RNA–Protein interactions for RNA: ENST00000541769.1

AC006065.3-201, humanhuman

TSL 5 BASIC

Gene AC006065.3, Length 419 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC006065.3-201ENST00000541769 TNFRSF21O75509 655 aa5.53□□□□□ -1.52
AC006065.3-201ENST00000541769 ALDH1A1P00352 501 aa5.53□□□□□ -1.52
AC006065.3-201ENST00000541769 USP17L7P0C7H9 530 aa5.53□□□□□ -1.52
AC006065.3-201ENST00000541769 MMRN1Q13201 1228 aa5.53□□□□□ -1.52
AC006065.3-201ENST00000541769 TNIP1Q15025 636 aa5.53□□□□□ -1.52
AC006065.3-201ENST00000541769 LRIT3Q3SXY7 679 aa5.53□□□□□ -1.52
AC006065.3-201ENST00000541769 TBC1D10BQ4KMP7 808 aaPredicted RBP5.53□□□□□ -1.52
AC006065.3-201ENST00000541769 TPTE2Q6XPS3 522 aa5.53□□□□□ -1.52
AC006065.3-201ENST00000541769 ZNF662Q6ZS27 426 aa5.53□□□□□ -1.52
AC006065.3-201ENST00000541769 MCF2L2Q86YR7 1114 aa5.53□□□□□ -1.52
AC006065.3-201ENST00000541769 ZNF295-AS1Q8N0V1 137 aa5.53□□□□□ -1.52
AC006065.3-201ENST00000541769 KDF1Q8NAX2 398 aaPredicted RBP5.53□□□□□ -1.52
AC006065.3-201ENST00000541769 SNX29Q8TEQ0 813 aa5.53□□□□□ -1.52
AC006065.3-201ENST00000541769 DCPSQ96C86 337 aaKnown RBP5.53□□□□□ -1.52
AC006065.3-201ENST00000541769 ERO1AQ96HE7 468 aa5.53□□□□□ -1.52
AC006065.3-201ENST00000541769 ZNF496Q96IT1 587 aaPredicted RBP5.53□□□□□ -1.52
AC006065.3-201ENST00000541769 GUCD1Q96NT3 240 aa5.53□□□□□ -1.52
AC006065.3-201ENST00000541769 OSBPL2Q9H1P3 480 aa5.53□□□□□ -1.52
AC006065.3-201ENST00000541769 PIF1Q9H611 641 aa5.53□□□□□ -1.52
AC006065.3-201ENST00000541769 ZNF395Q9H8N7 513 aaPredicted RBP5.53□□□□□ -1.52
AC006065.3-201ENST00000541769 EIF4ENIF1Q9NRA8 985 aaKnown RBP5.53□□□□□ -1.52
AC006065.3-201ENST00000541769 FNDC3AQ9Y2H6 1198 aaKnown RBP5.53□□□□□ -1.52
AC006065.3-201ENST00000541769 V9GY48 417 aaPredicted RBP5.53□□□□□ -1.52
AC006065.3-201ENST00000541769 RTL9Q8NET4 1388 aa5.53□□□□□ -1.52
AC006065.3-201ENST00000541769 OTOFQ9HC10 1997 aa5.53□□□□□ -1.52
AC006065.3-201ENST00000541769 IGF2BP3O00425 579 aaKnown RBP eCLIP5.52□□□□□ -1.53
AC006065.3-201ENST00000541769 PSMD14O00487 310 aa5.52□□□□□ -1.53
AC006065.3-201ENST00000541769 WNT7AO00755 349 aa5.52□□□□□ -1.53
AC006065.3-201ENST00000541769 PHACTR2O75167 634 aa5.52□□□□□ -1.53
AC006065.3-201ENST00000541769 GADD45BO75293 160 aaPredicted RBP5.52□□□□□ -1.53
AC006065.3-201ENST00000541769 BMP8BP34820 402 aa5.52□□□□□ -1.53
AC006065.3-201ENST00000541769 IDH3AP50213 366 aa5.52□□□□□ -1.53
AC006065.3-201ENST00000541769 RBL2Q08999 1139 aa5.52□□□□□ -1.53
AC006065.3-201ENST00000541769 PAK2Q13177 524 aa5.52□□□□□ -1.53
AC006065.3-201ENST00000541769 BMS1Q14692 1282 aaKnown RBP5.52□□□□□ -1.53
AC006065.3-201ENST00000541769 KIF4BQ2VIQ3 1234 aa5.52□□□□□ -1.53
AC006065.3-201ENST00000541769 SDE2Q6IQ49 451 aa5.52□□□□□ -1.53
AC006065.3-201ENST00000541769 SPNS2Q8IVW8 549 aa5.52□□□□□ -1.53
AC006065.3-201ENST00000541769 DPF3Q92784 378 aa5.52□□□□□ -1.53
AC006065.3-201ENST00000541769 GPRASP2Q96D09 838 aa5.52□□□□□ -1.53
AC006065.3-201ENST00000541769 CRAMP1Q96RY5 1269 aa5.52□□□□□ -1.53
AC006065.3-201ENST00000541769 GDF15Q99988 308 aa5.52□□□□□ -1.53
AC006065.3-201ENST00000541769 EFCC1Q9HA90 598 aa5.52□□□□□ -1.53
AC006065.3-201ENST00000541769 NPHS2Q9NP85 383 aa5.52□□□□□ -1.53
AC006065.3-201ENST00000541769 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.52□□□□□ -1.53
AC006065.3-201ENST00000541769 USP20Q9Y2K6 914 aa5.52□□□□□ -1.53
AC006065.3-201ENST00000541769 ATP6V0A2Q9Y487 856 aa5.52□□□□□ -1.53
AC006065.3-201ENST00000541769 PTCH2Q9Y6C5 1203 aa5.52□□□□□ -1.53
AC006065.3-201ENST00000541769 ZIC2O95409 532 aaPredicted RBP5.51□□□□□ -1.53
AC006065.3-201ENST00000541769 A1BGP04217 495 aa5.51□□□□□ -1.53
AC006065.3-201ENST00000541769 POLR3DP05423 398 aaPredicted RBP5.51□□□□□ -1.53
AC006065.3-201ENST00000541769 FGRP09769 529 aa5.51□□□□□ -1.53
AC006065.3-201ENST00000541769 RPS12P25398 132 aaKnown RBP5.51□□□□□ -1.53
AC006065.3-201ENST00000541769 ST13P50502 369 aaKnown RBP5.51□□□□□ -1.53
AC006065.3-201ENST00000541769 ARSDP51689 593 aa5.51□□□□□ -1.53
AC006065.3-201ENST00000541769 SLC4A8Q2Y0W8 1093 aa5.51□□□□□ -1.53
AC006065.3-201ENST00000541769 SLC9C1Q4G0N8 1177 aa5.51□□□□□ -1.53
AC006065.3-201ENST00000541769 SPRYD7Q5W111 196 aa5.51□□□□□ -1.53
AC006065.3-201ENST00000541769 NBPF10Q6P3W6 841 aaKnown RBP5.51□□□□□ -1.53
AC006065.3-201ENST00000541769 LIAT1Q6ZQX7 453 aa5.51□□□□□ -1.53
AC006065.3-201ENST00000541769 CMTR1Q8N1G2 835 aaKnown RBP5.51□□□□□ -1.53
AC006065.3-201ENST00000541769 SUPT20HQ8NEM7 779 aa5.51□□□□□ -1.53
AC006065.3-201ENST00000541769 ITPKCQ96DU7 683 aa5.51□□□□□ -1.53
AC006065.3-201ENST00000541769 HSH2DQ96JZ2 352 aa5.51□□□□□ -1.53
AC006065.3-201ENST00000541769 SUSD3Q96L08 255 aa5.51□□□□□ -1.53
AC006065.3-201ENST00000541769 CARD11Q9BXL7 1154 aa5.51□□□□□ -1.53
AC006065.3-201ENST00000541769 ZFYVE28Q9HCC9 887 aa5.51□□□□□ -1.53
AC006065.3-201ENST00000541769 NEUROD4Q9HD90 331 aa5.51□□□□□ -1.53
AC006065.3-201ENST00000541769 STAP2Q9UGK3 403 aa5.51□□□□□ -1.53
AC006065.3-201ENST00000541769 NIP7Q9Y221 180 aaKnown RBP eCLIP5.51□□□□□ -1.53
AC006065.3-201ENST00000541769 UBE2Q2LH0YL09 131 aa5.5□□□□□ -1.53
AC006065.3-201ENST00000541769 SSBP05455 408 aaKnown RBP eCLIP5.5□□□□□ -1.53
AC006065.3-201ENST00000541769 ATF4P18848 351 aaPredicted RBP5.5□□□□□ -1.53
AC006065.3-201ENST00000541769 GJA8P48165 433 aa5.5□□□□□ -1.53
AC006065.3-201ENST00000541769 CRHR2Q13324 411 aa5.5□□□□□ -1.53
AC006065.3-201ENST00000541769 C4orf17Q53FE4 359 aa5.5□□□□□ -1.53
AC006065.3-201ENST00000541769 ANGEL2Q5VTE6 544 aaKnown RBP5.5□□□□□ -1.53
AC006065.3-201ENST00000541769 PDE12Q6L8Q7 609 aaKnown RBP5.5□□□□□ -1.53
AC006065.3-201ENST00000541769 NXPE4Q6UWF7 544 aa5.5□□□□□ -1.53
AC006065.3-201ENST00000541769 Q6ZVU0 165 aa5.5□□□□□ -1.53
AC006065.3-201ENST00000541769 ZNF280CQ8ND82 737 aa5.5□□□□□ -1.53
AC006065.3-201ENST00000541769 HTATIP2Q9BUP3 242 aa5.5□□□□□ -1.53
AC006065.3-201ENST00000541769 TEX13AQ9BXU3 409 aaPredicted RBP5.5□□□□□ -1.53
AC006065.3-201ENST00000541769 BCO2Q9BYV7 579 aa5.5□□□□□ -1.53
AC006065.3-201ENST00000541769 SRCIN1Q9C0H9 1055 aa5.5□□□□□ -1.53
AC006065.3-201ENST00000541769 ELP3Q9H9T3 547 aa5.5□□□□□ -1.53
AC006065.3-201ENST00000541769 COPRSQ9NQ92 184 aa5.5□□□□□ -1.53
AC006065.3-201ENST00000541769 TTF2Q9UNY4 1162 aaKnown RBP5.5□□□□□ -1.53
AC006065.3-201ENST00000541769 ZNF652Q9Y2D9 606 aa5.5□□□□□ -1.53
AC006065.3-201ENST00000541769 NR2E3Q9Y5X4 410 aa5.5□□□□□ -1.53
AC006065.3-201ENST00000541769 ABCC4O15439 1325 aa5.49□□□□□ -1.53
AC006065.3-201ENST00000541769 PIEZO1Q92508 2521 aa5.49□□□□□ -1.53
AC006065.3-201ENST00000541769 ECM29Q5VYK3 1845 aa5.49□□□□□ -1.53
AC006065.3-201ENST00000541769 TNFRSF10AO00220 468 aa5.49□□□□□ -1.53
AC006065.3-201ENST00000541769 PHKA2P46019 1235 aa5.49□□□□□ -1.53
AC006065.3-201ENST00000541769 PIP4K2AP48426 406 aaPredicted RBP5.49□□□□□ -1.53
AC006065.3-201ENST00000541769 WDR4P57081 412 aaKnown RBP5.49□□□□□ -1.53
AC006065.3-201ENST00000541769 ZNF280AP59817 542 aaPredicted RBP5.49□□□□□ -1.53
AC006065.3-201ENST00000541769 MAP3K12Q12852 859 aa5.49□□□□□ -1.53
AC006065.3-201ENST00000541769 NFE2L2Q16236 605 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms