RNA–Protein interactions for RNA: ENST00000539712.5

DDB1-215, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,020 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-215ENST00000539712 ROBO3Q96MS0 1386 aa20.1■□□□□ 0.81
DDB1-215ENST00000539712 XRCC5P13010 732 aaKnown RBP20.1■□□□□ 0.81
DDB1-215ENST00000539712 EEF2P13639 858 aaKnown RBP20.1■□□□□ 0.81
DDB1-215ENST00000539712 RASA1P20936 1047 aa20.1■□□□□ 0.81
DDB1-215ENST00000539712 AAMPQ13685 434 aa20.1■□□□□ 0.81
DDB1-215ENST00000539712 TRIB2Q92519 343 aa20.1■□□□□ 0.81
DDB1-215ENST00000539712 RANBP2P49792 3224 aaKnown RBP20.09■□□□□ 0.81
DDB1-215ENST00000539712 PATL2C9JE40 543 aaKnown RBP20.09■□□□□ 0.81
DDB1-215ENST00000539712 FOXP2O15409 715 aa20.09■□□□□ 0.81
DDB1-215ENST00000539712 HMGCRP04035 888 aa20.09■□□□□ 0.81
DDB1-215ENST00000539712 GNAT2P19087 354 aa20.09■□□□□ 0.81
DDB1-215ENST00000539712 CYP2B6P20813 491 aa20.09■□□□□ 0.81
DDB1-215ENST00000539712 PDE1AP54750 535 aa20.09■□□□□ 0.81
DDB1-215ENST00000539712 COG2Q14746 738 aa20.09■□□□□ 0.81
DDB1-215ENST00000539712 PLEKHH3Q7Z736 793 aa20.09■□□□□ 0.81
DDB1-215ENST00000539712 SMC5Q8IY18 1101 aa20.09■□□□□ 0.81
DDB1-215ENST00000539712 SPICE1Q8N0Z3 855 aa20.09■□□□□ 0.81
DDB1-215ENST00000539712 LPAR1Q92633 364 aa20.09■□□□□ 0.81
DDB1-215ENST00000539712 DEFB118Q96PH6 123 aa20.09■□□□□ 0.81
DDB1-215ENST00000539712 NUDT12Q9BQG2 462 aa20.09■□□□□ 0.81
DDB1-215ENST00000539712 FSD1Q9BTV5 496 aa20.09■□□□□ 0.81
DDB1-215ENST00000539712 CRISPLD2Q9H0B8 497 aa20.09■□□□□ 0.81
DDB1-215ENST00000539712 VCPKMTQ9H867 229 aa20.09■□□□□ 0.81
DDB1-215ENST00000539712 KANSL2Q9H9L4 492 aa20.09■□□□□ 0.81
DDB1-215ENST00000539712 GREB1LQ9C091 1923 aaPredicted RBP20.09■□□□□ 0.81
DDB1-215ENST00000539712 MINDY4BA8MYZ0 360 aa20.08■□□□□ 0.81
DDB1-215ENST00000539712 IGHDP01880 384 aa20.08■□□□□ 0.81
DDB1-215ENST00000539712 MAP3K21Q5TCX8 1036 aa20.08■□□□□ 0.81
DDB1-215ENST00000539712 IFNL3Q8IZI9 196 aa20.08■□□□□ 0.81
DDB1-215ENST00000539712 EXOC6Q8TAG9 804 aa20.08■□□□□ 0.81
DDB1-215ENST00000539712 SOCS4Q8WXH5 440 aa20.08■□□□□ 0.81
DDB1-215ENST00000539712 ARHGEF10LQ9HCE6 1279 aa20.08■□□□□ 0.81
DDB1-215ENST00000539712 HOXC10Q9NYD6 342 aa20.08■□□□□ 0.81
DDB1-215ENST00000539712 CCL14Q16627 93 aa20.07■□□□□ 0.8
DDB1-215ENST00000539712 LRRFIP1Q32MZ4 808 aaKnown RBP20.07■□□□□ 0.8
DDB1-215ENST00000539712 STK11IPQ8N1F8 1099 aa20.07■□□□□ 0.8
DDB1-215ENST00000539712 IGKV6D-41A0A0C4DH26 115 aa20.06■□□□□ 0.8
DDB1-215ENST00000539712 DSG3P32926 999 aa20.06■□□□□ 0.8
DDB1-215ENST00000539712 CCNA1P78396 465 aa20.06■□□□□ 0.8
DDB1-215ENST00000539712 TANGO6Q9C0B7 1094 aa20.06■□□□□ 0.8
DDB1-215ENST00000539712 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.06■□□□□ 0.8
DDB1-215ENST00000539712 RPTORQ8N122 1335 aa20.05■□□□□ 0.8
DDB1-215ENST00000539712 A0A0G2JMZ2 1700 aa20.05■□□□□ 0.8
DDB1-215ENST00000539712 APPP05067 770 aa20.05■□□□□ 0.8
DDB1-215ENST00000539712 PTPREP23469 700 aa20.05■□□□□ 0.8
DDB1-215ENST00000539712 TDO2P48775 406 aa20.05■□□□□ 0.8
DDB1-215ENST00000539712 CCDC129Q6ZRS4 1044 aa20.05■□□□□ 0.8
DDB1-215ENST00000539712 EVI5LQ96CN4 794 aa20.05■□□□□ 0.8
DDB1-215ENST00000539712 MOV10L1Q9BXT6 1211 aaKnown RBP20.05■□□□□ 0.8
DDB1-215ENST00000539712 LNPKQ9C0E8 428 aa20.05■□□□□ 0.8
DDB1-215ENST00000539712 SH2D4AQ9H788 454 aa20.05■□□□□ 0.8
DDB1-215ENST00000539712 ADAMTS5Q9UNA0 930 aa20.05■□□□□ 0.8
DDB1-215ENST00000539712 DNAH12Q6ZR08 3092 aa20.05■□□□□ 0.8
DDB1-215ENST00000539712 WDR46O15213 610 aaKnown RBP20.04■□□□□ 0.8
DDB1-215ENST00000539712 IGHA2P01877 340 aa20.04■□□□□ 0.8
DDB1-215ENST00000539712 RGS2P41220 211 aa20.04■□□□□ 0.8
DDB1-215ENST00000539712 ATP2B2Q01814 1243 aa20.04■□□□□ 0.8
DDB1-215ENST00000539712 MAP2K5Q13163 448 aa20.04■□□□□ 0.8
DDB1-215ENST00000539712 GRB14Q14449 540 aa20.04■□□□□ 0.8
DDB1-215ENST00000539712 CCAR1Q8IX12 1150 aaKnown RBP20.04■□□□□ 0.8
DDB1-215ENST00000539712 ATG4CQ96DT6 458 aa20.04■□□□□ 0.8
DDB1-215ENST00000539712 MKNK2Q9HBH9 465 aa20.04■□□□□ 0.8
DDB1-215ENST00000539712 FBXO28Q9NVF7 368 aa20.04■□□□□ 0.8
DDB1-215ENST00000539712 FLRT1Q9NZU1 646 aa20.04■□□□□ 0.8
DDB1-215ENST00000539712 PARP14Q460N5 1801 aa20.04■□□□□ 0.8
DDB1-215ENST00000539712 SLC15A5A6NIM6 579 aa20.03■□□□□ 0.8
DDB1-215ENST00000539712 PRDM1O75626 825 aa20.03■□□□□ 0.8
DDB1-215ENST00000539712 FLOT1O75955 427 aa20.03■□□□□ 0.8
DDB1-215ENST00000539712 FARP2O94887 1054 aaPredicted RBP20.03■□□□□ 0.8
DDB1-215ENST00000539712 TFRCP02786 760 aaKnown RBP20.03■□□□□ 0.8
DDB1-215ENST00000539712 HOXC6P09630 235 aa20.03■□□□□ 0.8
DDB1-215ENST00000539712 PRKAR2AP13861 404 aaKnown RBP20.03■□□□□ 0.8
DDB1-215ENST00000539712 MNX1P50219 401 aaPredicted RBP20.03■□□□□ 0.8
DDB1-215ENST00000539712 CACNB2Q08289 660 aaPredicted RBP20.03■□□□□ 0.8
DDB1-215ENST00000539712 APBA2Q99767 749 aa20.03■□□□□ 0.8
DDB1-215ENST00000539712 SPATC1LQ9H0A9 340 aa20.03■□□□□ 0.8
DDB1-215ENST00000539712 RWDD1Q9H446 243 aaPredicted RBP20.03■□□□□ 0.8
DDB1-215ENST00000539712 HMX1Q9NP08 348 aaPredicted RBP20.03■□□□□ 0.8
DDB1-215ENST00000539712 NYAP2Q9P242 653 aa20.03■□□□□ 0.8
DDB1-215ENST00000539712 ZBTB47Q9UFB7 747 aaPredicted RBP20.03■□□□□ 0.8
DDB1-215ENST00000539712 CAPN2P17655 700 aa20.02■□□□□ 0.8
DDB1-215ENST00000539712 NUCB1Q02818 461 aa20.02■□□□□ 0.8
DDB1-215ENST00000539712 VPS53Q5VIR6 699 aa20.02■□□□□ 0.8
DDB1-215ENST00000539712 B4GALNT3Q6L9W6 998 aa20.02■□□□□ 0.8
DDB1-215ENST00000539712 TRMT44Q8IYL2 757 aaKnown RBP20.02■□□□□ 0.8
DDB1-215ENST00000539712 MB21D1Q8N884 522 aa20.02■□□□□ 0.8
DDB1-215ENST00000539712 TACC3Q9Y6A5 838 aa20.02■□□□□ 0.8
DDB1-215ENST00000539712 H0YGN5 161 aa20.01■□□□□ 0.79
DDB1-215ENST00000539712 ZKSCAN1P17029 563 aaPredicted RBP20.01■□□□□ 0.79
DDB1-215ENST00000539712 ERCC3P19447 782 aa20.01■□□□□ 0.79
DDB1-215ENST00000539712 PPARAQ07869 468 aa20.01■□□□□ 0.79
DDB1-215ENST00000539712 TMEM132BQ14DG7 1078 aa20.01■□□□□ 0.79
DDB1-215ENST00000539712 WDR78Q5VTH9 848 aa20.01■□□□□ 0.79
DDB1-215ENST00000539712 SHCBP1Q8NEM2 672 aa20.01■□□□□ 0.79
DDB1-215ENST00000539712 NPLOC4Q8TAT6 608 aa20.01■□□□□ 0.79
DDB1-215ENST00000539712 MKL1Q969V6 931 aa20.01■□□□□ 0.79
DDB1-215ENST00000539712 FAM227BQ96M60 508 aa20.01■□□□□ 0.79
DDB1-215ENST00000539712 NACAP1Q9BZK3 213 aa20.01■□□□□ 0.79
DDB1-215ENST00000539712 SUPT16HQ9Y5B9 1047 aaKnown RBP20.01■□□□□ 0.79
DDB1-215ENST00000539712 FAM83BQ5T0W9 1011 aa20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms