RNA–Protein interactions for RNA: ENST00000540428.1

CBX3P4-202, Transcript of chromobox 3 pseudogene 4, humanhuman

TSL 2 BASIC

Gene CBX3P4, Length 423 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P4-202ENST00000540428 NPLOC4Q8TAT6 608 aa14.51□□□□□ -0.09
CBX3P4-202ENST00000540428 SDR42E1Q8WUS8 393 aa14.51□□□□□ -0.09
CBX3P4-202ENST00000540428 UBE2OQ9C0C9 1292 aaKnown RBP14.51□□□□□ -0.09
CBX3P4-202ENST00000540428 SPATC1LQ9H0A9 340 aa14.51□□□□□ -0.09
CBX3P4-202ENST00000540428 CHMP4BQ9H444 224 aaKnown RBP14.51□□□□□ -0.09
CBX3P4-202ENST00000540428 ZBTB40Q9NUA8 1239 aa14.51□□□□□ -0.09
CBX3P4-202ENST00000540428 DNM1LO00429 736 aa14.5□□□□□ -0.09
CBX3P4-202ENST00000540428 ADD2P35612 726 aa14.5□□□□□ -0.09
CBX3P4-202ENST00000540428 EVX2Q03828 476 aa14.5□□□□□ -0.09
CBX3P4-202ENST00000540428 OLFML2BQ68BL8 750 aa14.5□□□□□ -0.09
CBX3P4-202ENST00000540428 SIRT2Q8IXJ6 389 aa14.5□□□□□ -0.09
CBX3P4-202ENST00000540428 CCDC17Q96LX7 622 aa14.5□□□□□ -0.09
CBX3P4-202ENST00000540428 MOV10L1Q9BXT6 1211 aaKnown RBP14.5□□□□□ -0.09
CBX3P4-202ENST00000540428 TANGO6Q9C0B7 1094 aa14.5□□□□□ -0.09
CBX3P4-202ENST00000540428 SH2D4AQ9H788 454 aa14.5□□□□□ -0.09
CBX3P4-202ENST00000540428 PAG1Q9NWQ8 432 aa14.5□□□□□ -0.09
CBX3P4-202ENST00000540428 LAMA3Q16787 3333 aa14.49□□□□□ -0.09
CBX3P4-202ENST00000540428 NAV1Q8NEY1 1877 aa14.49□□□□□ -0.09
CBX3P4-202ENST00000540428 CYBAP13498 195 aa14.49□□□□□ -0.09
CBX3P4-202ENST00000540428 ATP5JP18859 108 aa14.49□□□□□ -0.09
CBX3P4-202ENST00000540428 ADORA2AP29274 412 aa14.49□□□□□ -0.09
CBX3P4-202ENST00000540428 CNGA1P29973 690 aa14.49□□□□□ -0.09
CBX3P4-202ENST00000540428 DSG3P32926 999 aa14.49□□□□□ -0.09
CBX3P4-202ENST00000540428 CYP2C19P33261 490 aa14.49□□□□□ -0.09
CBX3P4-202ENST00000540428 DPP9Q86TI2 863 aa14.49□□□□□ -0.09
CBX3P4-202ENST00000540428 ABRAQ8N0Z2 381 aa14.49□□□□□ -0.09
CBX3P4-202ENST00000540428 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.49□□□□□ -0.09
CBX3P4-202ENST00000540428 MROH8Q9H579 483 aa14.49□□□□□ -0.09
CBX3P4-202ENST00000540428 ARMT1Q9H993 441 aa14.49□□□□□ -0.09
CBX3P4-202ENST00000540428 ARHGEF10LQ9HCE6 1279 aa14.49□□□□□ -0.09
CBX3P4-202ENST00000540428 SLC5A4Q9NY91 659 aa14.49□□□□□ -0.09
CBX3P4-202ENST00000540428 TMX2Q9Y320 296 aa14.49□□□□□ -0.09
CBX3P4-202ENST00000540428 APBB1O00213 710 aa14.48□□□□□ -0.09
CBX3P4-202ENST00000540428 MBD4O95243 580 aa14.48□□□□□ -0.09
CBX3P4-202ENST00000540428 CYP2D6P10635 497 aa14.48□□□□□ -0.09
CBX3P4-202ENST00000540428 ERCC3P19447 782 aa14.48□□□□□ -0.09
CBX3P4-202ENST00000540428 ICA1Q05084 483 aa14.48□□□□□ -0.09
CBX3P4-202ENST00000540428 UBE3CQ15386 1083 aa14.48□□□□□ -0.09
CBX3P4-202ENST00000540428 C12orf60Q5U649 245 aa14.48□□□□□ -0.09
CBX3P4-202ENST00000540428 SIAH1Q8IUQ4 282 aa14.48□□□□□ -0.09
CBX3P4-202ENST00000540428 AMOTL1Q8IY63 956 aa14.48□□□□□ -0.09
CBX3P4-202ENST00000540428 SLC44A5Q8NCS7 719 aa14.48□□□□□ -0.09
CBX3P4-202ENST00000540428 SLC17A8Q8NDX2 589 aa14.48□□□□□ -0.09
CBX3P4-202ENST00000540428 TRPV1Q8NER1 839 aa14.48□□□□□ -0.09
CBX3P4-202ENST00000540428 HAUS7Q99871 368 aa14.48□□□□□ -0.09
CBX3P4-202ENST00000540428 SENP6Q9GZR1 1112 aaPredicted RBP14.48□□□□□ -0.09
CBX3P4-202ENST00000540428 BOLA2Q9H3K6 86 aa14.48□□□□□ -0.09
CBX3P4-202ENST00000540428 VCPKMTQ9H867 229 aa14.48□□□□□ -0.09
CBX3P4-202ENST00000540428 ZNF236Q9UL36 1845 aa14.48□□□□□ -0.09
CBX3P4-202ENST00000540428 WDR46O15213 610 aaKnown RBP14.47□□□□□ -0.09
CBX3P4-202ENST00000540428 PRKAB2O43741 272 aa14.47□□□□□ -0.09
CBX3P4-202ENST00000540428 AKR1B1P15121 316 aa14.47□□□□□ -0.09
CBX3P4-202ENST00000540428 KIAA1755Q5JYT7 1200 aa14.47□□□□□ -0.09
CBX3P4-202ENST00000540428 DEFB123Q8N688 67 aa14.47□□□□□ -0.09
CBX3P4-202ENST00000540428 ARRDC4Q8NCT1 418 aa14.47□□□□□ -0.09
CBX3P4-202ENST00000540428 DYNLL2Q96FJ2 89 aa14.47□□□□□ -0.09
CBX3P4-202ENST00000540428 DDRGK1Q96HY6 314 aa14.47□□□□□ -0.09
CBX3P4-202ENST00000540428 COG6Q9Y2V7 657 aa14.47□□□□□ -0.09
CBX3P4-202ENST00000540428 SEPT4O43236 478 aa14.46□□□□□ -0.09
CBX3P4-202ENST00000540428 FLOT1O75955 427 aa14.46□□□□□ -0.09
CBX3P4-202ENST00000540428 SLC25A27O95847 323 aa14.46□□□□□ -0.09
CBX3P4-202ENST00000540428 CDK8P49336 464 aa14.46□□□□□ -0.09
CBX3P4-202ENST00000540428 MDM2Q00987 491 aaPredicted RBP14.46□□□□□ -0.09
CBX3P4-202ENST00000540428 C16orf86Q6ZW13 317 aa14.46□□□□□ -0.09
CBX3P4-202ENST00000540428 LBHD1Q9BQE6 289 aaPredicted RBP14.46□□□□□ -0.09
CBX3P4-202ENST00000540428 A0A0G2JMZ2 1700 aa14.45□□□□□ -0.1
CBX3P4-202ENST00000540428 USP17L12C9JPN9 530 aa14.45□□□□□ -0.1
CBX3P4-202ENST00000540428 USP17L21D6R901 530 aa14.45□□□□□ -0.1
CBX3P4-202ENST00000540428 COBLO75128 1261 aa14.45□□□□□ -0.1
CBX3P4-202ENST00000540428 DIEXFQ68CQ4 756 aaKnown RBP14.45□□□□□ -0.1
CBX3P4-202ENST00000540428 ZSCAN25Q6NSZ9 544 aa14.45□□□□□ -0.1
CBX3P4-202ENST00000540428 NCAPG2Q86XI2 1143 aa14.45□□□□□ -0.1
CBX3P4-202ENST00000540428 SPICE1Q8N0Z3 855 aa14.45□□□□□ -0.1
CBX3P4-202ENST00000540428 ATG4CQ96DT6 458 aa14.45□□□□□ -0.1
CBX3P4-202ENST00000540428 KANSL2Q9H9L4 492 aa14.45□□□□□ -0.1
CBX3P4-202ENST00000540428 PRKAG2Q9UGJ0 569 aa14.45□□□□□ -0.1
CBX3P4-202ENST00000540428 NRBP1Q9UHY1 535 aa14.45□□□□□ -0.1
CBX3P4-202ENST00000540428 ADAMTS5Q9UNA0 930 aa14.45□□□□□ -0.1
CBX3P4-202ENST00000540428 STXBP5LQ9Y2K9 1186 aa14.45□□□□□ -0.1
CBX3P4-202ENST00000540428 KBTBD13C9JR72 458 aa14.44□□□□□ -0.1
CBX3P4-202ENST00000540428 FCER1AP12319 257 aa14.44□□□□□ -0.1
CBX3P4-202ENST00000540428 ATN1P54259 1190 aaPredicted RBP14.44□□□□□ -0.1
CBX3P4-202ENST00000540428 RTP1P59025 263 aa14.44□□□□□ -0.1
CBX3P4-202ENST00000540428 PLS1Q14651 629 aa14.44□□□□□ -0.1
CBX3P4-202ENST00000540428 SLFNL1Q499Z3 407 aa14.44□□□□□ -0.1
CBX3P4-202ENST00000540428 CLEC10AQ8IUN9 316 aa14.44□□□□□ -0.1
CBX3P4-202ENST00000540428 MAML3Q96JK9 1138 aa14.44□□□□□ -0.1
CBX3P4-202ENST00000540428 MTMR10Q9NXD2 777 aa14.44□□□□□ -0.1
CBX3P4-202ENST00000540428 SLC4A4Q9Y6R1 1079 aa14.44□□□□□ -0.1
CBX3P4-202ENST00000540428 FRMPD3Q5JV73 1810 aa14.43□□□□□ -0.1
CBX3P4-202ENST00000540428 CYP2D7A0A087X1C5 515 aa14.43□□□□□ -0.1
CBX3P4-202ENST00000540428 EEF2P13639 858 aaKnown RBP14.43□□□□□ -0.1
CBX3P4-202ENST00000540428 COPB2P35606 906 aa14.43□□□□□ -0.1
CBX3P4-202ENST00000540428 TMEM132BQ14DG7 1078 aa14.43□□□□□ -0.1
CBX3P4-202ENST00000540428 SNX17Q15036 470 aa14.43□□□□□ -0.1
CBX3P4-202ENST00000540428 GJC2Q5T442 439 aaPredicted RBP14.43□□□□□ -0.1
CBX3P4-202ENST00000540428 C1orf53Q5VUE5 145 aa14.43□□□□□ -0.1
CBX3P4-202ENST00000540428 FAM109BQ6ICB4 259 aaPredicted RBP14.43□□□□□ -0.1
CBX3P4-202ENST00000540428 CTR9Q6PD62 1173 aa14.43□□□□□ -0.1
CBX3P4-202ENST00000540428 SLC39A5Q6ZMH5 540 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms