RNA–Protein interactions for RNA: ENST00000540896.1

CLTCL1-206, Transcript of clathrin heavy chain like 1, humanhuman

TSL 4

Gene CLTCL1, Length 477 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-206ENST00000540896 CTDSPL2Q05D32 466 aa7.85□□□□□ -1.15
CLTCL1-206ENST00000540896 PPARAQ07869 468 aa7.85□□□□□ -1.15
CLTCL1-206ENST00000540896 PICALMQ13492 652 aa7.85□□□□□ -1.15
CLTCL1-206ENST00000540896 ADCK5Q3MIX3 580 aa7.85□□□□□ -1.15
CLTCL1-206ENST00000540896 TSGA10IPQ3SY00 556 aa7.85□□□□□ -1.15
CLTCL1-206ENST00000540896 APOBEC3HQ6NTF7 200 aaKnown RBP7.85□□□□□ -1.15
CLTCL1-206ENST00000540896 CDC42EP5Q6NZY7 148 aa7.85□□□□□ -1.15
CLTCL1-206ENST00000540896 MFSD6Q6ZSS7 791 aa7.85□□□□□ -1.15
CLTCL1-206ENST00000540896 RUFY3Q7L099 469 aa7.85□□□□□ -1.15
CLTCL1-206ENST00000540896 ZNF784Q8NCA9 323 aaPredicted RBP7.85□□□□□ -1.15
CLTCL1-206ENST00000540896 NCOA7Q8NI08 942 aa7.85□□□□□ -1.15
CLTCL1-206ENST00000540896 KCNB2Q92953 911 aa7.85□□□□□ -1.15
CLTCL1-206ENST00000540896 HLA-CQ95604 372 aa7.85□□□□□ -1.15
CLTCL1-206ENST00000540896 NUDT12Q9BQG2 462 aa7.85□□□□□ -1.15
CLTCL1-206ENST00000540896 TM6SF1Q9BZW5 370 aa7.85□□□□□ -1.15
CLTCL1-206ENST00000540896 RNF41Q9H4P4 317 aaPredicted RBP7.85□□□□□ -1.15
CLTCL1-206ENST00000540896 DCP1AQ9NPI6 582 aaPredicted RBP7.85□□□□□ -1.15
CLTCL1-206ENST00000540896 PDRG1Q9NUG6 133 aa7.85□□□□□ -1.15
CLTCL1-206ENST00000540896 ARPP21Q9UBL0 812 aaPredicted RBP7.85□□□□□ -1.15
CLTCL1-206ENST00000540896 SAP30BPQ9UHR5 308 aaKnown RBP7.85□□□□□ -1.15
CLTCL1-206ENST00000540896 MYH13Q9UKX3 1938 aa7.85□□□□□ -1.15
CLTCL1-206ENST00000540896 ZNF646O15015 1829 aaPredicted RBP7.85□□□□□ -1.15
CLTCL1-206ENST00000540896 WDR90Q96KV7 1748 aa7.84□□□□□ -1.15
CLTCL1-206ENST00000540896 CYP2D7A0A087X1C5 515 aa7.84□□□□□ -1.15
CLTCL1-206ENST00000540896 HSP90AA1P07900 732 aaKnown RBP7.84□□□□□ -1.15
CLTCL1-206ENST00000540896 EPHX2P34913 555 aa7.84□□□□□ -1.15
CLTCL1-206ENST00000540896 MMP14P50281 582 aa7.84□□□□□ -1.15
CLTCL1-206ENST00000540896 RHBDL3P58872 404 aa7.84□□□□□ -1.15
CLTCL1-206ENST00000540896 ZNF280AP59817 542 aaPredicted RBP7.84□□□□□ -1.15
CLTCL1-206ENST00000540896 SLC4A8Q2Y0W8 1093 aa7.84□□□□□ -1.15
CLTCL1-206ENST00000540896 TBC1D10BQ4KMP7 808 aaPredicted RBP7.84□□□□□ -1.15
CLTCL1-206ENST00000540896 RRP12Q5JTH9 1297 aaKnown RBP7.84□□□□□ -1.15
CLTCL1-206ENST00000540896 AKNAD1Q5T1N1 836 aa7.84□□□□□ -1.15
CLTCL1-206ENST00000540896 CTR9Q6PD62 1173 aa7.84□□□□□ -1.15
CLTCL1-206ENST00000540896 NOL8Q76FK4 1167 aaKnown RBP7.84□□□□□ -1.15
CLTCL1-206ENST00000540896 PNMA8AQ86V59 439 aaPredicted RBP7.84□□□□□ -1.15
CLTCL1-206ENST00000540896 ZSCAN29Q8IWY8 852 aaPredicted RBP7.84□□□□□ -1.15
CLTCL1-206ENST00000540896 IL27Q8NEV9 243 aa7.84□□□□□ -1.15
CLTCL1-206ENST00000540896 PRMT6Q96LA8 375 aaPredicted RBP7.84□□□□□ -1.15
CLTCL1-206ENST00000540896 IPO9Q96P70 1041 aaKnown RBP7.84□□□□□ -1.15
CLTCL1-206ENST00000540896 TAF1DQ9H5J8 278 aaPredicted RBP7.84□□□□□ -1.15
CLTCL1-206ENST00000540896 TDRD3Q9H7E2 651 aaKnown RBP7.84□□□□□ -1.15
CLTCL1-206ENST00000540896 CNNM2Q9H8M5 875 aa7.84□□□□□ -1.15
CLTCL1-206ENST00000540896 MYOZ2Q9NPC6 264 aa7.84□□□□□ -1.15
CLTCL1-206ENST00000540896 ADARB2Q9NS39 739 aaKnown RBP7.84□□□□□ -1.15
CLTCL1-206ENST00000540896 GMPR2Q9P2T1 348 aaKnown RBP7.84□□□□□ -1.15
CLTCL1-206ENST00000540896 DACH1Q9UI36 760 aa7.84□□□□□ -1.15
CLTCL1-206ENST00000540896 PCDHAC2Q9Y5I4 1007 aa7.84□□□□□ -1.15
CLTCL1-206ENST00000540896 TAF6LQ9Y6J9 622 aa7.84□□□□□ -1.15
CLTCL1-206ENST00000540896 FLT1P17948 1338 aa7.83□□□□□ -1.16
CLTCL1-206ENST00000540896 SCN4AP35499 1836 aa7.83□□□□□ -1.16
CLTCL1-206ENST00000540896 DOCK2Q92608 1830 aa7.83□□□□□ -1.16
CLTCL1-206ENST00000540896 CLRN2A0PK11 232 aa7.83□□□□□ -1.16
CLTCL1-206ENST00000540896 J3QL48 77 aa7.83□□□□□ -1.16
CLTCL1-206ENST00000540896 WDHD1O75717 1129 aaPredicted RBP7.83□□□□□ -1.16
CLTCL1-206ENST00000540896 EGFRP00533 1210 aa7.83□□□□□ -1.16
CLTCL1-206ENST00000540896 CYP2D6P10635 497 aa7.83□□□□□ -1.16
CLTCL1-206ENST00000540896 RPS6KB1P23443 525 aa7.83□□□□□ -1.16
CLTCL1-206ENST00000540896 MCM5P33992 734 aa7.83□□□□□ -1.16
CLTCL1-206ENST00000540896 MCM2P49736 904 aa7.83□□□□□ -1.16
CLTCL1-206ENST00000540896 CACNB3P54284 484 aa7.83□□□□□ -1.16
CLTCL1-206ENST00000540896 GUCA2AQ02747 115 aa7.83□□□□□ -1.16
CLTCL1-206ENST00000540896 PDE4BQ07343 736 aa7.83□□□□□ -1.16
CLTCL1-206ENST00000540896 TCP10Q12799 353 aa7.83□□□□□ -1.16
CLTCL1-206ENST00000540896 TTLL12Q14166 644 aaPredicted RBP7.83□□□□□ -1.16
CLTCL1-206ENST00000540896 SBK1Q52WX2 424 aa7.83□□□□□ -1.16
CLTCL1-206ENST00000540896 EAPPQ56P03 285 aaPredicted RBP7.83□□□□□ -1.16
CLTCL1-206ENST00000540896 C12orf60Q5U649 245 aa7.83□□□□□ -1.16
CLTCL1-206ENST00000540896 STOX1Q6ZVD7 989 aa7.83□□□□□ -1.16
CLTCL1-206ENST00000540896 USP50Q70EL3 339 aaPredicted RBP7.83□□□□□ -1.16
CLTCL1-206ENST00000540896 DHX32Q7L7V1 743 aaKnown RBP7.83□□□□□ -1.16
CLTCL1-206ENST00000540896 TTC6Q86TZ1 520 aa7.83□□□□□ -1.16
CLTCL1-206ENST00000540896 TBC1D10CQ8IV04 446 aa7.83□□□□□ -1.16
CLTCL1-206ENST00000540896 SNX21Q969T3 373 aa7.83□□□□□ -1.16
CLTCL1-206ENST00000540896 KIFC2Q96AC6 838 aa7.83□□□□□ -1.16
CLTCL1-206ENST00000540896 IL17RAQ96F46 866 aa7.83□□□□□ -1.16
CLTCL1-206ENST00000540896 TRIM34Q9BYJ4 488 aa7.83□□□□□ -1.16
CLTCL1-206ENST00000540896 TBC1D2Q9BYX2 928 aa7.83□□□□□ -1.16
CLTCL1-206ENST00000540896 KRT23Q9C075 422 aa7.83□□□□□ -1.16
CLTCL1-206ENST00000540896 MKNK2Q9HBH9 465 aa7.83□□□□□ -1.16
CLTCL1-206ENST00000540896 VEZTQ9HBM0 779 aa7.83□□□□□ -1.16
CLTCL1-206ENST00000540896 ZNF287Q9HBT7 754 aa7.83□□□□□ -1.16
CLTCL1-206ENST00000540896 INCENPQ9NQS7 918 aa7.83□□□□□ -1.16
CLTCL1-206ENST00000540896 B4E1Z4 1266 aa7.82□□□□□ -1.16
CLTCL1-206ENST00000540896 TCP10L2B9ZVM9 353 aa7.82□□□□□ -1.16
CLTCL1-206ENST00000540896 K7ELQ4 463 aaPredicted RBP7.82□□□□□ -1.16
CLTCL1-206ENST00000540896 PRC1O43663 620 aa7.82□□□□□ -1.16
CLTCL1-206ENST00000540896 RANBP6O60518 1105 aaKnown RBP7.82□□□□□ -1.16
CLTCL1-206ENST00000540896 HLA-DOAP06340 250 aa7.82□□□□□ -1.16
CLTCL1-206ENST00000540896 PCP11498 1178 aaKnown RBP7.82□□□□□ -1.16
CLTCL1-206ENST00000540896 HIRAP54198 1017 aaPredicted RBP7.82□□□□□ -1.16
CLTCL1-206ENST00000540896 ANKRD1Q15327 319 aa7.82□□□□□ -1.16
CLTCL1-206ENST00000540896 KIF4BQ2VIQ3 1234 aa7.82□□□□□ -1.16
CLTCL1-206ENST00000540896 NBPF9Q3BBW0 867 aa7.82□□□□□ -1.16
CLTCL1-206ENST00000540896 CHST3Q7LGC8 479 aa7.82□□□□□ -1.16
CLTCL1-206ENST00000540896 ZNF444Q8N0Y2 327 aaPredicted RBP7.82□□□□□ -1.16
CLTCL1-206ENST00000540896 MTMR14Q8NCE2 650 aa7.82□□□□□ -1.16
CLTCL1-206ENST00000540896 TRPM4Q8TD43 1214 aa7.82□□□□□ -1.16
CLTCL1-206ENST00000540896 STAG1Q8WVM7 1258 aa7.82□□□□□ -1.16
CLTCL1-206ENST00000540896 ESR2Q92731 530 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms