RNA–Protein interactions for RNA: ENST00000541967.1

ARF3-209, Transcript of ADP ribosylation factor 3, humanhuman

TSL 4

Gene ARF3, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARF3-209ENST00000541967 TMOD4Q9NZQ9 345 aa20.67■□□□□ 0.9
ARF3-209ENST00000541967 SYNPO2Q9UMS6 1093 aa20.67■□□□□ 0.9
ARF3-209ENST00000541967 COL11A1P12107 1806 aaPredicted RBP20.67■□□□□ 0.9
ARF3-209ENST00000541967 COL9A3Q14050 684 aaPredicted RBP20.66■□□□□ 0.9
ARF3-209ENST00000541967 RCSD1Q6JBY9 416 aa20.66■□□□□ 0.9
ARF3-209ENST00000541967 RALYLQ86SE5 291 aaKnown RBP20.66■□□□□ 0.9
ARF3-209ENST00000541967 ZKSCAN3Q9BRR0 538 aa20.66■□□□□ 0.9
ARF3-209ENST00000541967 RNF186Q9NXI6 227 aa20.66■□□□□ 0.9
ARF3-209ENST00000541967 AGTPBP1Q9UPW5 1226 aa20.66■□□□□ 0.9
ARF3-209ENST00000541967 SLC45A1Q9Y2W3 748 aa20.66■□□□□ 0.9
ARF3-209ENST00000541967 SNX14Q9Y5W7 946 aa20.66■□□□□ 0.9
ARF3-209ENST00000541967 ZKSCAN1P17029 563 aaPredicted RBP20.65■□□□□ 0.9
ARF3-209ENST00000541967 ANTXR2P58335 489 aa20.65■□□□□ 0.9
ARF3-209ENST00000541967 CCDC178Q5BJE1 867 aa20.65■□□□□ 0.9
ARF3-209ENST00000541967 OTUD7BQ6GQQ9 843 aa20.65■□□□□ 0.9
ARF3-209ENST00000541967 IQCA1Q86XH1 822 aa20.65■□□□□ 0.9
ARF3-209ENST00000541967 ANKS1AQ92625 1134 aa20.65■□□□□ 0.9
ARF3-209ENST00000541967 TTC14Q96N46 770 aa20.65■□□□□ 0.9
ARF3-209ENST00000541967 ZSCAN10Q96SZ4 725 aaPredicted RBP20.65■□□□□ 0.9
ARF3-209ENST00000541967 STX8Q9UNK0 236 aa20.65■□□□□ 0.9
ARF3-209ENST00000541967 A0A0G2JMZ2 1700 aa20.64■□□□□ 0.9
ARF3-209ENST00000541967 PDHXO00330 501 aa20.64■□□□□ 0.89
ARF3-209ENST00000541967 ALDH1A1P00352 501 aa20.64■□□□□ 0.89
ARF3-209ENST00000541967 VCAM1P19320 739 aa20.64■□□□□ 0.89
ARF3-209ENST00000541967 KRT32Q14532 448 aa20.64■□□□□ 0.89
ARF3-209ENST00000541967 ADCK5Q3MIX3 580 aa20.64■□□□□ 0.89
ARF3-209ENST00000541967 DGKHQ86XP1 1220 aa20.64■□□□□ 0.89
ARF3-209ENST00000541967 LRRC47Q8N1G4 583 aaKnown RBP20.64■□□□□ 0.89
ARF3-209ENST00000541967 LPAR1Q92633 364 aa20.64■□□□□ 0.89
ARF3-209ENST00000541967 CFHR5Q9BXR6 569 aa20.64■□□□□ 0.89
ARF3-209ENST00000541967 GOPCQ9HD26 462 aa20.64■□□□□ 0.89
ARF3-209ENST00000541967 SAGE1Q9NXZ1 904 aa20.64■□□□□ 0.89
ARF3-209ENST00000541967 MGAMO43451 1857 aa20.63■□□□□ 0.89
ARF3-209ENST00000541967 TNKSO95271 1327 aa20.63■□□□□ 0.89
ARF3-209ENST00000541967 HOXA7P31268 230 aaPredicted RBP20.63■□□□□ 0.89
ARF3-209ENST00000541967 SEC23AQ15436 765 aa20.63■□□□□ 0.89
ARF3-209ENST00000541967 ENAHQ8N8S7 591 aaPredicted RBP20.63■□□□□ 0.89
ARF3-209ENST00000541967 GMCL1P1Q8NEA9 526 aa20.63■□□□□ 0.89
ARF3-209ENST00000541967 NEK1Q96PY6 1258 aa20.63■□□□□ 0.89
ARF3-209ENST00000541967 TMEM47Q9BQJ4 181 aa20.63■□□□□ 0.89
ARF3-209ENST00000541967 PCDH10Q9P2E7 1040 aa20.63■□□□□ 0.89
ARF3-209ENST00000541967 F5H6K3 240 aa20.62■□□□□ 0.89
ARF3-209ENST00000541967 TOP1P11387 765 aaKnown RBP20.62■□□□□ 0.89
ARF3-209ENST00000541967 MCCP23508 829 aa20.62■□□□□ 0.89
ARF3-209ENST00000541967 KLRC3Q07444 240 aa20.62■□□□□ 0.89
ARF3-209ENST00000541967 CHST3Q7LGC8 479 aa20.62■□□□□ 0.89
ARF3-209ENST00000541967 ADGRA2Q96PE1 1338 aa20.61■□□□□ 0.89
ARF3-209ENST00000541967 WDR46O15213 610 aaKnown RBP20.61■□□□□ 0.89
ARF3-209ENST00000541967 CA12O43570 354 aa20.61■□□□□ 0.89
ARF3-209ENST00000541967 TRPA1O75762 1119 aa20.61■□□□□ 0.89
ARF3-209ENST00000541967 NDUFB10O96000 172 aa20.61■□□□□ 0.89
ARF3-209ENST00000541967 MCM5P33992 734 aa20.61■□□□□ 0.89
ARF3-209ENST00000541967 PABPC4Q13310 644 aaKnown RBP eCLIP20.61■□□□□ 0.89
ARF3-209ENST00000541967 TAF1CQ15572 869 aaPredicted RBP20.61■□□□□ 0.89
ARF3-209ENST00000541967 CATSPERGQ6ZRH7 1159 aa20.61■□□□□ 0.89
ARF3-209ENST00000541967 SPICE1Q8N0Z3 855 aa20.61■□□□□ 0.89
ARF3-209ENST00000541967 UBAC1Q9BSL1 405 aa20.61■□□□□ 0.89
ARF3-209ENST00000541967 MTA3Q9BTC8 594 aa20.61■□□□□ 0.89
ARF3-209ENST00000541967 USP17L15C9J2P7 530 aa20.6■□□□□ 0.89
ARF3-209ENST00000541967 USP17L13C9JLJ4 530 aa20.6■□□□□ 0.89
ARF3-209ENST00000541967 USP17L11C9JVI0 530 aa20.6■□□□□ 0.89
ARF3-209ENST00000541967 USP17L18D6R9N7 530 aa20.6■□□□□ 0.89
ARF3-209ENST00000541967 USP17L22D6RA61 530 aa20.6■□□□□ 0.89
ARF3-209ENST00000541967 USP17L17D6RBQ6 530 aa20.6■□□□□ 0.89
ARF3-209ENST00000541967 USP17L19D6RCP7 530 aa20.6■□□□□ 0.89
ARF3-209ENST00000541967 USP17L20D6RJB6 530 aa20.6■□□□□ 0.89
ARF3-209ENST00000541967 PRC1O43663 620 aa20.6■□□□□ 0.89
ARF3-209ENST00000541967 USP17L24Q0WX57 530 aa20.6■□□□□ 0.89
ARF3-209ENST00000541967 CRHR2Q13324 411 aa20.6■□□□□ 0.89
ARF3-209ENST00000541967 IGDCC4Q8TDY8 1250 aa20.6■□□□□ 0.89
ARF3-209ENST00000541967 BEGAINQ9BUH8 593 aa20.6■□□□□ 0.89
ARF3-209ENST00000541967 R3HDMLQ9H3Y0 253 aa20.6■□□□□ 0.89
ARF3-209ENST00000541967 RPAP3Q9H6T3 665 aaPredicted RBP20.6■□□□□ 0.89
ARF3-209ENST00000541967 CASP8AP2Q9UKL3 1982 aa20.59■□□□□ 0.89
ARF3-209ENST00000541967 WDR19Q8NEZ3 1342 aa20.59■□□□□ 0.89
ARF3-209ENST00000541967 MYH6P13533 1939 aa20.59■□□□□ 0.89
ARF3-209ENST00000541967 IFIT3O14879 490 aaKnown RBP20.59■□□□□ 0.89
ARF3-209ENST00000541967 OSBPP22059 807 aa20.59■□□□□ 0.89
ARF3-209ENST00000541967 EXOSC10Q01780 885 aaKnown RBP20.59■□□□□ 0.89
ARF3-209ENST00000541967 SLFN13Q68D06 897 aa20.59■□□□□ 0.89
ARF3-209ENST00000541967 IL17RAQ96F46 866 aa20.59■□□□□ 0.89
ARF3-209ENST00000541967 JAKMIP1Q96N16 626 aaKnown RBP20.59■□□□□ 0.89
ARF3-209ENST00000541967 PARK7Q99497 189 aaKnown RBP20.59■□□□□ 0.89
ARF3-209ENST00000541967 ASCC2Q9H1I8 757 aaPredicted RBP20.59■□□□□ 0.89
ARF3-209ENST00000541967 ZFYVE28Q9HCC9 887 aa20.59■□□□□ 0.89
ARF3-209ENST00000541967 PNMA3Q9UL41 463 aa20.59■□□□□ 0.89
ARF3-209ENST00000541967 RAD21O60216 631 aa20.58■□□□□ 0.89
ARF3-209ENST00000541967 TBC1D8O95759 1140 aa20.58■□□□□ 0.89
ARF3-209ENST00000541967 HMGB1P09429 215 aaKnown RBP20.58■□□□□ 0.89
ARF3-209ENST00000541967 CYP2C8P10632 490 aa20.58■□□□□ 0.89
ARF3-209ENST00000541967 FAM83BQ5T0W9 1011 aa20.58■□□□□ 0.89
ARF3-209ENST00000541967 IFIT1BQ5T764 474 aaKnown RBP20.58■□□□□ 0.89
ARF3-209ENST00000541967 DHX32Q7L7V1 743 aaKnown RBP20.58■□□□□ 0.89
ARF3-209ENST00000541967 GMCL1Q96IK5 515 aa20.58■□□□□ 0.89
ARF3-209ENST00000541967 TMEM87BQ96K49 555 aa20.58■□□□□ 0.89
ARF3-209ENST00000541967 SENP2Q9HC62 589 aa20.58■□□□□ 0.89
ARF3-209ENST00000541967 ZSWIM8A7E2V4 1837 aa20.57■□□□□ 0.88
ARF3-209ENST00000541967 ERICH2A1L162 156 aa20.57■□□□□ 0.88
ARF3-209ENST00000541967 SH2B2O14492 632 aaPredicted RBP20.57■□□□□ 0.88
ARF3-209ENST00000541967 ANAPC15P60006 121 aa20.57■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms