RNA–Protein interactions for RNA: ENST00000539372.5

TNFRSF1A-212, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,063 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-212ENST00000539372 CCNA1P78396 465 aa22.84■■□□□ 1.25
TNFRSF1A-212ENST00000539372 LRRFIP1Q32MZ4 808 aaKnown RBP22.84■■□□□ 1.25
TNFRSF1A-212ENST00000539372 MORN1Q5T089 497 aa22.84■■□□□ 1.25
TNFRSF1A-212ENST00000539372 LBX2Q6XYB7 198 aa22.84■■□□□ 1.25
TNFRSF1A-212ENST00000539372 SEC62Q99442 399 aaKnown RBP22.84■■□□□ 1.25
TNFRSF1A-212ENST00000539372 XRN2Q9H0D6 950 aaKnown RBP eCLIP22.84■■□□□ 1.25
TNFRSF1A-212ENST00000539372 EPB41L4AQ9HCS5 686 aaPredicted RBP22.84■■□□□ 1.25
TNFRSF1A-212ENST00000539372 TMX2Q9Y320 296 aa22.84■■□□□ 1.25
TNFRSF1A-212ENST00000539372 FARP2O94887 1054 aaPredicted RBP22.83■■□□□ 1.25
TNFRSF1A-212ENST00000539372 APPP05067 770 aa22.83■■□□□ 1.25
TNFRSF1A-212ENST00000539372 EEF2P13639 858 aaKnown RBP22.83■■□□□ 1.25
TNFRSF1A-212ENST00000539372 HDAC1Q13547 482 aaPredicted RBP22.83■■□□□ 1.25
TNFRSF1A-212ENST00000539372 SBK1Q52WX2 424 aa22.83■■□□□ 1.25
TNFRSF1A-212ENST00000539372 GIMAP6Q6P9H5 292 aa22.83■■□□□ 1.25
TNFRSF1A-212ENST00000539372 UBE2Q1Q7Z7E8 422 aa22.83■■□□□ 1.25
TNFRSF1A-212ENST00000539372 SH2D4AQ9H788 454 aa22.83■■□□□ 1.25
TNFRSF1A-212ENST00000539372 SALL3Q9BXA9 1300 aa22.82■■□□□ 1.24
TNFRSF1A-212ENST00000539372 GNAT2P19087 354 aa22.82■■□□□ 1.24
TNFRSF1A-212ENST00000539372 RGS2P41220 211 aa22.82■■□□□ 1.24
TNFRSF1A-212ENST00000539372 TDO2P48775 406 aa22.82■■□□□ 1.24
TNFRSF1A-212ENST00000539372 COG2Q14746 738 aa22.82■■□□□ 1.24
TNFRSF1A-212ENST00000539372 LPAR1Q92633 364 aa22.82■■□□□ 1.24
TNFRSF1A-212ENST00000539372 USP6NLQ92738 828 aa22.82■■□□□ 1.24
TNFRSF1A-212ENST00000539372 GCC1Q96CN9 775 aa22.82■■□□□ 1.24
TNFRSF1A-212ENST00000539372 VCPKMTQ9H867 229 aa22.82■■□□□ 1.24
TNFRSF1A-212ENST00000539372 KANSL2Q9H9L4 492 aa22.82■■□□□ 1.24
TNFRSF1A-212ENST00000539372 XRCC5P13010 732 aaKnown RBP22.81■■□□□ 1.24
TNFRSF1A-212ENST00000539372 ZKSCAN1P17029 563 aaPredicted RBP22.81■■□□□ 1.24
TNFRSF1A-212ENST00000539372 CCL14Q16627 93 aa22.81■■□□□ 1.24
TNFRSF1A-212ENST00000539372 SAMD1Q6SPF0 538 aaPredicted RBP22.81■■□□□ 1.24
TNFRSF1A-212ENST00000539372 DPF3Q92784 378 aa22.81■■□□□ 1.24
TNFRSF1A-212ENST00000539372 MKNK2Q9HBH9 465 aa22.81■■□□□ 1.24
TNFRSF1A-212ENST00000539372 HMX1Q9NP08 348 aaPredicted RBP22.81■■□□□ 1.24
TNFRSF1A-212ENST00000539372 HOXC10Q9NYD6 342 aa22.81■■□□□ 1.24
TNFRSF1A-212ENST00000539372 RPTORQ8N122 1335 aa22.81■■□□□ 1.24
TNFRSF1A-212ENST00000539372 FLOT1O75955 427 aa22.8■■□□□ 1.24
TNFRSF1A-212ENST00000539372 PRKAR2AP13861 404 aaKnown RBP22.8■■□□□ 1.24
TNFRSF1A-212ENST00000539372 RASA1P20936 1047 aa22.8■■□□□ 1.24
TNFRSF1A-212ENST00000539372 APBA2Q99767 749 aa22.8■■□□□ 1.24
TNFRSF1A-212ENST00000539372 GNL3Q9BVP2 549 aaKnown RBP eCLIP22.8■■□□□ 1.24
TNFRSF1A-212ENST00000539372 CRISPLD2Q9H0B8 497 aa22.8■■□□□ 1.24
TNFRSF1A-212ENST00000539372 ROBO3Q96MS0 1386 aa22.79■■□□□ 1.24
TNFRSF1A-212ENST00000539372 PATL2C9JE40 543 aaKnown RBP22.79■■□□□ 1.24
TNFRSF1A-212ENST00000539372 RAD21O60216 631 aa22.79■■□□□ 1.24
TNFRSF1A-212ENST00000539372 MAP2K5Q13163 448 aa22.79■■□□□ 1.24
TNFRSF1A-212ENST00000539372 ZMYM1Q5SVZ6 1142 aa22.79■■□□□ 1.24
TNFRSF1A-212ENST00000539372 IFNL3Q8IZI9 196 aa22.79■■□□□ 1.24
TNFRSF1A-212ENST00000539372 H0YGN5 161 aa22.78■■□□□ 1.24
TNFRSF1A-212ENST00000539372 WDR46O15213 610 aaKnown RBP22.78■■□□□ 1.24
TNFRSF1A-212ENST00000539372 PTPREP23469 700 aa22.78■■□□□ 1.24
TNFRSF1A-212ENST00000539372 DSG3P32926 999 aa22.78■■□□□ 1.24
TNFRSF1A-212ENST00000539372 TRMT44Q8IYL2 757 aaKnown RBP22.78■■□□□ 1.24
TNFRSF1A-212ENST00000539372 ATG4CQ96DT6 458 aa22.78■■□□□ 1.24
TNFRSF1A-212ENST00000539372 MOV10L1Q9BXT6 1211 aaKnown RBP22.78■■□□□ 1.24
TNFRSF1A-212ENST00000539372 IVNS1ABPQ9Y6Y0 642 aa22.78■■□□□ 1.24
TNFRSF1A-212ENST00000539372 SLC15A5A6NIM6 579 aa22.77■■□□□ 1.24
TNFRSF1A-212ENST00000539372 PRDM1O75626 825 aa22.77■■□□□ 1.24
TNFRSF1A-212ENST00000539372 PDE1AP54750 535 aa22.77■■□□□ 1.24
TNFRSF1A-212ENST00000539372 CACNB2Q08289 660 aaPredicted RBP22.77■■□□□ 1.24
TNFRSF1A-212ENST00000539372 PLS1Q14651 629 aa22.77■■□□□ 1.24
TNFRSF1A-212ENST00000539372 MAP3K21Q5TCX8 1036 aa22.77■■□□□ 1.24
TNFRSF1A-212ENST00000539372 CCDC129Q6ZRS4 1044 aa22.77■■□□□ 1.24
TNFRSF1A-212ENST00000539372 HTATIP2Q9BUP3 242 aa22.77■■□□□ 1.24
TNFRSF1A-212ENST00000539372 NACAP1Q9BZK3 213 aa22.77■■□□□ 1.24
TNFRSF1A-212ENST00000539372 SPATC1LQ9H0A9 340 aa22.77■■□□□ 1.24
TNFRSF1A-212ENST00000539372 GOPCQ9HD26 462 aa22.77■■□□□ 1.24
TNFRSF1A-212ENST00000539372 STAP2Q9UGK3 403 aa22.77■■□□□ 1.24
TNFRSF1A-212ENST00000539372 SLC34A2O95436 690 aa22.76■■□□□ 1.23
TNFRSF1A-212ENST00000539372 EXOC6Q8TAG9 804 aa22.76■■□□□ 1.23
TNFRSF1A-212ENST00000539372 DIS3LQ8TF46 1054 aaKnown RBP22.76■■□□□ 1.23
TNFRSF1A-212ENST00000539372 LNPKQ9C0E8 428 aa22.76■■□□□ 1.23
TNFRSF1A-212ENST00000539372 FLRT1Q9NZU1 646 aa22.76■■□□□ 1.23
TNFRSF1A-212ENST00000539372 RLFQ13129 1914 aa22.76■■□□□ 1.23
TNFRSF1A-212ENST00000539372 ERCC3P19447 782 aa22.75■■□□□ 1.23
TNFRSF1A-212ENST00000539372 CCND3P30281 292 aaPredicted RBP22.75■■□□□ 1.23
TNFRSF1A-212ENST00000539372 AAMPQ13685 434 aa22.75■■□□□ 1.23
TNFRSF1A-212ENST00000539372 GRB14Q14449 540 aa22.75■■□□□ 1.23
TNFRSF1A-212ENST00000539372 FAM83BQ5T0W9 1011 aa22.75■■□□□ 1.23
TNFRSF1A-212ENST00000539372 B4GALNT3Q6L9W6 998 aa22.75■■□□□ 1.23
TNFRSF1A-212ENST00000539372 MB21D1Q8N884 522 aa22.75■■□□□ 1.23
TNFRSF1A-212ENST00000539372 EVI5LQ96CN4 794 aa22.75■■□□□ 1.23
TNFRSF1A-212ENST00000539372 PAWRQ96IZ0 340 aaKnown RBP22.75■■□□□ 1.23
TNFRSF1A-212ENST00000539372 NAPBQ9H115 298 aa22.75■■□□□ 1.23
TNFRSF1A-212ENST00000539372 FBXO28Q9NVF7 368 aa22.75■■□□□ 1.23
TNFRSF1A-212ENST00000539372 CAPN2P17655 700 aa22.74■■□□□ 1.23
TNFRSF1A-212ENST00000539372 ZNF444Q8N0Y2 327 aaPredicted RBP22.74■■□□□ 1.23
TNFRSF1A-212ENST00000539372 RWDD1Q9H446 243 aaPredicted RBP22.74■■□□□ 1.23
TNFRSF1A-212ENST00000539372 A0A0G2JMZ2 1700 aa22.74■■□□□ 1.23
TNFRSF1A-212ENST00000539372 GREB1LQ9C091 1923 aaPredicted RBP22.73■■□□□ 1.23
TNFRSF1A-212ENST00000539372 NCAPG2Q86XI2 1143 aa22.73■■□□□ 1.23
TNFRSF1A-212ENST00000539372 NPLOC4Q8TAT6 608 aa22.73■■□□□ 1.23
TNFRSF1A-212ENST00000539372 NUP88Q99567 741 aaPredicted RBP22.73■■□□□ 1.23
TNFRSF1A-212ENST00000539372 ZNF287Q9HBT7 754 aa22.73■■□□□ 1.23
TNFRSF1A-212ENST00000539372 NYAP2Q9P242 653 aa22.73■■□□□ 1.23
TNFRSF1A-212ENST00000539372 IGHDP01880 384 aa22.72■■□□□ 1.23
TNFRSF1A-212ENST00000539372 ADORA2AP29274 412 aa22.72■■□□□ 1.23
TNFRSF1A-212ENST00000539372 PPARAQ07869 468 aa22.72■■□□□ 1.23
TNFRSF1A-212ENST00000539372 TMEM132BQ14DG7 1078 aa22.72■■□□□ 1.23
TNFRSF1A-212ENST00000539372 MFSD14CQ5VZR4 134 aa22.72■■□□□ 1.23
TNFRSF1A-212ENST00000539372 SHCBP1Q8NEM2 672 aa22.72■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms