RNA–Protein interactions for RNA: ENST00000541351.3

YBX3-211, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 717 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-211ENST00000541351 NOL10Q9BSC4 688 aaKnown RBP11.76□□□□□ -0.53
YBX3-211ENST00000541351 UPF3BQ9BZI7 483 aaKnown RBP11.76□□□□□ -0.53
YBX3-211ENST00000541351 SPC25Q9HBM1 224 aa11.76□□□□□ -0.53
YBX3-211ENST00000541351 MROH7-TTC4A0A0A0MT08 1334 aa11.76□□□□□ -0.53
YBX3-211ENST00000541351 ROBO3Q96MS0 1386 aa11.76□□□□□ -0.53
YBX3-211ENST00000541351 GPR75-ASB3A0A0A6YYF3 556 aa11.75□□□□□ -0.53
YBX3-211ENST00000541351 ZBTB22O15209 634 aa11.75□□□□□ -0.53
YBX3-211ENST00000541351 ACLYP53396 1101 aa11.75□□□□□ -0.53
YBX3-211ENST00000541351 FAM178BQ8IXR5 827 aa11.75□□□□□ -0.53
YBX3-211ENST00000541351 VTI1AQ96AJ9 217 aa11.75□□□□□ -0.53
YBX3-211ENST00000541351 MROH8Q9H579 483 aa11.75□□□□□ -0.53
YBX3-211ENST00000541351 LMCD1Q9NZU5 365 aa11.75□□□□□ -0.53
YBX3-211ENST00000541351 ABCF2Q9UG63 623 aa11.75□□□□□ -0.53
YBX3-211ENST00000541351 ATAD5Q96QE3 1844 aa11.74□□□□□ -0.53
YBX3-211ENST00000541351 PRRC2BQ5JSZ5 2229 aaKnown RBP11.74□□□□□ -0.53
YBX3-211ENST00000541351 A0A0U1RQG5 324 aaPredicted RBP11.74□□□□□ -0.53
YBX3-211ENST00000541351 KIF28PB7ZC32 967 aa11.74□□□□□ -0.53
YBX3-211ENST00000541351 CNMDO75829 334 aa11.74□□□□□ -0.53
YBX3-211ENST00000541351 PGK1P00558 417 aa11.74□□□□□ -0.53
YBX3-211ENST00000541351 SLURP2P0DP57 97 aa11.74□□□□□ -0.53
YBX3-211ENST00000541351 ATP2A2P16615 1042 aaKnown RBP11.74□□□□□ -0.53
YBX3-211ENST00000541351 CATSPERGQ6ZRH7 1159 aa11.74□□□□□ -0.53
YBX3-211ENST00000541351 FOXP4Q8IVH2 680 aaPredicted RBP11.74□□□□□ -0.53
YBX3-211ENST00000541351 CCER1Q8TC90 406 aaPredicted RBP11.74□□□□□ -0.53
YBX3-211ENST00000541351 SEZ6LQ9BYH1 1024 aa11.74□□□□□ -0.53
YBX3-211ENST00000541351 PPP1R12CQ9BZL4 782 aa11.74□□□□□ -0.53
YBX3-211ENST00000541351 SRCIN1Q9C0H9 1055 aa11.74□□□□□ -0.53
YBX3-211ENST00000541351 EMILIN3Q9NT22 766 aa11.74□□□□□ -0.53
YBX3-211ENST00000541351 HOXC10Q9NYD6 342 aa11.74□□□□□ -0.53
YBX3-211ENST00000541351 CNPY2Q9Y2B0 182 aa11.74□□□□□ -0.53
YBX3-211ENST00000541351 PDS5AQ29RF7 1337 aaKnown RBP11.74□□□□□ -0.53
YBX3-211ENST00000541351 ZBBXA8MT70 800 aa11.73□□□□□ -0.53
YBX3-211ENST00000541351 ZNF536O15090 1300 aa11.73□□□□□ -0.53
YBX3-211ENST00000541351 GFRA3O60609 400 aa11.73□□□□□ -0.53
YBX3-211ENST00000541351 PFKMP08237 780 aa11.73□□□□□ -0.53
YBX3-211ENST00000541351 RABL6Q3YEC7 729 aaPredicted RBP11.73□□□□□ -0.53
YBX3-211ENST00000541351 SAMD1Q6SPF0 538 aaPredicted RBP11.73□□□□□ -0.53
YBX3-211ENST00000541351 ERICH6Q7L0X2 663 aa11.73□□□□□ -0.53
YBX3-211ENST00000541351 OTOP2Q7RTS6 562 aa11.73□□□□□ -0.53
YBX3-211ENST00000541351 MB21D1Q8N884 522 aa11.73□□□□□ -0.53
YBX3-211ENST00000541351 MAML3Q96JK9 1138 aa11.73□□□□□ -0.53
YBX3-211ENST00000541351 MYH2Q9UKX2 1941 aa11.73□□□□□ -0.53
YBX3-211ENST00000541351 ZNF236Q9UL36 1845 aa11.73□□□□□ -0.53
YBX3-211ENST00000541351 ZBTB21Q9ULJ3 1066 aa11.73□□□□□ -0.53
YBX3-211ENST00000541351 CACNA1FO60840 1977 aa11.72□□□□□ -0.53
YBX3-211ENST00000541351 ARVCFO00192 962 aa11.72□□□□□ -0.53
YBX3-211ENST00000541351 HLA-DOAP06340 250 aa11.72□□□□□ -0.53
YBX3-211ENST00000541351 FCER1AP12319 257 aa11.72□□□□□ -0.53
YBX3-211ENST00000541351 PLCG2P16885 1265 aa11.72□□□□□ -0.53
YBX3-211ENST00000541351 RABGGTBP53611 331 aa11.72□□□□□ -0.53
YBX3-211ENST00000541351 ATP2B3Q16720 1220 aa11.72□□□□□ -0.53
YBX3-211ENST00000541351 LEXMQ3ZCV2 418 aa11.72□□□□□ -0.53
YBX3-211ENST00000541351 PRAMEF19Q5SWL8 479 aa11.72□□□□□ -0.53
YBX3-211ENST00000541351 SUCLG2Q96I99 432 aa11.72□□□□□ -0.53
YBX3-211ENST00000541351 BICC1Q9H694 974 aaKnown RBP11.72□□□□□ -0.53
YBX3-211ENST00000541351 CD320Q9NPF0 282 aa11.72□□□□□ -0.53
YBX3-211ENST00000541351 FBXO3Q9UK99 471 aa11.72□□□□□ -0.53
YBX3-211ENST00000541351 ADAMTS8Q9UP79 889 aa11.72□□□□□ -0.53
YBX3-211ENST00000541351 CHD9Q3L8U1 2897 aa11.71□□□□□ -0.53
YBX3-211ENST00000541351 F6X3S4 739 aa11.71□□□□□ -0.53
YBX3-211ENST00000541351 APAF1O14727 1248 aa11.71□□□□□ -0.53
YBX3-211ENST00000541351 CA3P07451 260 aa11.71□□□□□ -0.53
YBX3-211ENST00000541351 ACTN1P12814 892 aa11.71□□□□□ -0.53
YBX3-211ENST00000541351 RHBDL3P58872 404 aa11.71□□□□□ -0.53
YBX3-211ENST00000541351 TEX11Q8IYF3 940 aa11.71□□□□□ -0.53
YBX3-211ENST00000541351 SLC9A7Q96T83 725 aa11.71□□□□□ -0.53
YBX3-211ENST00000541351 MOV10L1Q9BXT6 1211 aaKnown RBP11.71□□□□□ -0.53
YBX3-211ENST00000541351 SPATC1LQ9H0A9 340 aa11.71□□□□□ -0.53
YBX3-211ENST00000541351 HIPK3Q9H422 1215 aa11.71□□□□□ -0.53
YBX3-211ENST00000541351 UBE2ZQ9H832 354 aaPredicted RBP11.71□□□□□ -0.53
YBX3-211ENST00000541351 BTBD7Q9P203 1132 aa11.71□□□□□ -0.53
YBX3-211ENST00000541351 CEP126Q9P2H0 1117 aa11.71□□□□□ -0.53
YBX3-211ENST00000541351 SPDYE16A6NNV3 312 aaPredicted RBP11.7□□□□□ -0.54
YBX3-211ENST00000541351 EYA2O00167 538 aa11.7□□□□□ -0.54
YBX3-211ENST00000541351 ADAMTS4O75173 837 aa11.7□□□□□ -0.54
YBX3-211ENST00000541351 BAG3O95817 575 aa11.7□□□□□ -0.54
YBX3-211ENST00000541351 VCAM1P19320 739 aa11.7□□□□□ -0.54
YBX3-211ENST00000541351 ERCC3P19447 782 aa11.7□□□□□ -0.54
YBX3-211ENST00000541351 CDK7P50613 346 aa11.7□□□□□ -0.54
YBX3-211ENST00000541351 COG2Q14746 738 aa11.7□□□□□ -0.54
YBX3-211ENST00000541351 KCNA10Q16322 511 aa11.7□□□□□ -0.54
YBX3-211ENST00000541351 SLC4A10Q6U841 1118 aa11.7□□□□□ -0.54
YBX3-211ENST00000541351 PHOSPHO2Q8TCD6 241 aa11.7□□□□□ -0.54
YBX3-211ENST00000541351 ARNTL2Q8WYA1 636 aa11.7□□□□□ -0.54
YBX3-211ENST00000541351 TSR2Q969E8 191 aaKnown RBP11.7□□□□□ -0.54
YBX3-211ENST00000541351 TINF2Q9BSI4 451 aa11.7□□□□□ -0.54
YBX3-211ENST00000541351 KIAA1683Q9H0B3 1180 aa11.7□□□□□ -0.54
YBX3-211ENST00000541351 PRKAG3Q9UGI9 489 aa11.7□□□□□ -0.54
YBX3-211ENST00000541351 FAM184BQ9ULE4 1060 aa11.7□□□□□ -0.54
YBX3-211ENST00000541351 DIS3Q9Y2L1 958 aaKnown RBP11.7□□□□□ -0.54
YBX3-211ENST00000541351 POTEB3A0JP26 581 aa11.69□□□□□ -0.54
YBX3-211ENST00000541351 COBLO75128 1261 aa11.69□□□□□ -0.54
YBX3-211ENST00000541351 GDF11O95390 407 aa11.69□□□□□ -0.54
YBX3-211ENST00000541351 SLC25A27O95847 323 aa11.69□□□□□ -0.54
YBX3-211ENST00000541351 CST5P28325 142 aaPredicted RBP11.69□□□□□ -0.54
YBX3-211ENST00000541351 CYP2C18P33260 490 aa11.69□□□□□ -0.54
YBX3-211ENST00000541351 MECOMQ03112 1051 aa11.69□□□□□ -0.54
YBX3-211ENST00000541351 RRP1BQ14684 758 aaKnown RBP11.69□□□□□ -0.54
YBX3-211ENST00000541351 ZYXQ15942 572 aaKnown RBP11.69□□□□□ -0.54
YBX3-211ENST00000541351 PTCRAQ6ISU1 281 aaPredicted RBP11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms