RNA–Protein interactions for RNA: ENST00000541366.1

COPA-205, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 2

Gene COPA, Length 616 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-205ENST00000541366 FAM47AQ5JRC9 791 aa14.46□□□□□ -0.09
COPA-205ENST00000541366 SYMPKQ92797 1274 aaKnown RBP14.46□□□□□ -0.09
COPA-205ENST00000541366 RNPC3Q96LT9 517 aaKnown RBP14.46□□□□□ -0.09
COPA-205ENST00000541366 KIAA1683Q9H0B3 1180 aa14.46□□□□□ -0.09
COPA-205ENST00000541366 TNNQ9UQP3 1299 aa14.46□□□□□ -0.09
COPA-205ENST00000541366 SEPT4O43236 478 aa14.45□□□□□ -0.1
COPA-205ENST00000541366 GNAI3P08754 354 aa14.45□□□□□ -0.1
COPA-205ENST00000541366 CYP7A1P22680 504 aa14.45□□□□□ -0.1
COPA-205ENST00000541366 USP14P54578 494 aa14.45□□□□□ -0.1
COPA-205ENST00000541366 EVX2Q03828 476 aa14.45□□□□□ -0.1
COPA-205ENST00000541366 OLFML2BQ68BL8 750 aa14.45□□□□□ -0.1
COPA-205ENST00000541366 ERCC3P19447 782 aa14.44□□□□□ -0.1
COPA-205ENST00000541366 GUCY1A2P33402 732 aa14.44□□□□□ -0.1
COPA-205ENST00000541366 ABCB5Q2M3G0 1257 aa14.44□□□□□ -0.1
COPA-205ENST00000541366 CERKLQ49MI3 558 aaPredicted RBP14.44□□□□□ -0.1
COPA-205ENST00000541366 TJAP1Q5JTD0 557 aa14.44□□□□□ -0.1
COPA-205ENST00000541366 ATF7IPQ6VMQ6 1270 aa14.44□□□□□ -0.1
COPA-205ENST00000541366 SERPINB13Q9UIV8 391 aa14.44□□□□□ -0.1
COPA-205ENST00000541366 A0A1W2PRG0 241 aa14.43□□□□□ -0.1
COPA-205ENST00000541366 TNFRSF10AO00220 468 aa14.43□□□□□ -0.1
COPA-205ENST00000541366 SHMT1P34896 483 aa14.43□□□□□ -0.1
COPA-205ENST00000541366 USP5P45974 858 aa14.43□□□□□ -0.1
COPA-205ENST00000541366 PLCD1P51178 756 aa14.43□□□□□ -0.1
COPA-205ENST00000541366 SEPT2Q15019 361 aa14.43□□□□□ -0.1
COPA-205ENST00000541366 TNNI3KQ59H18 835 aa14.43□□□□□ -0.1
COPA-205ENST00000541366 KIAA1755Q5JYT7 1200 aa14.43□□□□□ -0.1
COPA-205ENST00000541366 TRMT2AQ8IZ69 625 aaKnown RBP14.43□□□□□ -0.1
COPA-205ENST00000541366 PPM1EQ8WY54 764 aa14.43□□□□□ -0.1
COPA-205ENST00000541366 SPATC1LQ9H0A9 340 aa14.43□□□□□ -0.1
COPA-205ENST00000541366 FPGT-TNNI3KV9GXZ4 949 aa14.43□□□□□ -0.1
COPA-205ENST00000541366 NCOR1O75376 2440 aa14.43□□□□□ -0.1
COPA-205ENST00000541366 ZNF236Q9UL36 1845 aa14.43□□□□□ -0.1
COPA-205ENST00000541366 PGK1P00558 417 aa14.42□□□□□ -0.1
COPA-205ENST00000541366 CLTBP09497 229 aa14.42□□□□□ -0.1
COPA-205ENST00000541366 DNAJB2P25686 324 aa14.42□□□□□ -0.1
COPA-205ENST00000541366 CCDC158Q5M9N0 1113 aa14.42□□□□□ -0.1
COPA-205ENST00000541366 C1orf53Q5VUE5 145 aa14.42□□□□□ -0.1
COPA-205ENST00000541366 TLR7Q9NYK1 1049 aaKnown RBP14.42□□□□□ -0.1
COPA-205ENST00000541366 TACC3Q9Y6A5 838 aa14.42□□□□□ -0.1
COPA-205ENST00000541366 ZNFX1Q9P2E3 1918 aaKnown RBP14.41□□□□□ -0.1
COPA-205ENST00000541366 STRNO43815 780 aa14.41□□□□□ -0.1
COPA-205ENST00000541366 PQBP1O60828 265 aaKnown RBP14.41□□□□□ -0.1
COPA-205ENST00000541366 IDH1O75874 414 aaKnown RBP14.41□□□□□ -0.1
COPA-205ENST00000541366 GNAI2P04899 355 aa14.41□□□□□ -0.1
COPA-205ENST00000541366 RAG1P15918 1043 aa14.41□□□□□ -0.1
COPA-205ENST00000541366 TAL1P17542 331 aaPredicted RBP14.41□□□□□ -0.1
COPA-205ENST00000541366 PLS1Q14651 629 aa14.41□□□□□ -0.1
COPA-205ENST00000541366 COG2Q14746 738 aa14.41□□□□□ -0.1
COPA-205ENST00000541366 MAGEB6Q8N7X4 407 aa14.41□□□□□ -0.1
COPA-205ENST00000541366 LENG1Q96BZ8 264 aaPredicted RBP14.41□□□□□ -0.1
COPA-205ENST00000541366 MAML3Q96JK9 1138 aa14.41□□□□□ -0.1
COPA-205ENST00000541366 TANGO6Q9C0B7 1094 aa14.41□□□□□ -0.1
COPA-205ENST00000541366 EHD4Q9H223 541 aa14.41□□□□□ -0.1
COPA-205ENST00000541366 CABP5Q9NP86 173 aa14.41□□□□□ -0.1
COPA-205ENST00000541366 PHF24Q9UPV7 400 aa14.41□□□□□ -0.1
COPA-205ENST00000541366 CHD9Q3L8U1 2897 aa14.41□□□□□ -0.1
COPA-205ENST00000541366 TMEM265A0A087WTH1 108 aa14.4□□□□□ -0.1
COPA-205ENST00000541366 RARSP54136 660 aaKnown RBP14.4□□□□□ -0.1
COPA-205ENST00000541366 FPGSQ05932 587 aa14.4□□□□□ -0.1
COPA-205ENST00000541366 NCAPG2Q86XI2 1143 aa14.4□□□□□ -0.1
COPA-205ENST00000541366 CLEC10AQ8IUN9 316 aa14.4□□□□□ -0.1
COPA-205ENST00000541366 ATG4CQ96DT6 458 aa14.4□□□□□ -0.1
COPA-205ENST00000541366 ZNF576Q9H609 170 aa14.4□□□□□ -0.1
COPA-205ENST00000541366 XPNPEP3Q9NQH7 507 aa14.4□□□□□ -0.1
COPA-205ENST00000541366 DBNLQ9UJU6 430 aaKnown RBP14.4□□□□□ -0.1
COPA-205ENST00000541366 A0A0G2JMZ2 1700 aa14.4□□□□□ -0.1
COPA-205ENST00000541366 GRXCR1A8MXD5 290 aa14.39□□□□□ -0.11
COPA-205ENST00000541366 MPHOSPH10O00566 681 aaKnown RBP14.39□□□□□ -0.11
COPA-205ENST00000541366 KIAA0355O15063 1070 aa14.39□□□□□ -0.11
COPA-205ENST00000541366 PGK2P07205 417 aa14.39□□□□□ -0.11
COPA-205ENST00000541366 PBX2P40425 430 aa14.39□□□□□ -0.11
COPA-205ENST00000541366 TTC6Q86TZ1 520 aa14.39□□□□□ -0.11
COPA-205ENST00000541366 SHCBP1Q8NEM2 672 aa14.39□□□□□ -0.11
COPA-205ENST00000541366 CCDC8Q9H0W5 538 aaPredicted RBP14.39□□□□□ -0.11
COPA-205ENST00000541366 ANTXR1Q9H6X2 564 aa14.39□□□□□ -0.11
COPA-205ENST00000541366 GPR108Q9NPR9 543 aa14.39□□□□□ -0.11
COPA-205ENST00000541366 TMEM39AQ9NV64 488 aa14.39□□□□□ -0.11
COPA-205ENST00000541366 HOXC10Q9NYD6 342 aa14.39□□□□□ -0.11
COPA-205ENST00000541366 REV3LO60673 3130 aa14.38□□□□□ -0.11
COPA-205ENST00000541366 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.38□□□□□ -0.11
COPA-205ENST00000541366 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.38□□□□□ -0.11
COPA-205ENST00000541366 A0A1W2PQ45 241 aaPredicted RBP14.38□□□□□ -0.11
COPA-205ENST00000541366 A0A1W2PQY0 241 aa14.38□□□□□ -0.11
COPA-205ENST00000541366 RARBP10826 455 aa14.38□□□□□ -0.11
COPA-205ENST00000541366 FAAP100Q0VG06 881 aa14.38□□□□□ -0.11
COPA-205ENST00000541366 OS9Q13438 667 aaPredicted RBP14.38□□□□□ -0.11
COPA-205ENST00000541366 SPICE1Q8N0Z3 855 aa14.38□□□□□ -0.11
COPA-205ENST00000541366 CLUAP1Q96AJ1 413 aa14.38□□□□□ -0.11
COPA-205ENST00000541366 TIFAQ96CG3 184 aa14.38□□□□□ -0.11
COPA-205ENST00000541366 ZNF512BQ96KM6 892 aaPredicted RBP14.38□□□□□ -0.11
COPA-205ENST00000541366 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.38□□□□□ -0.113e-14■□□□□ 9.7
COPA-205ENST00000541366 PRDM12Q9H4Q4 367 aa14.38□□□□□ -0.11
COPA-205ENST00000541366 XIRP2A4UGR9 3374 aa14.38□□□□□ -0.11
COPA-205ENST00000541366 CHD7Q9P2D1 2997 aa14.37□□□□□ -0.11
COPA-205ENST00000541366 BDP1A6H8Y1 2624 aa14.37□□□□□ -0.11
COPA-205ENST00000541366 BCAR3O75815 825 aa14.37□□□□□ -0.11
COPA-205ENST00000541366 FLOT1O75955 427 aa14.37□□□□□ -0.11
COPA-205ENST00000541366 POLR3DP05423 398 aaPredicted RBP14.37□□□□□ -0.11
COPA-205ENST00000541366 CT47B1P0C2W7 299 aaPredicted RBP14.37□□□□□ -0.11
COPA-205ENST00000541366 TRIM27P14373 513 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 318.6 ms