RNA–Protein interactions for RNA: ENST00000539599.5

UBE3B-210, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best)

Gene UBE3B, Length 2,763 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-210ENST00000539599 NRDCO43847 1150 aa16.02■□□□□ 0.15
UBE3B-210ENST00000539599 PLCD1P51178 756 aa16.02■□□□□ 0.15
UBE3B-210ENST00000539599 PIP4K2BP78356 416 aa16.02■□□□□ 0.15
UBE3B-210ENST00000539599 CUL4BQ13620 913 aa16.02■□□□□ 0.15
UBE3B-210ENST00000539599 UBE4AQ14139 1066 aa16.02■□□□□ 0.15
UBE3B-210ENST00000539599 TYW1BQ6NUM6 668 aa16.02■□□□□ 0.15
UBE3B-210ENST00000539599 APTXQ7Z2E3 356 aaKnown RBP16.02■□□□□ 0.15
UBE3B-210ENST00000539599 MLKLQ8NB16 471 aa16.02■□□□□ 0.15
UBE3B-210ENST00000539599 ENOX1Q8TC92 643 aaKnown RBP16.02■□□□□ 0.15
UBE3B-210ENST00000539599 TNFRSF25Q93038 417 aa16.02■□□□□ 0.15
UBE3B-210ENST00000539599 MCM9Q9NXL9 1143 aa16.02■□□□□ 0.15
UBE3B-210ENST00000539599 USP17L3A6NCW0 530 aa16.01■□□□□ 0.15
UBE3B-210ENST00000539599 USP17L4A6NCW7 530 aa16.01■□□□□ 0.15
UBE3B-210ENST00000539599 TSPY2A6NKD2 308 aa16.01■□□□□ 0.15
UBE3B-210ENST00000539599 NLRP5P59047 1200 aa16.01■□□□□ 0.15
UBE3B-210ENST00000539599 RBL2Q08999 1139 aa16.01■□□□□ 0.15
UBE3B-210ENST00000539599 USP17L1Q7RTZ2 530 aa16.01■□□□□ 0.15
UBE3B-210ENST00000539599 SYNRGQ9UMZ2 1314 aa16.01■□□□□ 0.15
UBE3B-210ENST00000539599 RNF225M0QZC1 329 aaPredicted RBP16.01■□□□□ 0.15
UBE3B-210ENST00000539599 CLCN6P51797 869 aa16.01■□□□□ 0.15
UBE3B-210ENST00000539599 HOOK1Q9UJC3 728 aaKnown RBP16.01■□□□□ 0.15
UBE3B-210ENST00000539599 ZNF652Q9Y2D9 606 aa16.01■□□□□ 0.15
UBE3B-210ENST00000539599 NR1I3Q14994 352 aa16■□□□□ 0.15
UBE3B-210ENST00000539599 RAD9BQ6WBX8 426 aa16■□□□□ 0.15
UBE3B-210ENST00000539599 CEP131Q9UPN4 1083 aa16■□□□□ 0.15
UBE3B-210ENST00000539599 GOLGA8HP0CJ92 632 aa16■□□□□ 0.15
UBE3B-210ENST00000539599 RPS8P62241 208 aaKnown RBP16■□□□□ 0.15
UBE3B-210ENST00000539599 ZNF579Q8NAF0 562 aaKnown RBP16■□□□□ 0.15
UBE3B-210ENST00000539599 SPATA20Q8TB22 786 aa16■□□□□ 0.15
UBE3B-210ENST00000539599 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16■□□□□ 0.15
UBE3B-210ENST00000539599 GDAQ9Y2T3 454 aa16■□□□□ 0.15
UBE3B-210ENST00000539599 PPP1R3GB7ZBB8 358 aa15.99■□□□□ 0.15
UBE3B-210ENST00000539599 SLFN14P0C7P3 912 aa15.99■□□□□ 0.15
UBE3B-210ENST00000539599 HIBADHP31937 336 aaKnown RBP15.99■□□□□ 0.15
UBE3B-210ENST00000539599 SF3B3Q15393 1217 aaKnown RBP15.99■□□□□ 0.15
UBE3B-210ENST00000539599 SLC35G1Q2M3R5 365 aa15.99■□□□□ 0.15
UBE3B-210ENST00000539599 RCSD1Q6JBY9 416 aa15.99■□□□□ 0.15
UBE3B-210ENST00000539599 FBXO33Q7Z6M2 555 aa15.99■□□□□ 0.15
UBE3B-210ENST00000539599 CTCFLQ8NI51 663 aaPredicted RBP15.99■□□□□ 0.15
UBE3B-210ENST00000539599 FEZ1Q99689 392 aa15.99■□□□□ 0.15
UBE3B-210ENST00000539599 BRIP1Q9BX63 1249 aa15.99■□□□□ 0.15
UBE3B-210ENST00000539599 SAP30BPQ9UHR5 308 aaKnown RBP15.99■□□□□ 0.15
UBE3B-210ENST00000539599 ARHGAP6O43182 974 aa15.99■□□□□ 0.15
UBE3B-210ENST00000539599 XBP1P17861 261 aa15.99■□□□□ 0.15
UBE3B-210ENST00000539599 NBPF5PQ86XG9 351 aaPredicted RBP15.99■□□□□ 0.15
UBE3B-210ENST00000539599 VPS16Q9H269 839 aa15.99■□□□□ 0.15
UBE3B-210ENST00000539599 IL17RBQ9NRM6 502 aa15.99■□□□□ 0.15
UBE3B-210ENST00000539599 KIF2AO00139 706 aaPredicted RBP15.98■□□□□ 0.15
UBE3B-210ENST00000539599 GNPATO15228 680 aa15.98■□□□□ 0.15
UBE3B-210ENST00000539599 IGSF22Q8N9C0 903 aa15.98■□□□□ 0.15
UBE3B-210ENST00000539599 TRIM49BA6NDI0 452 aa15.98■□□□□ 0.15
UBE3B-210ENST00000539599 CASP14P31944 242 aa15.98■□□□□ 0.15
UBE3B-210ENST00000539599 FXR1P51114 621 aaKnown RBP eCLIP15.98■□□□□ 0.15
UBE3B-210ENST00000539599 TFAP4Q01664 338 aa15.98■□□□□ 0.15
UBE3B-210ENST00000539599 SH3RF1Q7Z6J0 888 aa15.98■□□□□ 0.15
UBE3B-210ENST00000539599 SPATA31A5Q5VU36 1347 aa15.98■□□□□ 0.15
UBE3B-210ENST00000539599 SPATA31A7Q8IWB4 1347 aa15.98■□□□□ 0.15
UBE3B-210ENST00000539599 SRCAPQ6ZRS2 3230 aa15.98■□□□□ 0.15
UBE3B-210ENST00000539599 WNK3Q9BYP7 1800 aa15.98■□□□□ 0.15
UBE3B-210ENST00000539599 A0A1B0GTH6 734 aa15.98■□□□□ 0.15
UBE3B-210ENST00000539599 SCG2P13521 617 aa15.98■□□□□ 0.15
UBE3B-210ENST00000539599 RRAGBQ5VZM2 374 aa15.98■□□□□ 0.15
UBE3B-210ENST00000539599 RGS22Q8NE09 1264 aa15.98■□□□□ 0.15
UBE3B-210ENST00000539599 MNS1Q8NEH6 495 aa15.98■□□□□ 0.15
UBE3B-210ENST00000539599 SH3RF3Q8TEJ3 882 aaPredicted RBP15.98■□□□□ 0.15
UBE3B-210ENST00000539599 TAB2Q9NYJ8 693 aa15.98■□□□□ 0.15
UBE3B-210ENST00000539599 MORC2Q9Y6X9 1032 aaPredicted RBP15.98■□□□□ 0.15
UBE3B-210ENST00000539599 CASZ1Q86V15 1759 aa15.97■□□□□ 0.15
UBE3B-210ENST00000539599 NFIXQ14938 502 aa15.97■□□□□ 0.15
UBE3B-210ENST00000539599 ACRBPQ8NEB7 543 aa15.97■□□□□ 0.15
UBE3B-210ENST00000539599 A0A1B0GUL6 1792 aa15.97■□□□□ 0.15
UBE3B-210ENST00000539599 PHLPP2Q6ZVD8 1323 aa15.97■□□□□ 0.15
UBE3B-210ENST00000539599 H2AFXP16104 143 aaPredicted RBP15.97■□□□□ 0.15
UBE3B-210ENST00000539599 KCNJ6P48051 423 aa15.97■□□□□ 0.15
UBE3B-210ENST00000539599 ATP2C1P98194 919 aaPredicted RBP15.97■□□□□ 0.15
UBE3B-210ENST00000539599 TEX35Q5T0J7 233 aa15.97■□□□□ 0.15
UBE3B-210ENST00000539599 TFR2Q9UP52 801 aa15.97■□□□□ 0.15
UBE3B-210ENST00000539599 E2F4Q16254 413 aa15.96■□□□□ 0.15
UBE3B-210ENST00000539599 DZIP1Q86YF9 867 aaKnown RBP15.96■□□□□ 0.15
UBE3B-210ENST00000539599 LRRC15Q8TF66 581 aa15.96■□□□□ 0.15
UBE3B-210ENST00000539599 UBXN4Q92575 508 aa15.96■□□□□ 0.15
UBE3B-210ENST00000539599 CRNKL1Q9BZJ0 848 aaKnown RBP15.96■□□□□ 0.15
UBE3B-210ENST00000539599 TMEM60Q9H2L4 133 aa15.96■□□□□ 0.15
UBE3B-210ENST00000539599 SCN7AQ01118 1682 aa15.96■□□□□ 0.15
UBE3B-210ENST00000539599 TADA3O75528 432 aa15.96■□□□□ 0.15
UBE3B-210ENST00000539599 CASQ1P31415 396 aa15.96■□□□□ 0.15
UBE3B-210ENST00000539599 SPATA1Q5VX52 437 aa15.96■□□□□ 0.15
UBE3B-210ENST00000539599 GPIHBP1Q8IV16 184 aa15.96■□□□□ 0.15
UBE3B-210ENST00000539599 NLRP3Q96P20 1036 aa15.96■□□□□ 0.15
UBE3B-210ENST00000539599 SETDB2Q96T68 719 aa15.96■□□□□ 0.15
UBE3B-210ENST00000539599 RBM28Q9NW13 759 aaKnown RBP15.96■□□□□ 0.15
UBE3B-210ENST00000539599 ADD3Q9UEY8 706 aaKnown RBP15.96■□□□□ 0.15
UBE3B-210ENST00000539599 DACH1Q9UI36 760 aa15.96■□□□□ 0.15
UBE3B-210ENST00000539599 AKR1B15C9JRZ8 316 aaPredicted RBP15.95■□□□□ 0.14
UBE3B-210ENST00000539599 GYPCP04921 128 aa15.95■□□□□ 0.14
UBE3B-210ENST00000539599 MAPKAPK5Q8IW41 473 aa15.95■□□□□ 0.14
UBE3B-210ENST00000539599 CCDC12Q8WUD4 166 aaPredicted RBP15.95■□□□□ 0.14
UBE3B-210ENST00000539599 KIFC2Q96AC6 838 aa15.95■□□□□ 0.14
UBE3B-210ENST00000539599 BRMS1Q9HCU9 246 aa15.95■□□□□ 0.14
UBE3B-210ENST00000539599 ZSCAN12O43309 604 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms