RNA–Protein interactions for RNA: ENST00000539584.5

UBE3B-209, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 2,006 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-209ENST00000539584 GYPCP04921 128 aa15□□□□□ -0.01
UBE3B-209ENST00000539584 CTAGE8P0CG41 777 aa15□□□□□ -0.01
UBE3B-209ENST00000539584 CD44P16070 742 aaKnown RBP15□□□□□ -0.01
UBE3B-209ENST00000539584 CASP14P31944 242 aa15□□□□□ -0.01
UBE3B-209ENST00000539584 IGHMBP2P38935 993 aaKnown RBP15□□□□□ -0.01
UBE3B-209ENST00000539584 MTF1Q14872 753 aa15□□□□□ -0.01
UBE3B-209ENST00000539584 PTPN21Q16825 1174 aa15□□□□□ -0.01
UBE3B-209ENST00000539584 CCDC152Q4G0S7 254 aa15□□□□□ -0.01
UBE3B-209ENST00000539584 PARP10Q53GL7 1025 aa15□□□□□ -0.01
UBE3B-209ENST00000539584 ZNF569Q5MCW4 686 aa15□□□□□ -0.01
UBE3B-209ENST00000539584 ARL6IP4Q66PJ3 421 aaKnown RBP15□□□□□ -0.01
UBE3B-209ENST00000539584 CTAGE6Q86UF2 777 aa15□□□□□ -0.01
UBE3B-209ENST00000539584 CTAGE4Q8IX94 777 aa15□□□□□ -0.01
UBE3B-209ENST00000539584 EPSTI1Q96J88 318 aa15□□□□□ -0.01
UBE3B-209ENST00000539584 ZKSCAN3Q9BRR0 538 aa15□□□□□ -0.01
UBE3B-209ENST00000539584 BRIP1Q9BX63 1249 aa15□□□□□ -0.01
UBE3B-209ENST00000539584 ABHD10Q9NUJ1 306 aa15□□□□□ -0.01
UBE3B-209ENST00000539584 TAOK2Q9UL54 1235 aa15□□□□□ -0.01
UBE3B-209ENST00000539584 BCL9O00512 1426 aa15□□□□□ -0.01
UBE3B-209ENST00000539584 PLCH1Q4KWH8 1693 aa14.99□□□□□ -0.01
UBE3B-209ENST00000539584 MYL1P05976 194 aa14.99□□□□□ -0.01
UBE3B-209ENST00000539584 AFMP43652 599 aa14.99□□□□□ -0.01
UBE3B-209ENST00000539584 TTC38Q5R3I4 469 aa14.99□□□□□ -0.01
UBE3B-209ENST00000539584 IFIT1BQ5T764 474 aaKnown RBP14.99□□□□□ -0.01
UBE3B-209ENST00000539584 ZNF662Q6ZS27 426 aa14.99□□□□□ -0.01
UBE3B-209ENST00000539584 GOLGA5Q8TBA6 731 aa14.99□□□□□ -0.01
UBE3B-209ENST00000539584 TNFRSF25Q93038 417 aa14.99□□□□□ -0.01
UBE3B-209ENST00000539584 CDC5LQ99459 802 aaKnown RBP14.99□□□□□ -0.01
UBE3B-209ENST00000539584 ANKZF1Q9H8Y5 726 aa14.99□□□□□ -0.01
UBE3B-209ENST00000539584 GNL3LQ9NVN8 582 aaKnown RBP14.99□□□□□ -0.01
UBE3B-209ENST00000539584 L1RE1Q9UN81 338 aa14.99□□□□□ -0.01
UBE3B-209ENST00000539584 A0A087X0B3 334 aa14.99□□□□□ -0.01
UBE3B-209ENST00000539584 H7C1D1 291 aa14.99□□□□□ -0.01
UBE3B-209ENST00000539584 N4BP3O15049 544 aa14.99□□□□□ -0.01
UBE3B-209ENST00000539584 ATP2B1P20020 1258 aa14.99□□□□□ -0.01
UBE3B-209ENST00000539584 PAK1Q13153 545 aa14.99□□□□□ -0.01
UBE3B-209ENST00000539584 E2F4Q16254 413 aa14.99□□□□□ -0.01
UBE3B-209ENST00000539584 ZNF658Q5TYW1 1059 aaPredicted RBP14.99□□□□□ -0.01
UBE3B-209ENST00000539584 KLHL10Q6JEL2 608 aa14.99□□□□□ -0.01
UBE3B-209ENST00000539584 CCDC82Q8N4S0 544 aa14.99□□□□□ -0.01
UBE3B-209ENST00000539584 RPGRIP1Q96KN7 1286 aa14.99□□□□□ -0.01
UBE3B-209ENST00000539584 SEC31BQ9NQW1 1179 aa14.99□□□□□ -0.01
UBE3B-209ENST00000539584 VPS54Q9P1Q0 977 aa14.99□□□□□ -0.01
UBE3B-209ENST00000539584 ADAM21Q9UKJ8 722 aa14.99□□□□□ -0.01
UBE3B-209ENST00000539584 STRCP1A6NGW2 1772 aa14.98□□□□□ -0.01
UBE3B-209ENST00000539584 MAGEB6P1A0A0J9YX57 407 aa14.98□□□□□ -0.01
UBE3B-209ENST00000539584 WDR93Q6P2C0 686 aa14.98□□□□□ -0.01
UBE3B-209ENST00000539584 EPC1Q9H2F5 836 aa14.98□□□□□ -0.01
UBE3B-209ENST00000539584 ZBTB1Q9Y2K1 713 aa14.98□□□□□ -0.01
UBE3B-209ENST00000539584 A0A1W2PQC6 194 aa14.97□□□□□ -0.01
UBE3B-209ENST00000539584 CYP7A1P22680 504 aa14.97□□□□□ -0.01
UBE3B-209ENST00000539584 LONP1P36776 959 aaKnown RBP14.97□□□□□ -0.01
UBE3B-209ENST00000539584 COPB1P53618 953 aaKnown RBP14.97□□□□□ -0.01
UBE3B-209ENST00000539584 TROAPQ12815 778 aa14.97□□□□□ -0.01
UBE3B-209ENST00000539584 KRT31Q15323 416 aa14.97□□□□□ -0.01
UBE3B-209ENST00000539584 ENAHQ8N8S7 591 aaPredicted RBP14.97□□□□□ -0.01
UBE3B-209ENST00000539584 EHBP1Q8NDI1 1231 aa14.97□□□□□ -0.01
UBE3B-209ENST00000539584 HELBQ8NG08 1087 aaPredicted RBP14.97□□□□□ -0.01
UBE3B-209ENST00000539584 HAUS4Q9H6D7 363 aa14.97□□□□□ -0.01
UBE3B-209ENST00000539584 NUP98P52948 1817 aa14.97□□□□□ -0.01
UBE3B-209ENST00000539584 IVLP07476 585 aa14.97□□□□□ -0.01
UBE3B-209ENST00000539584 FXR1P51114 621 aaKnown RBP eCLIP14.97□□□□□ -0.01
UBE3B-209ENST00000539584 STX17P56962 302 aa14.97□□□□□ -0.01
UBE3B-209ENST00000539584 TCP11X2Q5H9J9 407 aa14.97□□□□□ -0.01
UBE3B-209ENST00000539584 TMTC3Q6ZXV5 915 aa14.97□□□□□ -0.01
UBE3B-209ENST00000539584 CPLX3Q8WVH0 158 aa14.97□□□□□ -0.01
UBE3B-209ENST00000539584 IRX2Q9BZI1 471 aaPredicted RBP14.97□□□□□ -0.01
UBE3B-209ENST00000539584 VIPAS39Q9H9C1 493 aa14.97□□□□□ -0.01
UBE3B-209ENST00000539584 MED4Q9NPJ6 270 aa14.97□□□□□ -0.01
UBE3B-209ENST00000539584 V9GY48 417 aaPredicted RBP14.97□□□□□ -0.01
UBE3B-209ENST00000539584 ZNF804BA4D1E1 1349 aa14.97□□□□□ -0.01
UBE3B-209ENST00000539584 RPS6KA5O75582 802 aa14.96□□□□□ -0.01
UBE3B-209ENST00000539584 CALML3P27482 149 aa14.96□□□□□ -0.01
UBE3B-209ENST00000539584 PTGDRQ13258 359 aa14.96□□□□□ -0.01
UBE3B-209ENST00000539584 ZSCAN26Q16670 478 aa14.96□□□□□ -0.01
UBE3B-209ENST00000539584 RRAGBQ5VZM2 374 aa14.96□□□□□ -0.01
UBE3B-209ENST00000539584 PDXDC2PQ6P474 469 aa14.96□□□□□ -0.01
UBE3B-209ENST00000539584 CMTR1Q8N1G2 835 aaKnown RBP14.96□□□□□ -0.01
UBE3B-209ENST00000539584 PIAS4Q8N2W9 510 aaPredicted RBP14.96□□□□□ -0.01
UBE3B-209ENST00000539584 SLC35F6Q8N357 371 aa14.96□□□□□ -0.01
UBE3B-209ENST00000539584 CCDC148Q8NFR7 591 aa14.96□□□□□ -0.01
UBE3B-209ENST00000539584 NUP88Q99567 741 aaPredicted RBP14.96□□□□□ -0.01
UBE3B-209ENST00000539584 MINDY4BA8MYZ0 360 aa14.95□□□□□ -0.02
UBE3B-209ENST00000539584 EEF1GP26641 437 aaKnown RBP14.95□□□□□ -0.02
UBE3B-209ENST00000539584 BCAMP50895 628 aa14.95□□□□□ -0.02
UBE3B-209ENST00000539584 IRX5P78411 483 aaPredicted RBP14.95□□□□□ -0.02
UBE3B-209ENST00000539584 ST5P78524 1137 aa14.95□□□□□ -0.02
UBE3B-209ENST00000539584 TSR1Q2NL82 804 aaKnown RBP14.95□□□□□ -0.02
UBE3B-209ENST00000539584 HSP90B2PQ58FF3 399 aa14.95□□□□□ -0.02
UBE3B-209ENST00000539584 CTCFLQ8NI51 663 aaPredicted RBP14.95□□□□□ -0.02
UBE3B-209ENST00000539584 FAM71BQ8TC56 605 aa14.95□□□□□ -0.02
UBE3B-209ENST00000539584 NOC3LQ8WTT2 800 aaKnown RBP14.95□□□□□ -0.02
UBE3B-209ENST00000539584 PUF60Q9UHX1 559 aaKnown RBP14.95□□□□□ -0.02
UBE3B-209ENST00000539584 MYO6Q9UM54 1294 aa14.95□□□□□ -0.02
UBE3B-209ENST00000539584 CTNND2Q9UQB3 1225 aa14.95□□□□□ -0.02
UBE3B-209ENST00000539584 XDHP47989 1333 aa14.95□□□□□ -0.02
UBE3B-209ENST00000539584 KCNJ18B7U540 433 aa14.95□□□□□ -0.02
UBE3B-209ENST00000539584 PSMD14O00487 310 aa14.95□□□□□ -0.02
UBE3B-209ENST00000539584 ORC4O43929 436 aa14.95□□□□□ -0.02
UBE3B-209ENST00000539584 ACTN2P35609 894 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms