RNA–Protein interactions for RNA: ENST00000540166.5

DDB1-217, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 3,906 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-217ENST00000540166 MICALCLQ6ZW33 695 aa9.82□□□□□ -0.84
DDB1-217ENST00000540166 KLHDC4Q8TBB5 520 aa9.82□□□□□ -0.84
DDB1-217ENST00000540166 RABEP2Q9H5N1 569 aa9.82□□□□□ -0.84
DDB1-217ENST00000540166 RBM28Q9NW13 759 aaKnown RBP9.82□□□□□ -0.84
DDB1-217ENST00000540166 FAM53CQ9NYF3 392 aa9.82□□□□□ -0.84
DDB1-217ENST00000540166 DONSONQ9NYP3 566 aa9.82□□□□□ -0.84
DDB1-217ENST00000540166 ANGEL1Q9UNK9 670 aaKnown RBP9.82□□□□□ -0.84
DDB1-217ENST00000540166 TTF2Q9UNY4 1162 aaKnown RBP9.82□□□□□ -0.84
DDB1-217ENST00000540166 AKAP2Q9Y2D5 859 aa9.82□□□□□ -0.84
DDB1-217ENST00000540166 SALL3Q9BXA9 1300 aa9.82□□□□□ -0.84
DDB1-217ENST00000540166 CCDC175P0C221 793 aa9.82□□□□□ -0.84
DDB1-217ENST00000540166 SATB1Q01826 763 aa9.82□□□□□ -0.84
DDB1-217ENST00000540166 CHRNDQ07001 517 aa9.82□□□□□ -0.84
DDB1-217ENST00000540166 KIF22Q14807 665 aa9.82□□□□□ -0.84
DDB1-217ENST00000540166 MFSD14BQ5SR56 506 aa9.82□□□□□ -0.84
DDB1-217ENST00000540166 CTCFLQ8NI51 663 aaPredicted RBP9.82□□□□□ -0.84
DDB1-217ENST00000540166 FAM76AQ8TAV0 307 aa9.82□□□□□ -0.84
DDB1-217ENST00000540166 CEP89Q96ST8 783 aa9.82□□□□□ -0.84
DDB1-217ENST00000540166 JPH2Q9BR39 696 aaPredicted RBP9.82□□□□□ -0.84
DDB1-217ENST00000540166 HMG20BQ9P0W2 317 aa9.82□□□□□ -0.84
DDB1-217ENST00000540166 LRP2BPQ9P2M1 347 aa9.82□□□□□ -0.84
DDB1-217ENST00000540166 PPP2R2CQ9Y2T4 447 aa9.82□□□□□ -0.84
DDB1-217ENST00000540166 HSP90AA4PQ58FG1 418 aa9.82□□□□□ -0.84
DDB1-217ENST00000540166 BEND3Q5T5X7 828 aa9.82□□□□□ -0.84
DDB1-217ENST00000540166 EDC3Q96F86 508 aaKnown RBP9.82□□□□□ -0.84
DDB1-217ENST00000540166 MED4Q9NPJ6 270 aa9.82□□□□□ -0.84
DDB1-217ENST00000540166 A0A1B0GVL5 298 aa9.81□□□□□ -0.84
DDB1-217ENST00000540166 CLRN2A0PK11 232 aa9.81□□□□□ -0.84
DDB1-217ENST00000540166 CCT5P48643 541 aa9.81□□□□□ -0.84
DDB1-217ENST00000540166 SCNN1DP51172 638 aa9.81□□□□□ -0.84
DDB1-217ENST00000540166 NOGQ13253 232 aa9.81□□□□□ -0.84
DDB1-217ENST00000540166 A0A0D9SFI3 127 aa9.81□□□□□ -0.84
DDB1-217ENST00000540166 CTAGE9A4FU28 777 aa9.81□□□□□ -0.84
DDB1-217ENST00000540166 IREB2P48200 963 aaKnown RBP9.81□□□□□ -0.84
DDB1-217ENST00000540166 MMP14P50281 582 aa9.81□□□□□ -0.84
DDB1-217ENST00000540166 CYP4F22Q6NT55 531 aa9.81□□□□□ -0.84
DDB1-217ENST00000540166 TTLL11Q8NHH1 800 aa9.81□□□□□ -0.84
DDB1-217ENST00000540166 TBC1D22AQ8WUA7 517 aa9.81□□□□□ -0.84
DDB1-217ENST00000540166 ZNF594Q96JF6 807 aaPredicted RBP9.81□□□□□ -0.84
DDB1-217ENST00000540166 MAST3O60307 1309 aa9.81□□□□□ -0.84
DDB1-217ENST00000540166 RAD21O60216 631 aa9.81□□□□□ -0.84
DDB1-217ENST00000540166 LDHCP07864 332 aa9.81□□□□□ -0.84
DDB1-217ENST00000540166 POLA2Q14181 598 aa9.81□□□□□ -0.84
DDB1-217ENST00000540166 ZNF569Q5MCW4 686 aa9.81□□□□□ -0.84
DDB1-217ENST00000540166 SPTY2D1Q68D10 685 aaPredicted RBP9.81□□□□□ -0.84
DDB1-217ENST00000540166 RSBN1LQ6PCB5 846 aaPredicted RBP9.81□□□□□ -0.84
DDB1-217ENST00000540166 APOBEC3FQ8IUX4 373 aaKnown RBP9.81□□□□□ -0.84
DDB1-217ENST00000540166 CPLX3Q8WVH0 158 aa9.81□□□□□ -0.84
DDB1-217ENST00000540166 EAF2Q96CJ1 260 aaPredicted RBP9.81□□□□□ -0.84
DDB1-217ENST00000540166 NDUFB9Q9Y6M9 179 aa9.81□□□□□ -0.84
DDB1-217ENST00000540166 CAPN7Q9Y6W3 813 aa9.81□□□□□ -0.84
DDB1-217ENST00000540166 U3KPZ7 1027 aaPredicted RBP9.81□□□□□ -0.84
DDB1-217ENST00000540166 SASH3O75995 380 aa9.8□□□□□ -0.84
DDB1-217ENST00000540166 SASH1O94885 1247 aa9.8□□□□□ -0.84
DDB1-217ENST00000540166 IPO7O95373 1038 aaKnown RBP9.8□□□□□ -0.84
DDB1-217ENST00000540166 PRR29P0C7W0 189 aa9.8□□□□□ -0.84
DDB1-217ENST00000540166 SCARF1Q14162 830 aa9.8□□□□□ -0.84
DDB1-217ENST00000540166 NECTIN1Q15223 517 aa9.8□□□□□ -0.84
DDB1-217ENST00000540166 CRY2Q49AN0 593 aa9.8□□□□□ -0.84
DDB1-217ENST00000540166 TTC39AQ5SRH9 613 aa9.8□□□□□ -0.84
DDB1-217ENST00000540166 SAMD1Q6SPF0 538 aaPredicted RBP9.8□□□□□ -0.84
DDB1-217ENST00000540166 ZC3H15Q8WU90 426 aaKnown RBP9.8□□□□□ -0.84
DDB1-217ENST00000540166 DPF2Q92785 391 aa9.8□□□□□ -0.84
DDB1-217ENST00000540166 PGBD1Q96JS3 809 aa9.8□□□□□ -0.84
DDB1-217ENST00000540166 MRC1P22897 1456 aa9.8□□□□□ -0.84
DDB1-217ENST00000540166 A0A1B0GUA9 196 aa9.8□□□□□ -0.84
DDB1-217ENST00000540166 PES1O00541 588 aaKnown RBP9.8□□□□□ -0.84
DDB1-217ENST00000540166 EZRP15311 586 aaKnown RBP9.8□□□□□ -0.84
DDB1-217ENST00000540166 GBP2P32456 591 aaPredicted RBP9.8□□□□□ -0.84
DDB1-217ENST00000540166 AGBL3Q8NEM8 1001 aa9.8□□□□□ -0.84
DDB1-217ENST00000540166 MAP4K1Q92918 833 aa9.8□□□□□ -0.84
DDB1-217ENST00000540166 FUT8Q9BYC5 575 aa9.8□□□□□ -0.84
DDB1-217ENST00000540166 MINPP1Q9UNW1 487 aa9.8□□□□□ -0.84
DDB1-217ENST00000540166 CTDP1Q9Y5B0 961 aaPredicted RBP9.8□□□□□ -0.84
DDB1-217ENST00000540166 C5P01031 1676 aa9.8□□□□□ -0.84
DDB1-217ENST00000540166 TCHHQ07283 1943 aa9.8□□□□□ -0.84
DDB1-217ENST00000540166 POLR3DP05423 398 aaPredicted RBP9.8□□□□□ -0.84
DDB1-217ENST00000540166 FILIP1LQ4L180 1135 aa9.8□□□□□ -0.84
DDB1-217ENST00000540166 ARMCX5Q6P1M9 558 aa9.8□□□□□ -0.84
DDB1-217ENST00000540166 CCDC129Q6ZRS4 1044 aa9.8□□□□□ -0.84
DDB1-217ENST00000540166 SRGAP1Q7Z6B7 1085 aa9.8□□□□□ -0.84
DDB1-217ENST00000540166 FMNL3Q8IVF7 1028 aa9.8□□□□□ -0.84
DDB1-217ENST00000540166 DHX58Q96C10 678 aa9.8□□□□□ -0.84
DDB1-217ENST00000540166 RREB1Q92766 1687 aa9.8□□□□□ -0.84
DDB1-217ENST00000540166 GOLGA6L7A0A1B0GV03 622 aa9.79□□□□□ -0.84
DDB1-217ENST00000540166 TRAF5O00463 557 aa9.79□□□□□ -0.84
DDB1-217ENST00000540166 NEDD9Q14511 834 aa9.79□□□□□ -0.84
DDB1-217ENST00000540166 PDIA6Q15084 440 aa9.79□□□□□ -0.84
DDB1-217ENST00000540166 C3orf67Q6ZVT6 689 aa9.79□□□□□ -0.84
DDB1-217ENST00000540166 CRACR2BQ8N4Y2 399 aaPredicted RBP9.79□□□□□ -0.84
DDB1-217ENST00000540166 BCAS4Q8TDM0 211 aa9.79□□□□□ -0.84
DDB1-217ENST00000540166 POTEIP0CG38 1075 aa9.79□□□□□ -0.84
DDB1-217ENST00000540166 POTEJP0CG39 1038 aa9.79□□□□□ -0.84
DDB1-217ENST00000540166 SSR1P43307 286 aaKnown RBP9.79□□□□□ -0.84
DDB1-217ENST00000540166 JMYQ8N9B5 988 aa9.79□□□□□ -0.84
DDB1-217ENST00000540166 TEKT1Q969V4 418 aa9.79□□□□□ -0.84
DDB1-217ENST00000540166 NDUFAB1O14561 156 aa9.79□□□□□ -0.84
DDB1-217ENST00000540166 RNF40O75150 1001 aa9.79□□□□□ -0.84
DDB1-217ENST00000540166 PSEN1P49768 467 aa9.79□□□□□ -0.84
DDB1-217ENST00000540166 MYL5Q02045 173 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms