RNA–Protein interactions for RNA: ENST00000540608.5

NPC1-202, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 2,790 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-202ENST00000540608 LRRC10BA6NIK2 292 aa13.94□□□□□ -0.18
NPC1-202ENST00000540608 CAMTA2O94983 1202 aa13.94□□□□□ -0.18
NPC1-202ENST00000540608 CASP14P31944 242 aa13.94□□□□□ -0.18
NPC1-202ENST00000540608 ATP6V1AP38606 617 aa13.94□□□□□ -0.18
NPC1-202ENST00000540608 LONRF2Q1L5Z9 754 aa13.94□□□□□ -0.18
NPC1-202ENST00000540608 CATIPQ7Z7H3 387 aa13.94□□□□□ -0.18
NPC1-202ENST00000540608 ENAHQ8N8S7 591 aaPredicted RBP13.94□□□□□ -0.18
NPC1-202ENST00000540608 HNRNPLLQ8WVV9 542 aaKnown RBP13.94□□□□□ -0.18
NPC1-202ENST00000540608 RBM28Q9NW13 759 aaKnown RBP13.94□□□□□ -0.18
NPC1-202ENST00000540608 A0A0U1RQJ8 604 aa13.93□□□□□ -0.18
NPC1-202ENST00000540608 PRDM1O75626 825 aa13.93□□□□□ -0.18
NPC1-202ENST00000540608 ZNF569Q5MCW4 686 aa13.93□□□□□ -0.18
NPC1-202ENST00000540608 ADGRA1Q86SQ6 560 aa13.93□□□□□ -0.18
NPC1-202ENST00000540608 SMYD4Q8IYR2 804 aaPredicted RBP13.93□□□□□ -0.18
NPC1-202ENST00000540608 SDR42E1Q8WUS8 393 aa13.93□□□□□ -0.18
NPC1-202ENST00000540608 ATRIPQ8WXE1 791 aa13.93□□□□□ -0.18
NPC1-202ENST00000540608 TNFRSF25Q93038 417 aa13.93□□□□□ -0.18
NPC1-202ENST00000540608 BRMS1Q9HCU9 246 aa13.93□□□□□ -0.18
NPC1-202ENST00000540608 LIMA1Q9UHB6 759 aaKnown RBP13.93□□□□□ -0.18
NPC1-202ENST00000540608 TTF2Q9UNY4 1162 aaKnown RBP13.93□□□□□ -0.18
NPC1-202ENST00000540608 IQSEC3Q9UPP2 1182 aaPredicted RBP13.93□□□□□ -0.18
NPC1-202ENST00000540608 COL4A1P02462 1669 aa13.93□□□□□ -0.18
NPC1-202ENST00000540608 MAGEB6P1A0A0J9YX57 407 aa13.93□□□□□ -0.18
NPC1-202ENST00000540608 POTEB2H3BUK9 544 aa13.93□□□□□ -0.18
NPC1-202ENST00000540608 MAP2K7O14733 419 aa13.93□□□□□ -0.18
NPC1-202ENST00000540608 GYPCP04921 128 aa13.93□□□□□ -0.18
NPC1-202ENST00000540608 IGHMBP2P38935 993 aaKnown RBP13.93□□□□□ -0.18
NPC1-202ENST00000540608 HNRNPH2P55795 449 aaKnown RBP13.93□□□□□ -0.18
NPC1-202ENST00000540608 ZNF174Q15697 407 aa13.93□□□□□ -0.18
NPC1-202ENST00000540608 CCDC152Q4G0S7 254 aa13.93□□□□□ -0.18
NPC1-202ENST00000540608 TMTC1Q8IUR5 882 aa13.93□□□□□ -0.18
NPC1-202ENST00000540608 TXLNBQ8N3L3 684 aa13.93□□□□□ -0.18
NPC1-202ENST00000540608 PHLPP1O60346 1717 aa13.92□□□□□ -0.18
NPC1-202ENST00000540608 CTAGE9A4FU28 777 aa13.92□□□□□ -0.18
NPC1-202ENST00000540608 WNT7AO00755 349 aa13.92□□□□□ -0.18
NPC1-202ENST00000540608 NTSR2O95665 410 aa13.92□□□□□ -0.18
NPC1-202ENST00000540608 CALM1P0DP23 149 aa13.92□□□□□ -0.18
NPC1-202ENST00000540608 CALM2P0DP24 149 aa13.92□□□□□ -0.18
NPC1-202ENST00000540608 CALM3P0DP25 149 aa13.92□□□□□ -0.18
NPC1-202ENST00000540608 FXR1P51114 621 aaKnown RBP eCLIP13.92□□□□□ -0.18
NPC1-202ENST00000540608 ATP2C1P98194 919 aaPredicted RBP13.92□□□□□ -0.18
NPC1-202ENST00000540608 CHRNDQ07001 517 aa13.92□□□□□ -0.18
NPC1-202ENST00000540608 ITPK1Q13572 414 aa13.92□□□□□ -0.18
NPC1-202ENST00000540608 TTC38Q5R3I4 469 aa13.92□□□□□ -0.18
NPC1-202ENST00000540608 IFIT1BQ5T764 474 aaKnown RBP13.92□□□□□ -0.18
NPC1-202ENST00000540608 ANKZF1Q9H8Y5 726 aa13.92□□□□□ -0.18
NPC1-202ENST00000540608 RAB21Q9UL25 225 aa13.92□□□□□ -0.18
NPC1-202ENST00000540608 NIP7Q9Y221 180 aaKnown RBP eCLIP13.92□□□□□ -0.18
NPC1-202ENST00000540608 WNK3Q9BYP7 1800 aa13.92□□□□□ -0.18
NPC1-202ENST00000540608 hCG_1642624A0A1W2PR95 340 aa13.92□□□□□ -0.18
NPC1-202ENST00000540608 PLEKHA8P1O95397 391 aa13.92□□□□□ -0.18
NPC1-202ENST00000540608 USP5P45974 858 aa13.92□□□□□ -0.18
NPC1-202ENST00000540608 ST5P78524 1137 aa13.92□□□□□ -0.18
NPC1-202ENST00000540608 GPS2Q13227 327 aa13.92□□□□□ -0.18
NPC1-202ENST00000540608 IQUBQ8NA54 791 aa13.92□□□□□ -0.18
NPC1-202ENST00000540608 MSANTD4Q8NCY6 345 aa13.92□□□□□ -0.18
NPC1-202ENST00000540608 ZSWIM4Q9H7M6 989 aa13.92□□□□□ -0.18
NPC1-202ENST00000540608 PUF60Q9UHX1 559 aaKnown RBP13.92□□□□□ -0.18
NPC1-202ENST00000540608 BCL9LQ86UU0 1499 aa13.92□□□□□ -0.18
NPC1-202ENST00000540608 LOC102724428A0A0B4J2F2 783 aa13.91□□□□□ -0.18
NPC1-202ENST00000540608 SIK1P57059 783 aa13.91□□□□□ -0.18
NPC1-202ENST00000540608 TROAPQ12815 778 aa13.91□□□□□ -0.18
NPC1-202ENST00000540608 PTGDRQ13258 359 aa13.91□□□□□ -0.18
NPC1-202ENST00000540608 NPY5RQ15761 445 aa13.91□□□□□ -0.18
NPC1-202ENST00000540608 E2F4Q16254 413 aa13.91□□□□□ -0.18
NPC1-202ENST00000540608 KIF4BQ2VIQ3 1234 aa13.91□□□□□ -0.18
NPC1-202ENST00000540608 PYM1Q9BRP8 204 aaKnown RBP13.91□□□□□ -0.18
NPC1-202ENST00000540608 RWDD2AQ9UIY3 292 aa13.91□□□□□ -0.18
NPC1-202ENST00000540608 CTNND2Q9UQB3 1225 aa13.91□□□□□ -0.18
NPC1-202ENST00000540608 XDHP47989 1333 aa13.91□□□□□ -0.18
NPC1-202ENST00000540608 WTIPA6NIX2 430 aaPredicted RBP13.91□□□□□ -0.18
NPC1-202ENST00000540608 SMIM22K7EJ46 135 aa13.91□□□□□ -0.18
NPC1-202ENST00000540608 FGRP09769 529 aa13.91□□□□□ -0.18
NPC1-202ENST00000540608 KRT31Q15323 416 aa13.91□□□□□ -0.18
NPC1-202ENST00000540608 PARP10Q53GL7 1025 aa13.91□□□□□ -0.18
NPC1-202ENST00000540608 RIOK1Q9BRS2 568 aaKnown RBP13.91□□□□□ -0.18
NPC1-202ENST00000540608 N4BP3O15049 544 aa13.9□□□□□ -0.18
NPC1-202ENST00000540608 PCP11498 1178 aaKnown RBP13.9□□□□□ -0.18
NPC1-202ENST00000540608 SPAG1Q07617 926 aa13.9□□□□□ -0.18
NPC1-202ENST00000540608 BEND6Q5SZJ8 279 aaPredicted RBP13.9□□□□□ -0.18
NPC1-202ENST00000540608 RRAGBQ5VZM2 374 aa13.9□□□□□ -0.18
NPC1-202ENST00000540608 IQCA1Q86XH1 822 aa13.9□□□□□ -0.18
NPC1-202ENST00000540608 CERKQ8TCT0 537 aa13.9□□□□□ -0.18
NPC1-202ENST00000540608 MYO1AQ9UBC5 1043 aa13.9□□□□□ -0.18
NPC1-202ENST00000540608 MYH14Q7Z406 1995 aaKnown RBP13.9□□□□□ -0.18
NPC1-202ENST00000540608 DDAH1O94760 285 aa13.9□□□□□ -0.18
NPC1-202ENST00000540608 NOM1Q5C9Z4 860 aaKnown RBP13.9□□□□□ -0.18
NPC1-202ENST00000540608 PDXDC2PQ6P474 469 aa13.9□□□□□ -0.18
NPC1-202ENST00000540608 CYP26C1Q6V0L0 522 aa13.9□□□□□ -0.18
NPC1-202ENST00000540608 SLC35F6Q8N357 371 aa13.9□□□□□ -0.18
NPC1-202ENST00000540608 MSL3Q8N5Y2 521 aaKnown RBP13.9□□□□□ -0.18
NPC1-202ENST00000540608 ABHD10Q9NUJ1 306 aa13.9□□□□□ -0.18
NPC1-202ENST00000540608 ABCF2Q9UG63 623 aa13.9□□□□□ -0.18
NPC1-202ENST00000540608 GTPBP6O43824 516 aaPredicted RBP13.89□□□□□ -0.19
NPC1-202ENST00000540608 CCT6AP40227 531 aaKnown RBP13.89□□□□□ -0.19
NPC1-202ENST00000540608 TRAPPC10P48553 1259 aa13.89□□□□□ -0.19
NPC1-202ENST00000540608 ERVK-24P63145 666 aa13.89□□□□□ -0.19
NPC1-202ENST00000540608 TRIM14Q14142 442 aa13.89□□□□□ -0.19
NPC1-202ENST00000540608 DDB1Q16531 1140 aa13.89□□□□□ -0.19
NPC1-202ENST00000540608 TMTC3Q6ZXV5 915 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms