RNA–Protein interactions for RNA: ENST00000541817.5

CHFR-220, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 5

Gene CHFR, Length 758 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-220ENST00000541817 USP17L19D6RCP7 530 aa12.11□□□□□ -0.47
CHFR-220ENST00000541817 USP17L20D6RJB6 530 aa12.11□□□□□ -0.47
CHFR-220ENST00000541817 EYA2O00167 538 aa12.11□□□□□ -0.47
CHFR-220ENST00000541817 RARBP10826 455 aa12.11□□□□□ -0.47
CHFR-220ENST00000541817 USP17L24Q0WX57 530 aa12.11□□□□□ -0.47
CHFR-220ENST00000541817 ATP2B3Q16720 1220 aa12.11□□□□□ -0.47
CHFR-220ENST00000541817 CATSPERGQ6ZRH7 1159 aa12.11□□□□□ -0.47
CHFR-220ENST00000541817 ATG9AQ7Z3C6 839 aa12.11□□□□□ -0.47
CHFR-220ENST00000541817 ANKRD33Q7Z3H0 272 aa12.11□□□□□ -0.47
CHFR-220ENST00000541817 RNF180Q86T96 592 aa12.11□□□□□ -0.47
CHFR-220ENST00000541817 SIL1Q9H173 461 aa12.11□□□□□ -0.47
CHFR-220ENST00000541817 STARD7Q9NQZ5 370 aa12.11□□□□□ -0.47
CHFR-220ENST00000541817 ZBTB21Q9ULJ3 1066 aa12.11□□□□□ -0.47
CHFR-220ENST00000541817 ACLYP53396 1101 aa12.1□□□□□ -0.47
CHFR-220ENST00000541817 RASGRF1Q13972 1273 aa12.1□□□□□ -0.47
CHFR-220ENST00000541817 CSPP1Q1MSJ5 1256 aa12.1□□□□□ -0.47
CHFR-220ENST00000541817 PSRC1Q6PGN9 363 aaPredicted RBP12.1□□□□□ -0.47
CHFR-220ENST00000541817 CCDC174Q6PII3 467 aa12.1□□□□□ -0.47
CHFR-220ENST00000541817 SLF2Q8IX21 1173 aa12.1□□□□□ -0.47
CHFR-220ENST00000541817 TEX11Q8IYF3 940 aa12.1□□□□□ -0.47
CHFR-220ENST00000541817 TMEM199Q8N511 208 aa12.1□□□□□ -0.47
CHFR-220ENST00000541817 SH3RF3Q8TEJ3 882 aaPredicted RBP12.1□□□□□ -0.47
CHFR-220ENST00000541817 HLA-CQ95604 372 aa12.1□□□□□ -0.47
CHFR-220ENST00000541817 TOX2Q96NM4 488 aa12.1□□□□□ -0.47
CHFR-220ENST00000541817 FEZ1Q99689 392 aa12.1□□□□□ -0.47
CHFR-220ENST00000541817 MOV10L1Q9BXT6 1211 aaKnown RBP12.1□□□□□ -0.47
CHFR-220ENST00000541817 HERC5Q9UII4 1024 aaKnown RBP12.1□□□□□ -0.47
CHFR-220ENST00000541817 ZNFX1Q9P2E3 1918 aaKnown RBP12.09□□□□□ -0.47
CHFR-220ENST00000541817 SPDYE16A6NNV3 312 aaPredicted RBP12.09□□□□□ -0.47
CHFR-220ENST00000541817 GTPBP6O43824 516 aaPredicted RBP12.09□□□□□ -0.47
CHFR-220ENST00000541817 FGBP02675 491 aa12.09□□□□□ -0.47
CHFR-220ENST00000541817 RFX5P48382 616 aaPredicted RBP12.09□□□□□ -0.47
CHFR-220ENST00000541817 CCDC102BQ68D86 513 aa12.09□□□□□ -0.47
CHFR-220ENST00000541817 TBC1D9Q6ZT07 1266 aa12.09□□□□□ -0.47
CHFR-220ENST00000541817 ERICH6Q7L0X2 663 aa12.09□□□□□ -0.47
CHFR-220ENST00000541817 CRACR2BQ8N4Y2 399 aaPredicted RBP12.09□□□□□ -0.47
CHFR-220ENST00000541817 ZGPATQ8N5A5 531 aaKnown RBP12.09□□□□□ -0.47
CHFR-220ENST00000541817 ACER1Q8TDN7 264 aa12.09□□□□□ -0.47
CHFR-220ENST00000541817 VTI1AQ96AJ9 217 aa12.09□□□□□ -0.47
CHFR-220ENST00000541817 CDCA7LQ96GN5 454 aa12.09□□□□□ -0.47
CHFR-220ENST00000541817 MAML3Q96JK9 1138 aa12.09□□□□□ -0.47
CHFR-220ENST00000541817 IL23AQ9NPF7 189 aa12.09□□□□□ -0.47
CHFR-220ENST00000541817 PI4KBQ9UBF8 816 aa12.09□□□□□ -0.47
CHFR-220ENST00000541817 COG5Q9UP83 839 aa12.09□□□□□ -0.47
CHFR-220ENST00000541817 UMODL1Q5DID0 1318 aa12.09□□□□□ -0.47
CHFR-220ENST00000541817 TRANK1O15050 2925 aa12.08□□□□□ -0.48
CHFR-220ENST00000541817 MYADML2A6NDP7 307 aa12.08□□□□□ -0.48
CHFR-220ENST00000541817 NPM3O75607 178 aaKnown RBP12.08□□□□□ -0.48
CHFR-220ENST00000541817 GH2P01242 217 aa12.08□□□□□ -0.48
CHFR-220ENST00000541817 ERCC3P19447 782 aa12.08□□□□□ -0.48
CHFR-220ENST00000541817 EXOSC9Q06265 439 aaKnown RBP12.08□□□□□ -0.48
CHFR-220ENST00000541817 PLS1Q14651 629 aa12.08□□□□□ -0.48
CHFR-220ENST00000541817 KCNA10Q16322 511 aa12.08□□□□□ -0.48
CHFR-220ENST00000541817 MAPKAPK5Q8IW41 473 aa12.08□□□□□ -0.48
CHFR-220ENST00000541817 RPAP3Q9H6T3 665 aaPredicted RBP12.08□□□□□ -0.48
CHFR-220ENST00000541817 SAP30BPQ9UHR5 308 aaKnown RBP12.08□□□□□ -0.48
CHFR-220ENST00000541817 PALD1Q9ULE6 856 aa12.08□□□□□ -0.48
CHFR-220ENST00000541817 A0A0G2JMZ2 1700 aa12.08□□□□□ -0.48
CHFR-220ENST00000541817 ZNF521Q96K83 1311 aa12.08□□□□□ -0.48
CHFR-220ENST00000541817 ZBBXA8MT70 800 aa12.07□□□□□ -0.48
CHFR-220ENST00000541817 SEMA3EO15041 775 aa12.07□□□□□ -0.48
CHFR-220ENST00000541817 ADAMTS4O75173 837 aa12.07□□□□□ -0.48
CHFR-220ENST00000541817 ARHGEF15O94989 841 aa12.07□□□□□ -0.48
CHFR-220ENST00000541817 VCAM1P19320 739 aa12.07□□□□□ -0.48
CHFR-220ENST00000541817 SSTR3P32745 418 aaPredicted RBP12.07□□□□□ -0.48
CHFR-220ENST00000541817 CCL23P55773 120 aa12.07□□□□□ -0.48
CHFR-220ENST00000541817 SPTY2D1Q68D10 685 aaPredicted RBP12.07□□□□□ -0.48
CHFR-220ENST00000541817 PI16Q6UXB8 463 aa12.07□□□□□ -0.48
CHFR-220ENST00000541817 SPRED2Q7Z698 418 aa12.07□□□□□ -0.48
CHFR-220ENST00000541817 GJD3Q8N144 294 aa12.07□□□□□ -0.48
CHFR-220ENST00000541817 TGFBRAP1Q8WUH2 860 aa12.07□□□□□ -0.48
CHFR-220ENST00000541817 ARNTL2Q8WYA1 636 aa12.07□□□□□ -0.48
CHFR-220ENST00000541817 TRIM34Q9BYJ4 488 aa12.07□□□□□ -0.48
CHFR-220ENST00000541817 FANCIQ9NVI1 1328 aa12.07□□□□□ -0.48
CHFR-220ENST00000541817 ZNF236Q9UL36 1845 aa12.07□□□□□ -0.48
CHFR-220ENST00000541817 PGK2P07205 417 aa12.06□□□□□ -0.48
CHFR-220ENST00000541817 CA3P07451 260 aa12.06□□□□□ -0.48
CHFR-220ENST00000541817 TIMM10P62072 90 aa12.06□□□□□ -0.48
CHFR-220ENST00000541817 SAMD1Q6SPF0 538 aaPredicted RBP12.06□□□□□ -0.48
CHFR-220ENST00000541817 NCAPG2Q86XI2 1143 aa12.06□□□□□ -0.48
CHFR-220ENST00000541817 WWC1Q8IX03 1113 aa12.06□□□□□ -0.48
CHFR-220ENST00000541817 NUP133Q8WUM0 1156 aa12.06□□□□□ -0.48
CHFR-220ENST00000541817 C12orf42Q96LP6 360 aa12.06□□□□□ -0.48
CHFR-220ENST00000541817 CEP126Q9P2H0 1117 aa12.06□□□□□ -0.48
CHFR-220ENST00000541817 PCDHA11Q9Y5I1 949 aa12.06□□□□□ -0.48
CHFR-220ENST00000541817 SLC4A7Q9Y6M7 1214 aa12.06□□□□□ -0.48
CHFR-220ENST00000541817 STRNO43815 780 aa12.05□□□□□ -0.48
CHFR-220ENST00000541817 ZNF865P0CJ78 1059 aaPredicted RBP12.05□□□□□ -0.48
CHFR-220ENST00000541817 CDK7P50613 346 aa12.05□□□□□ -0.48
CHFR-220ENST00000541817 RAB3GAP1Q15042 981 aa12.05□□□□□ -0.48
CHFR-220ENST00000541817 LBX2Q6XYB7 198 aa12.05□□□□□ -0.48
CHFR-220ENST00000541817 NSUN4Q96CB9 384 aaKnown RBP12.05□□□□□ -0.48
CHFR-220ENST00000541817 SPATC1LQ9H0A9 340 aa12.05□□□□□ -0.48
CHFR-220ENST00000541817 RAI14Q9P0K7 980 aa12.05□□□□□ -0.48
CHFR-220ENST00000541817 SYNRGQ9UMZ2 1314 aa12.05□□□□□ -0.48
CHFR-220ENST00000541817 LDHCP07864 332 aa12.04□□□□□ -0.48
CHFR-220ENST00000541817 IL9P15248 144 aa12.04□□□□□ -0.48
CHFR-220ENST00000541817 POU3F3P20264 500 aaPredicted RBP12.04□□□□□ -0.48
CHFR-220ENST00000541817 CCSAPQ6IQ19 270 aaPredicted RBP12.04□□□□□ -0.48
CHFR-220ENST00000541817 FOXP4Q8IVH2 680 aaPredicted RBP12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms