RNA–Protein interactions for RNA: ENST00000539382.5

CTCFL-212, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best) BASIC

Gene CTCFL, Length 2,262 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-212ENST00000539382 BTBD18B2RXH4 712 aa12.87□□□□□ -0.35
CTCFL-212ENST00000539382 CYTH3O43739 400 aa12.87□□□□□ -0.35
CTCFL-212ENST00000539382 MBD3O95983 291 aa12.87□□□□□ -0.35
CTCFL-212ENST00000539382 JAG1P78504 1218 aa12.87□□□□□ -0.35
CTCFL-212ENST00000539382 GRM4Q14833 912 aa12.87□□□□□ -0.35
CTCFL-212ENST00000539382 ZSCAN23Q3MJ62 389 aa12.87□□□□□ -0.35
CTCFL-212ENST00000539382 OXER1Q8TDS5 423 aa12.87□□□□□ -0.35
CTCFL-212ENST00000539382 SCAND2PQ9GZW5 306 aaPredicted RBP12.87□□□□□ -0.35
CTCFL-212ENST00000539382 DHX36Q9H2U1 1008 aaKnown RBP12.87□□□□□ -0.35
CTCFL-212ENST00000539382 VPS54Q9P1Q0 977 aa12.87□□□□□ -0.35
CTCFL-212ENST00000539382 ZNF70Q9UC06 446 aaPredicted RBP12.87□□□□□ -0.35
CTCFL-212ENST00000539382 SWAP70Q9UH65 585 aa12.87□□□□□ -0.35
CTCFL-212ENST00000539382 SCAF8Q9UPN6 1271 aaKnown RBP12.87□□□□□ -0.35
CTCFL-212ENST00000539382 CLIC4Q9Y696 253 aa12.87□□□□□ -0.35
CTCFL-212ENST00000539382 ELP1O95163 1332 aa12.87□□□□□ -0.35
CTCFL-212ENST00000539382 ADAMTS3O15072 1205 aa12.86□□□□□ -0.35
CTCFL-212ENST00000539382 GTPBP6O43824 516 aaPredicted RBP12.86□□□□□ -0.35
CTCFL-212ENST00000539382 MMP1P03956 469 aa12.86□□□□□ -0.35
CTCFL-212ENST00000539382 U2AF2P26368 475 aaKnown RBP eCLIP12.86□□□□□ -0.35
CTCFL-212ENST00000539382 CNTNAP1P78357 1384 aa12.86□□□□□ -0.35
CTCFL-212ENST00000539382 RRP1BQ14684 758 aaKnown RBP12.86□□□□□ -0.35
CTCFL-212ENST00000539382 NBPF9Q3BBW0 867 aa12.86□□□□□ -0.35
CTCFL-212ENST00000539382 CCDC178Q5BJE1 867 aa12.86□□□□□ -0.35
CTCFL-212ENST00000539382 MYSM1Q5VVJ2 828 aa12.86□□□□□ -0.35
CTCFL-212ENST00000539382 USP17L2Q6R6M4 530 aa12.86□□□□□ -0.35
CTCFL-212ENST00000539382 ZBED3Q96IU2 234 aaPredicted RBP12.86□□□□□ -0.35
CTCFL-212ENST00000539382 ATRNL1Q5VV63 1379 aa12.86□□□□□ -0.35
CTCFL-212ENST00000539382 LTBP3Q9NS15 1303 aa12.86□□□□□ -0.35
CTCFL-212ENST00000539382 PALM3A6NDB9 673 aaPredicted RBP12.86□□□□□ -0.35
CTCFL-212ENST00000539382 WNT10BO00744 389 aa12.86□□□□□ -0.35
CTCFL-212ENST00000539382 ENTPD3O75355 529 aa12.86□□□□□ -0.35
CTCFL-212ENST00000539382 NR5A1Q13285 461 aa12.86□□□□□ -0.35
CTCFL-212ENST00000539382 METTL16Q86W50 562 aaKnown RBP12.86□□□□□ -0.35
CTCFL-212ENST00000539382 LRRC47Q8N1G4 583 aaKnown RBP12.86□□□□□ -0.35
CTCFL-212ENST00000539382 MAP3K14Q99558 947 aa12.86□□□□□ -0.35
CTCFL-212ENST00000539382 PANK2Q9BZ23 570 aa12.86□□□□□ -0.35
CTCFL-212ENST00000539382 FHDC1Q9C0D6 1143 aaPredicted RBP12.86□□□□□ -0.35
CTCFL-212ENST00000539382 SPON1Q9HCB6 807 aa12.86□□□□□ -0.35
CTCFL-212ENST00000539382 RCOR1Q9UKL0 485 aa12.86□□□□□ -0.35
CTCFL-212ENST00000539382 HDAC9Q9UKV0 1011 aa12.86□□□□□ -0.35
CTCFL-212ENST00000539382 MYH6P13533 1939 aa12.85□□□□□ -0.35
CTCFL-212ENST00000539382 TOP1P11387 765 aaKnown RBP12.85□□□□□ -0.35
CTCFL-212ENST00000539382 NPY5RQ15761 445 aa12.85□□□□□ -0.35
CTCFL-212ENST00000539382 SPDYE2Q495Y8 402 aa12.85□□□□□ -0.35
CTCFL-212ENST00000539382 RGS22Q8NE09 1264 aa12.85□□□□□ -0.35
CTCFL-212ENST00000539382 WASF1Q92558 559 aa12.85□□□□□ -0.35
CTCFL-212ENST00000539382 CFAP45Q9UL16 551 aa12.85□□□□□ -0.35
CTCFL-212ENST00000539382 MYH8P13535 1937 aa12.85□□□□□ -0.35
CTCFL-212ENST00000539382 USP17L5A8MUK1 530 aa12.85□□□□□ -0.35
CTCFL-212ENST00000539382 FZD9O00144 591 aa12.85□□□□□ -0.35
CTCFL-212ENST00000539382 MPHOSPH10O00566 681 aaKnown RBP12.85□□□□□ -0.35
CTCFL-212ENST00000539382 LIG1P18858 919 aa12.85□□□□□ -0.35
CTCFL-212ENST00000539382 KIF5BP33176 963 aa12.85□□□□□ -0.35
CTCFL-212ENST00000539382 MRE11P49959 708 aa12.85□□□□□ -0.35
CTCFL-212ENST00000539382 TRIM29Q14134 588 aa12.85□□□□□ -0.35
CTCFL-212ENST00000539382 TATDN1Q6P1N9 297 aa12.85□□□□□ -0.35
CTCFL-212ENST00000539382 BRAPQ7Z569 592 aa12.85□□□□□ -0.35
CTCFL-212ENST00000539382 DIS3L2Q8IYB7 885 aaKnown RBP12.85□□□□□ -0.35
CTCFL-212ENST00000539382 MTMR14Q8NCE2 650 aa12.85□□□□□ -0.35
CTCFL-212ENST00000539382 CSRNP1Q96S65 589 aa12.85□□□□□ -0.35
CTCFL-212ENST00000539382 CLIP2Q9UDT6 1046 aa12.85□□□□□ -0.35
CTCFL-212ENST00000539382 GREB1LQ9C091 1923 aaPredicted RBP12.84□□□□□ -0.35
CTCFL-212ENST00000539382 CSPP1Q1MSJ5 1256 aa12.84□□□□□ -0.35
CTCFL-212ENST00000539382 EARS2Q5JPH6 523 aaKnown RBP12.84□□□□□ -0.35
CTCFL-212ENST00000539382 SIAH1Q8IUQ4 282 aa12.84□□□□□ -0.35
CTCFL-212ENST00000539382 PHF20Q9BVI0 1012 aa12.84□□□□□ -0.35
CTCFL-212ENST00000539382 TMEM39BQ9GZU3 492 aa12.84□□□□□ -0.35
CTCFL-212ENST00000539382 GRPEL1Q9HAV7 217 aa12.84□□□□□ -0.35
CTCFL-212ENST00000539382 MYOZ2Q9NPC6 264 aa12.84□□□□□ -0.35
CTCFL-212ENST00000539382 RTEL1Q9NZ71 1219 aa12.84□□□□□ -0.35
CTCFL-212ENST00000539382 ZNF541Q9H0D2 1346 aa12.84□□□□□ -0.35
CTCFL-212ENST00000539382 ARFGEF1Q9Y6D6 1849 aa12.83□□□□□ -0.35
CTCFL-212ENST00000539382 KLRF2D3W0D1 207 aa12.83□□□□□ -0.35
CTCFL-212ENST00000539382 PDHBP11177 359 aa12.83□□□□□ -0.35
CTCFL-212ENST00000539382 AKAP17AQ02040 695 aaKnown RBP12.83□□□□□ -0.35
CTCFL-212ENST00000539382 CERKLQ49MI3 558 aaPredicted RBP12.83□□□□□ -0.35
CTCFL-212ENST00000539382 NOM1Q5C9Z4 860 aaKnown RBP12.83□□□□□ -0.35
CTCFL-212ENST00000539382 TYW1BQ6NUM6 668 aa12.83□□□□□ -0.35
CTCFL-212ENST00000539382 FOXP4Q8IVH2 680 aaPredicted RBP12.83□□□□□ -0.35
CTCFL-212ENST00000539382 LINC00301Q8NCQ3 95 aa12.83□□□□□ -0.35
CTCFL-212ENST00000539382 VEZTQ9HBM0 779 aa12.83□□□□□ -0.35
CTCFL-212ENST00000539382 ISY1Q9ULR0 285 aaKnown RBP12.83□□□□□ -0.35
CTCFL-212ENST00000539382 ASTN2O75129 1339 aaPredicted RBP12.83□□□□□ -0.36
CTCFL-212ENST00000539382 SYCE3A1L190 88 aa12.83□□□□□ -0.36
CTCFL-212ENST00000539382 FAM205CA6NFA0 338 aa12.83□□□□□ -0.36
CTCFL-212ENST00000539382 GDF11O95390 407 aa12.83□□□□□ -0.36
CTCFL-212ENST00000539382 TTLL1O95922 423 aa12.83□□□□□ -0.36
CTCFL-212ENST00000539382 SCG2P13521 617 aa12.83□□□□□ -0.36
CTCFL-212ENST00000539382 GMPSP49915 693 aaPredicted RBP12.83□□□□□ -0.36
CTCFL-212ENST00000539382 TOB1P50616 345 aaPredicted RBP12.83□□□□□ -0.36
CTCFL-212ENST00000539382 PFKFB3Q16875 520 aaPredicted RBP12.83□□□□□ -0.36
CTCFL-212ENST00000539382 RBM26Q5T8P6 1007 aaKnown RBP12.83□□□□□ -0.36
CTCFL-212ENST00000539382 ILDR2Q71H61 639 aa12.83□□□□□ -0.36
CTCFL-212ENST00000539382 NOSTRINQ8IVI9 506 aa12.83□□□□□ -0.36
CTCFL-212ENST00000539382 ZNF396Q96N95 335 aaPredicted RBP12.83□□□□□ -0.36
CTCFL-212ENST00000539382 PGAP2Q9UHJ9 254 aa12.83□□□□□ -0.36
CTCFL-212ENST00000539382 FRMPD2Q68DX3 1309 aaPredicted RBP12.82□□□□□ -0.36
CTCFL-212ENST00000539382 ZNF280AP59817 542 aaPredicted RBP12.82□□□□□ -0.36
CTCFL-212ENST00000539382 SEPT2Q15019 361 aa12.82□□□□□ -0.36
CTCFL-212ENST00000539382 TNIP1Q15025 636 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms