RNA–Protein interactions for RNA: ENST00000540755.5

CYB561A3-216, Transcript of cytochrome b561 family member A3, humanhuman

TSL 1 (best)

Gene CYB561A3, Length 1,494 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYB561A3-216ENST00000540755 FAM83AQ86UY5 434 aa16.59■□□□□ 0.25
CYB561A3-216ENST00000540755 ZSCAN29Q8IWY8 852 aaPredicted RBP16.59■□□□□ 0.25
CYB561A3-216ENST00000540755 CCDC144CPQ8IYA2 1237 aa16.59■□□□□ 0.25
CYB561A3-216ENST00000540755 CCDC17Q96LX7 622 aa16.59■□□□□ 0.25
CYB561A3-216ENST00000540755 MAP3K14Q99558 947 aa16.59■□□□□ 0.25
CYB561A3-216ENST00000540755 DNAJC18Q9H819 358 aa16.59■□□□□ 0.25
CYB561A3-216ENST00000540755 KAT14Q9H8E8 782 aa16.59■□□□□ 0.25
CYB561A3-216ENST00000540755 ORC3Q9UBD5 711 aaPredicted RBP16.59■□□□□ 0.25
CYB561A3-216ENST00000540755 MYH15Q9Y2K3 1946 aa16.58■□□□□ 0.24
CYB561A3-216ENST00000540755 VPS37CA5D8V6 355 aaPredicted RBP16.58■□□□□ 0.24
CYB561A3-216ENST00000540755 DDX11L8A8MPP1 907 aa16.58■□□□□ 0.24
CYB561A3-216ENST00000540755 PTMSP20962 102 aa16.58■□□□□ 0.24
CYB561A3-216ENST00000540755 CRACR2BQ8N4Y2 399 aaPredicted RBP16.58■□□□□ 0.24
CYB561A3-216ENST00000540755 ATP6V1DQ9Y5K8 247 aa16.58■□□□□ 0.24
CYB561A3-216ENST00000540755 TCHHQ07283 1943 aa16.57■□□□□ 0.24
CYB561A3-216ENST00000540755 MYH4Q9Y623 1939 aa16.57■□□□□ 0.24
CYB561A3-216ENST00000540755 IGKV6D-41A0A0C4DH26 115 aa16.57■□□□□ 0.24
CYB561A3-216ENST00000540755 TCP10L2B9ZVM9 353 aa16.57■□□□□ 0.24
CYB561A3-216ENST00000540755 AKR1B1P15121 316 aa16.57■□□□□ 0.24
CYB561A3-216ENST00000540755 MAP2K2P36507 400 aa16.57■□□□□ 0.24
CYB561A3-216ENST00000540755 RBM26Q5T8P6 1007 aaKnown RBP16.57■□□□□ 0.24
CYB561A3-216ENST00000540755 FOXD4L5Q5VV16 416 aaPredicted RBP16.57■□□□□ 0.24
CYB561A3-216ENST00000540755 TATDN1Q6P1N9 297 aa16.57■□□□□ 0.24
CYB561A3-216ENST00000540755 FOXD4L4Q8WXT5 416 aaPredicted RBP16.57■□□□□ 0.24
CYB561A3-216ENST00000540755 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.57■□□□□ 0.24
CYB561A3-216ENST00000540755 TRIM34Q9BYJ4 488 aa16.57■□□□□ 0.24
CYB561A3-216ENST00000540755 GGA3Q9NZ52 723 aa16.57■□□□□ 0.24
CYB561A3-216ENST00000540755 FMNL1O95466 1100 aaPredicted RBP16.56■□□□□ 0.24
CYB561A3-216ENST00000540755 NBR1Q14596 966 aa16.56■□□□□ 0.24
CYB561A3-216ENST00000540755 NBPF9Q3BBW0 867 aa16.56■□□□□ 0.24
CYB561A3-216ENST00000540755 PPP4R3BQ5MIZ7 849 aa16.56■□□□□ 0.24
CYB561A3-216ENST00000540755 PNMA1Q8ND90 353 aa16.56■□□□□ 0.24
CYB561A3-216ENST00000540755 CTCFLQ8NI51 663 aaPredicted RBP16.56■□□□□ 0.24
CYB561A3-216ENST00000540755 CEP95Q96GE4 821 aa16.56■□□□□ 0.24
CYB561A3-216ENST00000540755 ZIC5Q96T25 663 aa16.56■□□□□ 0.24
CYB561A3-216ENST00000540755 TMEM47Q9BQJ4 181 aa16.56■□□□□ 0.24
CYB561A3-216ENST00000540755 VEZTQ9HBM0 779 aa16.56■□□□□ 0.24
CYB561A3-216ENST00000540755 HERC5Q9UII4 1024 aaKnown RBP16.56■□□□□ 0.24
CYB561A3-216ENST00000540755 GOLGA6L22H0YM25 854 aa16.55■□□□□ 0.24
CYB561A3-216ENST00000540755 H3BQV1 296 aa16.55■□□□□ 0.24
CYB561A3-216ENST00000540755 TOP1P11387 765 aaKnown RBP16.55■□□□□ 0.24
CYB561A3-216ENST00000540755 SSRP1Q08945 709 aaKnown RBP16.55■□□□□ 0.24
CYB561A3-216ENST00000540755 NBPF11Q86T75 865 aa16.55■□□□□ 0.24
CYB561A3-216ENST00000540755 TRIM22Q8IYM9 498 aa16.55■□□□□ 0.24
CYB561A3-216ENST00000540755 WASF1Q92558 559 aa16.55■□□□□ 0.24
CYB561A3-216ENST00000540755 CSRNP1Q96S65 589 aa16.55■□□□□ 0.24
CYB561A3-216ENST00000540755 MTMR4Q9NYA4 1195 aa16.55■□□□□ 0.24
CYB561A3-216ENST00000540755 TSKSQ9UJT2 592 aa16.55■□□□□ 0.24
CYB561A3-216ENST00000540755 STX8Q9UNK0 236 aa16.55■□□□□ 0.24
CYB561A3-216ENST00000540755 KIF5BP33176 963 aa16.54■□□□□ 0.24
CYB561A3-216ENST00000540755 TNNI2P48788 182 aa16.54■□□□□ 0.24
CYB561A3-216ENST00000540755 HUNKP57058 714 aa16.54■□□□□ 0.24
CYB561A3-216ENST00000540755 TNFAIP1Q13829 316 aa16.54■□□□□ 0.24
CYB561A3-216ENST00000540755 CERKLQ49MI3 558 aaPredicted RBP16.54■□□□□ 0.24
CYB561A3-216ENST00000540755 PHKBQ93100 1093 aa16.54■□□□□ 0.24
CYB561A3-216ENST00000540755 C8orf76Q96K31 380 aa16.54■□□□□ 0.24
CYB561A3-216ENST00000540755 RNF26Q9BY78 433 aaPredicted RBP16.54■□□□□ 0.24
CYB561A3-216ENST00000540755 PPFIA3O75145 1194 aa16.54■□□□□ 0.24
CYB561A3-216ENST00000540755 GRM4Q14833 912 aa16.54■□□□□ 0.24
CYB561A3-216ENST00000540755 TMTC3Q6ZXV5 915 aa16.54■□□□□ 0.24
CYB561A3-216ENST00000540755 DCPSQ96C86 337 aaKnown RBP16.54■□□□□ 0.24
CYB561A3-216ENST00000540755 SLC26A6Q9BXS9 759 aa16.54■□□□□ 0.24
CYB561A3-216ENST00000540755 ZSCAN16Q9H4T2 348 aaPredicted RBP16.54■□□□□ 0.24
CYB561A3-216ENST00000540755 GBA2Q9HCG7 927 aaPredicted RBP16.54■□□□□ 0.24
CYB561A3-216ENST00000540755 FAM155AB1AL88 458 aaPredicted RBP16.53■□□□□ 0.24
CYB561A3-216ENST00000540755 TBC1D12O60347 775 aa16.53■□□□□ 0.24
CYB561A3-216ENST00000540755 DEXIO95424 95 aa16.53■□□□□ 0.24
CYB561A3-216ENST00000540755 TTLL1O95922 423 aa16.53■□□□□ 0.24
CYB561A3-216ENST00000540755 FUT2Q10981 343 aa16.53■□□□□ 0.24
CYB561A3-216ENST00000540755 FBXO18Q8NFZ0 1043 aa16.53■□□□□ 0.24
CYB561A3-216ENST00000540755 ALG1Q9BT22 464 aa16.53■□□□□ 0.24
CYB561A3-216ENST00000540755 FAM196BA6NMK8 535 aa16.52■□□□□ 0.23
CYB561A3-216ENST00000540755 PRPF3O43395 683 aaKnown RBP16.52■□□□□ 0.23
CYB561A3-216ENST00000540755 SLURP2P0DP57 97 aa16.52■□□□□ 0.23
CYB561A3-216ENST00000540755 GNAQP50148 359 aa16.52■□□□□ 0.23
CYB561A3-216ENST00000540755 RESTQ13127 1097 aa16.52■□□□□ 0.23
CYB561A3-216ENST00000540755 NOGQ13253 232 aa16.52■□□□□ 0.23
CYB561A3-216ENST00000540755 ANGEL2Q5VTE6 544 aaKnown RBP16.52■□□□□ 0.23
CYB561A3-216ENST00000540755 MCTP1Q6DN14 999 aa16.52■□□□□ 0.23
CYB561A3-216ENST00000540755 TMEM179Q6ZVK1 233 aa16.52■□□□□ 0.23
CYB561A3-216ENST00000540755 CDCA5Q96FF9 252 aa16.52■□□□□ 0.23
CYB561A3-216ENST00000540755 BEGAINQ9BUH8 593 aa16.52■□□□□ 0.23
CYB561A3-216ENST00000540755 TMEM39BQ9GZU3 492 aa16.52■□□□□ 0.23
CYB561A3-216ENST00000540755 CNTNAP5Q8WYK1 1306 aa16.51■□□□□ 0.23
CYB561A3-216ENST00000540755 MPHOSPH10O00566 681 aaKnown RBP16.51■□□□□ 0.23
CYB561A3-216ENST00000540755 PLEKHA8P1O95397 391 aa16.51■□□□□ 0.23
CYB561A3-216ENST00000540755 SULF1Q8IWU6 871 aa16.51■□□□□ 0.23
CYB561A3-216ENST00000540755 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.51■□□□□ 0.23
CYB561A3-216ENST00000540755 PAPPA2Q9BXP8 1791 aa16.51■□□□□ 0.23
CYB561A3-216ENST00000540755 PALM3A6NDB9 673 aaPredicted RBP16.5■□□□□ 0.23
CYB561A3-216ENST00000540755 FOSBP53539 338 aa16.5■□□□□ 0.23
CYB561A3-216ENST00000540755 AKAP17AQ02040 695 aaKnown RBP16.5■□□□□ 0.23
CYB561A3-216ENST00000540755 MAP3K10Q02779 954 aa16.5■□□□□ 0.23
CYB561A3-216ENST00000540755 RASA3Q14644 834 aa16.5■□□□□ 0.23
CYB561A3-216ENST00000540755 ABCB5Q2M3G0 1257 aa16.5■□□□□ 0.23
CYB561A3-216ENST00000540755 RGMBQ6NW40 437 aa16.5■□□□□ 0.23
CYB561A3-216ENST00000540755 FERMT3Q86UX7 667 aa16.5■□□□□ 0.23
CYB561A3-216ENST00000540755 CMTR1Q8N1G2 835 aaKnown RBP16.5■□□□□ 0.23
CYB561A3-216ENST00000540755 SRBD1Q8N5C6 995 aaKnown RBP16.5■□□□□ 0.23
CYB561A3-216ENST00000540755 ABHD8Q96I13 439 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms