENST00000542001 TYW1BQ6NUM6 668 aa18.08■□□□□ 0.48
VARS2-212ENST00000542001 ALS2CR12Q96Q35 445 aa18.08■□□□□ 0.48
VARS2-212ENST00000542001 SHPRHQ149N8 1683 aa18.07■□□□□ 0.48
VARS2-212ENST00000542001 UBN2Q6ZU65 1347 aa18.07■□□□□ 0.48
VARS2-212ENST00000542001 SV2BQ7L1I2 683 aa18.07■□□□□ 0.48
VARS2-212ENST00000542001 LY9Q9HBG7 655 aa18.07■□□□□ 0.48
VARS2-212ENST00000542001 RBL2Q08999 1139 aa18.07■□□□□ 0.48
VARS2-212ENST00000542001 CUL5Q93034 780 aa18.07■□□□□ 0.48
VARS2-212ENST00000542001 KCNJ18B7U540 433 aa18.07■□□□□ 0.48
VARS2-212ENST00000542001 TOM1O60784 492 aa18.07■□□□□ 0.48
VARS2-212ENST00000542001 MORC3Q14149 939 aa18.07■□□□□ 0.48
VARS2-212ENST00000542001 KCNJ12Q14500 433 aa18.07■□□□□ 0.48
VARS2-212ENST00000542001 DHX40Q8IX18 779 aaKnown RBP18.07■□□□□ 0.48
VARS2-212ENST00000542001 GGA1Q9UJY5 639 aa18.07■□□□□ 0.48
VARS2-212ENST00000542001 GDAQ9Y2T3 454 aa18.07■□□□□ 0.48
VARS2-212ENST00000542001 ECM2O94769 699 aaPredicted RBP18.06■□□□□ 0.48
VARS2-212ENST00000542001 MECOMQ03112 1051 aa18.06■□□□□ 0.48
VARS2-212ENST00000542001 IQCB1Q15051 598 aa18.06■□□□□ 0.48
VARS2-212ENST00000542001 NONOQ15233 471 aaKnown RBP eCLIP18.06■□□□□ 0.48
VARS2-212ENST00000542001 MAP9Q49MG5 647 aa18.06■□□□□ 0.48
VARS2-212ENST00000542001 FBXO38Q6PIJ6 1188 aa18.06■□□□□ 0.48
VARS2-212ENST00000542001 PLA2G4DQ86XP0 818 aa18.06■□□□□ 0.48
VARS2-212ENST00000542001 PYM1Q9BRP8 204 aaKnown RBP18.06■□□□□ 0.48
VARS2-212ENST00000542001 ADGRB2O60241 1585 aa18.06■□□□□ 0.48
VARS2-212ENST00000542001 PP2D1A8MPX8 630 aa18.06■□□□□ 0.48
VARS2-212ENST00000542001 LRRC41Q15345 812 aa18.06■□□□□ 0.48
VARS2-212ENST00000542001 HERC4Q5GLZ8 1057 aaPredicted RBP18.06■□□□□ 0.48
VARS2-212ENST00000542001 FERMT2Q96AC1 680 aa18.06■□□□□ 0.48
VARS2-212ENST00000542001 ZNF804BA4D1E1 1349 aa18.06■□□□□ 0.48
VARS2-212ENST00000542001 TBCAO75347 108 aaKnown RBP18.06■□□□□ 0.48
VARS2-212ENST00000542001 SLC16A2P36021 539 aa18.06■□□□□ 0.48
VARS2-212ENST00000542001 NAPGQ99747 312 aaPredicted RBP18.06■□□□□ 0.48
VARS2-212ENST00000542001 FBXO3Q9UK99 471 aa18.06■□□□□ 0.48
VARS2-212ENST00000542001 KIAA0825Q8IV33 1275 aa18.05■□□□□ 0.48
VARS2-212ENST00000542001 PLCD3Q8N3E9 789 aa18.05■□□□□ 0.48
VARS2-212ENST00000542001 CEP112Q8N8E3 955 aa18.05■□□□□ 0.48
VARS2-212ENST00000542001 NEK11Q8NG66 645 aa18.05■□□□□ 0.48
VARS2-212ENST00000542001 TEX33O43247 280 aa18.05■□□□□ 0.48
VARS2-212ENST00000542001 TACC1O75410 805 aa18.05■□□□□ 0.48
VARS2-212ENST00000542001 GYS2P54840 703 aa18.05■□□□□ 0.48
VARS2-212ENST00000542001 PPP1R12BO60237 982 aaPredicted RBP18.05■□□□□ 0.48
VARS2-212ENST00000542001 C2CD5Q86YS7 1000 aa18.05■□□□□ 0.48
VARS2-212ENST00000542001 SMAP1Q8IYB5 467 aaPredicted RBP18.05■□□□□ 0.48
VARS2-212ENST00000542001 WDR66Q8TBY9 1149 aa18.05■□□□□ 0.48
VARS2-212ENST00000542001 MTF1Q14872 753 aa18.04■□□□□ 0.48
VARS2-212ENST00000542001 TSGA10IPQ3SY00 556 aa18.04■□□□□ 0.48
VARS2-212ENST00000542001 REXO1Q8N1G1 1221 aaKnown RBP18.04■□□□□ 0.48
VARS2-212ENST00000542001 VGLL3A8MV65 326 aa18.04■□□□□ 0.48
VARS2-212ENST00000542001 ZEB2O60315 1214 aa18.04■□□□□ 0.48
VARS2-212ENST00000542001 PPP6R2O75170 966 aa18.04■□□□□ 0.48
VARS2-212ENST00000542001 CTNNBL1Q8WYA6 563 aaPredicted RBP18.04■□□□□ 0.48
VARS2-212ENST00000542001 COA7Q96BR5 231 aa18.04■□□□□ 0.48
VARS2-212ENST00000542001 OAS2P29728 719 aaKnown RBP18.04■□□□□ 0.48
VARS2-212ENST00000542001 BTDP43251 543 aa18.04■□□□□ 0.48
VARS2-212ENST00000542001 FAM196AQ6ZSG2 479 aa18.04■□□□□ 0.48
VARS2-212ENST00000542001 RRAGAQ7L523 313 aa18.04■□□□□ 0.48
VARS2-212ENST00000542001 ENAHQ8N8S7 591 aaPredicted RBP18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms