RNA–Protein interactions for RNA: ENST00000539784.1

TSPAN9-IT1-201, TSPAN9 intronic transcript 1, humanhuman

TSL 4 BASIC

Gene TSPAN9-IT1, Length 562 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-IT1-201ENST00000539784 FSD1Q9BTV5 496 aa15.28■□□□□ 0.04
TSPAN9-IT1-201ENST00000539784 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.28■□□□□ 0.04
TSPAN9-IT1-201ENST00000539784 BTBD7Q9P203 1132 aa15.28■□□□□ 0.04
TSPAN9-IT1-201ENST00000539784 MKI67P46013 3256 aaKnown RBP15.27■□□□□ 0.04
TSPAN9-IT1-201ENST00000539784 RAD21O60216 631 aa15.27■□□□□ 0.04
TSPAN9-IT1-201ENST00000539784 ZKSCAN1P17029 563 aaPredicted RBP15.27■□□□□ 0.04
TSPAN9-IT1-201ENST00000539784 TDO2P48775 406 aa15.27■□□□□ 0.04
TSPAN9-IT1-201ENST00000539784 LRRFIP1Q32MZ4 808 aaKnown RBP15.27■□□□□ 0.04
TSPAN9-IT1-201ENST00000539784 SIAH1Q8IUQ4 282 aa15.27■□□□□ 0.04
TSPAN9-IT1-201ENST00000539784 SEC62Q99442 399 aaKnown RBP15.27■□□□□ 0.04
TSPAN9-IT1-201ENST00000539784 SH2D4AQ9H788 454 aa15.27■□□□□ 0.04
TSPAN9-IT1-201ENST00000539784 HMX1Q9NP08 348 aaPredicted RBP15.27■□□□□ 0.04
TSPAN9-IT1-201ENST00000539784 PAK6Q9NQU5 681 aaPredicted RBP15.27■□□□□ 0.04
TSPAN9-IT1-201ENST00000539784 EEF2P13639 858 aaKnown RBP15.26■□□□□ 0.03
TSPAN9-IT1-201ENST00000539784 RGS2P41220 211 aa15.26■□□□□ 0.03
TSPAN9-IT1-201ENST00000539784 COG2Q14746 738 aa15.26■□□□□ 0.03
TSPAN9-IT1-201ENST00000539784 CCL14Q16627 93 aa15.26■□□□□ 0.03
TSPAN9-IT1-201ENST00000539784 MORN1Q5T089 497 aa15.26■□□□□ 0.03
TSPAN9-IT1-201ENST00000539784 LBX2Q6XYB7 198 aa15.26■□□□□ 0.03
TSPAN9-IT1-201ENST00000539784 VCPKMTQ9H867 229 aa15.26■□□□□ 0.03
TSPAN9-IT1-201ENST00000539784 MKNK2Q9HBH9 465 aa15.26■□□□□ 0.03
TSPAN9-IT1-201ENST00000539784 EPB41L4AQ9HCS5 686 aaPredicted RBP15.26■□□□□ 0.03
TSPAN9-IT1-201ENST00000539784 TMX2Q9Y320 296 aa15.26■□□□□ 0.03
TSPAN9-IT1-201ENST00000539784 IVNS1ABPQ9Y6Y0 642 aa15.26■□□□□ 0.03
TSPAN9-IT1-201ENST00000539784 RPTORQ8N122 1335 aa15.25■□□□□ 0.03
TSPAN9-IT1-201ENST00000539784 FLOT1O75955 427 aa15.25■□□□□ 0.03
TSPAN9-IT1-201ENST00000539784 PRKAR2AP13861 404 aaKnown RBP15.25■□□□□ 0.03
TSPAN9-IT1-201ENST00000539784 PLS1Q14651 629 aa15.25■□□□□ 0.03
TSPAN9-IT1-201ENST00000539784 SBK1Q52WX2 424 aa15.25■□□□□ 0.03
TSPAN9-IT1-201ENST00000539784 LPAR1Q92633 364 aa15.25■□□□□ 0.03
TSPAN9-IT1-201ENST00000539784 GCC1Q96CN9 775 aa15.25■□□□□ 0.03
TSPAN9-IT1-201ENST00000539784 APBA2Q99767 749 aa15.25■□□□□ 0.03
TSPAN9-IT1-201ENST00000539784 HTATIP2Q9BUP3 242 aa15.25■□□□□ 0.03
TSPAN9-IT1-201ENST00000539784 KANSL2Q9H9L4 492 aa15.25■□□□□ 0.03
TSPAN9-IT1-201ENST00000539784 HOXC10Q9NYD6 342 aa15.25■□□□□ 0.03
TSPAN9-IT1-201ENST00000539784 H0YGN5 161 aa15.24■□□□□ 0.03
TSPAN9-IT1-201ENST00000539784 XRCC5P13010 732 aaKnown RBP15.24■□□□□ 0.03
TSPAN9-IT1-201ENST00000539784 GNAT2P19087 354 aa15.24■□□□□ 0.03
TSPAN9-IT1-201ENST00000539784 RASA1P20936 1047 aa15.24■□□□□ 0.03
TSPAN9-IT1-201ENST00000539784 MAP2K5Q13163 448 aa15.24■□□□□ 0.03
TSPAN9-IT1-201ENST00000539784 GIMAP6Q6P9H5 292 aa15.24■□□□□ 0.03
TSPAN9-IT1-201ENST00000539784 UBE2Q1Q7Z7E8 422 aa15.24■□□□□ 0.03
TSPAN9-IT1-201ENST00000539784 USP6NLQ92738 828 aa15.24■□□□□ 0.03
TSPAN9-IT1-201ENST00000539784 ATG4CQ96DT6 458 aa15.24■□□□□ 0.03
TSPAN9-IT1-201ENST00000539784 SALL3Q9BXA9 1300 aa15.23■□□□□ 0.03
TSPAN9-IT1-201ENST00000539784 SLC15A5A6NIM6 579 aa15.23■□□□□ 0.03
TSPAN9-IT1-201ENST00000539784 PATL2C9JE40 543 aaKnown RBP15.23■□□□□ 0.03
TSPAN9-IT1-201ENST00000539784 WDR46O15213 610 aaKnown RBP15.23■□□□□ 0.03
TSPAN9-IT1-201ENST00000539784 PRDM1O75626 825 aa15.23■□□□□ 0.03
TSPAN9-IT1-201ENST00000539784 SLC34A2O95436 690 aa15.23■□□□□ 0.03
TSPAN9-IT1-201ENST00000539784 PTPREP23469 700 aa15.23■□□□□ 0.03
TSPAN9-IT1-201ENST00000539784 DSG3P32926 999 aa15.23■□□□□ 0.03
TSPAN9-IT1-201ENST00000539784 CACNB2Q08289 660 aaPredicted RBP15.23■□□□□ 0.03
TSPAN9-IT1-201ENST00000539784 HDAC1Q13547 482 aaPredicted RBP15.23■□□□□ 0.03
TSPAN9-IT1-201ENST00000539784 TRMT44Q8IYL2 757 aaKnown RBP15.23■□□□□ 0.03
TSPAN9-IT1-201ENST00000539784 IFNL3Q8IZI9 196 aa15.23■□□□□ 0.03
TSPAN9-IT1-201ENST00000539784 DIS3LQ8TF46 1054 aaKnown RBP15.23■□□□□ 0.03
TSPAN9-IT1-201ENST00000539784 PAWRQ96IZ0 340 aaKnown RBP15.23■□□□□ 0.03
TSPAN9-IT1-201ENST00000539784 MOV10L1Q9BXT6 1211 aaKnown RBP15.23■□□□□ 0.03
TSPAN9-IT1-201ENST00000539784 SPATC1LQ9H0A9 340 aa15.23■□□□□ 0.03
TSPAN9-IT1-201ENST00000539784 CRISPLD2Q9H0B8 497 aa15.23■□□□□ 0.03
TSPAN9-IT1-201ENST00000539784 GOPCQ9HD26 462 aa15.23■□□□□ 0.03
TSPAN9-IT1-201ENST00000539784 ZMYM1Q5SVZ6 1142 aa15.22■□□□□ 0.03
TSPAN9-IT1-201ENST00000539784 MAP3K21Q5TCX8 1036 aa15.22■□□□□ 0.03
TSPAN9-IT1-201ENST00000539784 CCDC129Q6ZRS4 1044 aa15.22■□□□□ 0.03
TSPAN9-IT1-201ENST00000539784 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.22■□□□□ 0.03
TSPAN9-IT1-201ENST00000539784 NACAP1Q9BZK3 213 aa15.22■□□□□ 0.03
TSPAN9-IT1-201ENST00000539784 NAPBQ9H115 298 aa15.22■□□□□ 0.03
TSPAN9-IT1-201ENST00000539784 FBXO28Q9NVF7 368 aa15.22■□□□□ 0.03
TSPAN9-IT1-201ENST00000539784 ROBO3Q96MS0 1386 aa15.22■□□□□ 0.03
TSPAN9-IT1-201ENST00000539784 ERCC3P19447 782 aa15.21■□□□□ 0.03
TSPAN9-IT1-201ENST00000539784 CCND3P30281 292 aaPredicted RBP15.21■□□□□ 0.03
TSPAN9-IT1-201ENST00000539784 HABP4Q5JVS0 413 aaKnown RBP15.21■□□□□ 0.03
TSPAN9-IT1-201ENST00000539784 FAM83BQ5T0W9 1011 aa15.21■□□□□ 0.03
TSPAN9-IT1-201ENST00000539784 B4GALNT3Q6L9W6 998 aa15.21■□□□□ 0.03
TSPAN9-IT1-201ENST00000539784 NCAPG2Q86XI2 1143 aa15.21■□□□□ 0.03
TSPAN9-IT1-201ENST00000539784 ZNF444Q8N0Y2 327 aaPredicted RBP15.21■□□□□ 0.03
TSPAN9-IT1-201ENST00000539784 LNPKQ9C0E8 428 aa15.21■□□□□ 0.03
TSPAN9-IT1-201ENST00000539784 FLRT1Q9NZU1 646 aa15.21■□□□□ 0.03
TSPAN9-IT1-201ENST00000539784 A0A0G2JMZ2 1700 aa15.2■□□□□ 0.02
TSPAN9-IT1-201ENST00000539784 ADORA2AP29274 412 aa15.2■□□□□ 0.02
TSPAN9-IT1-201ENST00000539784 PDE1AP54750 535 aa15.2■□□□□ 0.02
TSPAN9-IT1-201ENST00000539784 GRB14Q14449 540 aa15.2■□□□□ 0.02
TSPAN9-IT1-201ENST00000539784 MFSD14CQ5VZR4 134 aa15.2■□□□□ 0.02
TSPAN9-IT1-201ENST00000539784 NECAB2Q7Z6G3 386 aa15.2■□□□□ 0.02
TSPAN9-IT1-201ENST00000539784 DPP9Q86TI2 863 aa15.2■□□□□ 0.02
TSPAN9-IT1-201ENST00000539784 MB21D1Q8N884 522 aa15.2■□□□□ 0.02
TSPAN9-IT1-201ENST00000539784 EXOC6Q8TAG9 804 aa15.2■□□□□ 0.02
TSPAN9-IT1-201ENST00000539784 NPLOC4Q8TAT6 608 aa15.2■□□□□ 0.02
TSPAN9-IT1-201ENST00000539784 EVI5LQ96CN4 794 aa15.2■□□□□ 0.02
TSPAN9-IT1-201ENST00000539784 NUP88Q99567 741 aaPredicted RBP15.2■□□□□ 0.02
TSPAN9-IT1-201ENST00000539784 ZNF287Q9HBT7 754 aa15.2■□□□□ 0.02
TSPAN9-IT1-201ENST00000539784 CLIP2Q9UDT6 1046 aa15.2■□□□□ 0.02
TSPAN9-IT1-201ENST00000539784 COLQQ9Y215 455 aaPredicted RBP15.2■□□□□ 0.02
TSPAN9-IT1-201ENST00000539784 RLFQ13129 1914 aa15.19■□□□□ 0.02
TSPAN9-IT1-201ENST00000539784 EVI5O60447 810 aa15.19■□□□□ 0.02
TSPAN9-IT1-201ENST00000539784 CAPN2P17655 700 aa15.19■□□□□ 0.02
TSPAN9-IT1-201ENST00000539784 CNGA1P29973 690 aa15.19■□□□□ 0.02
TSPAN9-IT1-201ENST00000539784 CYP2C19P33261 490 aa15.19■□□□□ 0.02
TSPAN9-IT1-201ENST00000539784 RWDD1Q9H446 243 aaPredicted RBP15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms