RNA–Protein interactions for RNA: ENST00000539589.5

PACSIN3-211, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PACSIN3, Length 2,009 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-211ENST00000539589 ZNF444Q8N0Y2 327 aaPredicted RBP23.35■■□□□ 1.33
PACSIN3-211ENST00000539589 CCDC82Q8N4S0 544 aa23.35■■□□□ 1.33
PACSIN3-211ENST00000539589 IDI2Q9BXS1 227 aa23.35■■□□□ 1.33
PACSIN3-211ENST00000539589 TDRD3Q9H7E2 651 aaKnown RBP23.35■■□□□ 1.33
PACSIN3-211ENST00000539589 CBX8Q9HC52 389 aa23.35■■□□□ 1.33
PACSIN3-211ENST00000539589 SPON1Q9HCB6 807 aa23.35■■□□□ 1.33
PACSIN3-211ENST00000539589 A0A1B0GVL5 298 aa23.35■■□□□ 1.33
PACSIN3-211ENST00000539589 SLURP2P0DP57 97 aa23.35■■□□□ 1.33
PACSIN3-211ENST00000539589 TROAPQ12815 778 aa23.35■■□□□ 1.33
PACSIN3-211ENST00000539589 RNF26Q9BY78 433 aaPredicted RBP23.35■■□□□ 1.33
PACSIN3-211ENST00000539589 RBM28Q9NW13 759 aaKnown RBP23.35■■□□□ 1.33
PACSIN3-211ENST00000539589 PPP6R2O75170 966 aa23.34■■□□□ 1.33
PACSIN3-211ENST00000539589 NDUFA8P51970 172 aa23.34■■□□□ 1.33
PACSIN3-211ENST00000539589 AKAP17AQ02040 695 aaKnown RBP23.34■■□□□ 1.33
PACSIN3-211ENST00000539589 LUZP1Q86V48 1076 aa23.34■■□□□ 1.33
PACSIN3-211ENST00000539589 CMA1P23946 247 aa23.33■■□□□ 1.33
PACSIN3-211ENST00000539589 NT5C2P49902 561 aa23.33■■□□□ 1.33
PACSIN3-211ENST00000539589 ZNF165P49910 485 aa23.33■■□□□ 1.33
PACSIN3-211ENST00000539589 TCP10Q12799 353 aa23.33■■□□□ 1.33
PACSIN3-211ENST00000539589 AXDND1Q5T1B0 1012 aaPredicted RBP23.33■■□□□ 1.33
PACSIN3-211ENST00000539589 NOSTRINQ8IVI9 506 aa23.33■■□□□ 1.33
PACSIN3-211ENST00000539589 CMTR1Q8N1G2 835 aaKnown RBP23.33■■□□□ 1.33
PACSIN3-211ENST00000539589 SDF4Q9BRK5 362 aa23.33■■□□□ 1.33
PACSIN3-211ENST00000539589 TCP11L1Q9NUJ3 509 aa23.33■■□□□ 1.33
PACSIN3-211ENST00000539589 DDAH1O94760 285 aa23.33■■□□□ 1.32
PACSIN3-211ENST00000539589 TSPY3P0CV98 308 aa23.33■■□□□ 1.32
PACSIN3-211ENST00000539589 TSPY8P0CW00 308 aa23.33■■□□□ 1.32
PACSIN3-211ENST00000539589 STX1AQ16623 288 aa23.33■■□□□ 1.32
PACSIN3-211ENST00000539589 SH3BP5LQ7L8J4 393 aa23.33■■□□□ 1.32
PACSIN3-211ENST00000539589 DNAJC25Q9H1X3 360 aa23.33■■□□□ 1.32
PACSIN3-211ENST00000539589 FOXP1Q9H334 677 aaPredicted RBP23.33■■□□□ 1.32
PACSIN3-211ENST00000539589 LTBP3Q9NS15 1303 aa23.33■■□□□ 1.32
PACSIN3-211ENST00000539589 BAZ2BQ9UIF8 2168 aaKnown RBP23.32■■□□□ 1.32
PACSIN3-211ENST00000539589 DIS3L2Q8IYB7 885 aaKnown RBP23.32■■□□□ 1.32
PACSIN3-211ENST00000539589 ANKS1AQ92625 1134 aa23.32■■□□□ 1.32
PACSIN3-211ENST00000539589 MAP3K14Q99558 947 aa23.32■■□□□ 1.32
PACSIN3-211ENST00000539589 EIF2AK3Q9NZJ5 1116 aaKnown RBP23.32■■□□□ 1.32
PACSIN3-211ENST00000539589 DDTLA6NHG4 134 aaPredicted RBP23.32■■□□□ 1.32
PACSIN3-211ENST00000539589 PTPAQ15257 358 aa23.32■■□□□ 1.32
PACSIN3-211ENST00000539589 JDP2Q8WYK2 163 aa23.32■■□□□ 1.32
PACSIN3-211ENST00000539589 ZNF287Q9HBT7 754 aa23.32■■□□□ 1.32
PACSIN3-211ENST00000539589 SPDYE2BA6NHP3 402 aa23.31■■□□□ 1.32
PACSIN3-211ENST00000539589 BTBD18B2RXH4 712 aa23.31■■□□□ 1.32
PACSIN3-211ENST00000539589 SPDYE6P0CI01 402 aa23.31■■□□□ 1.32
PACSIN3-211ENST00000539589 XBP1P17861 261 aa23.31■■□□□ 1.32
PACSIN3-211ENST00000539589 MARCKSP29966 332 aaPredicted RBP23.31■■□□□ 1.32
PACSIN3-211ENST00000539589 CIAPIN1Q6FI81 312 aa23.31■■□□□ 1.32
PACSIN3-211ENST00000539589 ILDR2Q71H61 639 aa23.31■■□□□ 1.32
PACSIN3-211ENST00000539589 DGKHQ86XP1 1220 aa23.31■■□□□ 1.32
PACSIN3-211ENST00000539589 AGBL3Q8NEM8 1001 aa23.31■■□□□ 1.32
PACSIN3-211ENST00000539589 NEDD1Q8NHV4 660 aa23.31■■□□□ 1.32
PACSIN3-211ENST00000539589 EIF4ENIF1Q9NRA8 985 aaKnown RBP23.31■■□□□ 1.32
PACSIN3-211ENST00000539589 KCNJ14Q9UNX9 436 aa23.31■■□□□ 1.32
PACSIN3-211ENST00000539589 NPM3O75607 178 aaKnown RBP23.3■■□□□ 1.32
PACSIN3-211ENST00000539589 SERPINB13Q9UIV8 391 aa23.3■■□□□ 1.32
PACSIN3-211ENST00000539589 SHTN1A0MZ66 631 aa23.3■■□□□ 1.32
PACSIN3-211ENST00000539589 AP5Z1O43299 807 aa23.3■■□□□ 1.32
PACSIN3-211ENST00000539589 PRPF3O43395 683 aaKnown RBP23.3■■□□□ 1.32
PACSIN3-211ENST00000539589 SHMT1P34896 483 aa23.3■■□□□ 1.32
PACSIN3-211ENST00000539589 DNAJC18Q9H819 358 aa23.3■■□□□ 1.32
PACSIN3-211ENST00000539589 ANO10Q9NW15 660 aa23.3■■□□□ 1.32
PACSIN3-211ENST00000539589 GREB1LQ9C091 1923 aaPredicted RBP23.29■■□□□ 1.32
PACSIN3-211ENST00000539589 ZNF500O60304 480 aaPredicted RBP23.29■■□□□ 1.32
PACSIN3-211ENST00000539589 HDAC9Q9UKV0 1011 aa23.29■■□□□ 1.32
PACSIN3-211ENST00000539589 ZNF202O95125 648 aa23.28■■□□□ 1.32
PACSIN3-211ENST00000539589 FUT2Q10981 343 aa23.28■■□□□ 1.32
PACSIN3-211ENST00000539589 RILPL1Q5EBL4 403 aa23.28■■□□□ 1.32
PACSIN3-211ENST00000539589 FHDC1Q9C0D6 1143 aaPredicted RBP23.28■■□□□ 1.32
PACSIN3-211ENST00000539589 PLEKHA8P1O95397 391 aa23.28■■□□□ 1.32
PACSIN3-211ENST00000539589 AKR1B1P15121 316 aa23.28■■□□□ 1.32
PACSIN3-211ENST00000539589 PFKFB1P16118 471 aa23.28■■□□□ 1.32
PACSIN3-211ENST00000539589 OGFOD1Q8N543 542 aa23.28■■□□□ 1.32
PACSIN3-211ENST00000539589 CTCFLQ8NI51 663 aaPredicted RBP23.28■■□□□ 1.32
PACSIN3-211ENST00000539589 HLA-DOAP06340 250 aa23.27■■□□□ 1.32
PACSIN3-211ENST00000539589 DLGAP5Q15398 846 aa23.27■■□□□ 1.32
PACSIN3-211ENST00000539589 TMEM47Q9BQJ4 181 aa23.27■■□□□ 1.32
PACSIN3-211ENST00000539589 EHD4Q9H223 541 aa23.27■■□□□ 1.32
PACSIN3-211ENST00000539589 CLRN2A0PK11 232 aa23.26■■□□□ 1.31
PACSIN3-211ENST00000539589 CUTAO60888 179 aa23.26■■□□□ 1.31
PACSIN3-211ENST00000539589 NOVP48745 357 aa23.26■■□□□ 1.31
PACSIN3-211ENST00000539589 CCDC178Q5BJE1 867 aa23.26■■□□□ 1.31
PACSIN3-211ENST00000539589 TMTC3Q6ZXV5 915 aa23.26■■□□□ 1.31
PACSIN3-211ENST00000539589 PNMA1Q8ND90 353 aa23.26■■□□□ 1.31
PACSIN3-211ENST00000539589 CEP95Q96GE4 821 aa23.26■■□□□ 1.31
PACSIN3-211ENST00000539589 DHX36Q9H2U1 1008 aaKnown RBP23.26■■□□□ 1.31
PACSIN3-211ENST00000539589 KAT14Q9H8E8 782 aa23.26■■□□□ 1.31
PACSIN3-211ENST00000539589 SWAP70Q9UH65 585 aa23.26■■□□□ 1.31
PACSIN3-211ENST00000539589 V9GY48 417 aaPredicted RBP23.26■■□□□ 1.31
PACSIN3-211ENST00000539589 SBF1O95248 1867 aa23.26■■□□□ 1.31
PACSIN3-211ENST00000539589 PLIN4Q96Q06 1357 aa23.26■■□□□ 1.31
PACSIN3-211ENST00000539589 FAM196BA6NMK8 535 aa23.26■■□□□ 1.31
PACSIN3-211ENST00000539589 PKN1Q16512 942 aa23.26■■□□□ 1.31
PACSIN3-211ENST00000539589 MTMR14Q8NCE2 650 aa23.26■■□□□ 1.31
PACSIN3-211ENST00000539589 ZBED3Q96IU2 234 aaPredicted RBP23.26■■□□□ 1.31
PACSIN3-211ENST00000539589 TIGD1Q96MW7 591 aa23.26■■□□□ 1.31
PACSIN3-211ENST00000539589 KIAA1468Q9P260 1216 aa23.26■■□□□ 1.31
PACSIN3-211ENST00000539589 ZNF70Q9UC06 446 aaPredicted RBP23.26■■□□□ 1.31
PACSIN3-211ENST00000539589 STX8Q9UNK0 236 aa23.26■■□□□ 1.31
PACSIN3-211ENST00000539589 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP23.26■■□□□ 1.31
PACSIN3-211ENST00000539589 DICER1Q9UPY3 1922 aaKnown RBP23.26■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms