RNA–Protein interactions for RNA: ENST00000539232.1

LMO3-220, Transcript of LIM domain only 3, humanhuman

TSL 5

Gene LMO3, Length 580 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-220ENST00000539232 FASTKD5Q7L8L6 764 aaKnown RBP8.69□□□□□ -1.02
LMO3-220ENST00000539232 TTC6Q86TZ1 520 aa8.69□□□□□ -1.02
LMO3-220ENST00000539232 ZNF589Q86UQ0 364 aaPredicted RBP8.69□□□□□ -1.02
LMO3-220ENST00000539232 SLAIN1Q8ND83 568 aa8.69□□□□□ -1.02
LMO3-220ENST00000539232 MYLIPQ8WY64 445 aa8.69□□□□□ -1.02
LMO3-220ENST00000539232 GPATCH3Q96I76 525 aa8.69□□□□□ -1.02
LMO3-220ENST00000539232 TRIM34Q9BYJ4 488 aa8.69□□□□□ -1.02
LMO3-220ENST00000539232 CRISPLD2Q9H0B8 497 aa8.69□□□□□ -1.02
LMO3-220ENST00000539232 IL25Q9H293 177 aa8.69□□□□□ -1.02
LMO3-220ENST00000539232 ZCCHC17Q9NP64 241 aaKnown RBP8.69□□□□□ -1.02
LMO3-220ENST00000539232 MYH13Q9UKX3 1938 aa8.68□□□□□ -1.02
LMO3-220ENST00000539232 MPHOSPH10O00566 681 aaKnown RBP8.68□□□□□ -1.02
LMO3-220ENST00000539232 CNMDO75829 334 aa8.68□□□□□ -1.02
LMO3-220ENST00000539232 FOSL2P15408 326 aa8.68□□□□□ -1.02
LMO3-220ENST00000539232 RASA1P20936 1047 aa8.68□□□□□ -1.02
LMO3-220ENST00000539232 NMIQ13287 307 aaPredicted RBP8.68□□□□□ -1.02
LMO3-220ENST00000539232 Q3C1V9 767 aa8.68□□□□□ -1.02
LMO3-220ENST00000539232 TMED8Q6PL24 325 aaPredicted RBP8.68□□□□□ -1.02
LMO3-220ENST00000539232 C16orf86Q6ZW13 317 aa8.68□□□□□ -1.02
LMO3-220ENST00000539232 DEFB118Q96PH6 123 aa8.68□□□□□ -1.02
LMO3-220ENST00000539232 PARK7Q99497 189 aaKnown RBP8.68□□□□□ -1.02
LMO3-220ENST00000539232 ATP8A2Q9NTI2 1148 aa8.68□□□□□ -1.02
LMO3-220ENST00000539232 RBPJLQ9UBG7 517 aa8.68□□□□□ -1.02
LMO3-220ENST00000539232 MYPNQ86TC9 1320 aa8.68□□□□□ -1.02
LMO3-220ENST00000539232 SIPA1L1O43166 1804 aa8.68□□□□□ -1.02
LMO3-220ENST00000539232 MYH2Q9UKX2 1941 aa8.68□□□□□ -1.02
LMO3-220ENST00000539232 MINDY4BA8MYZ0 360 aa8.67□□□□□ -1.02
LMO3-220ENST00000539232 USP17L10C9JJH3 530 aa8.67□□□□□ -1.02
LMO3-220ENST00000539232 ERC2O15083 957 aa8.67□□□□□ -1.02
LMO3-220ENST00000539232 FMNL1O95466 1100 aaPredicted RBP8.67□□□□□ -1.02
LMO3-220ENST00000539232 GSPT1P15170 499 aaKnown RBP8.67□□□□□ -1.02
LMO3-220ENST00000539232 VCAM1P19320 739 aa8.67□□□□□ -1.02
LMO3-220ENST00000539232 PRKCZQ05513 592 aa8.67□□□□□ -1.02
LMO3-220ENST00000539232 ECM29Q5VYK3 1845 aa8.67□□□□□ -1.02
LMO3-220ENST00000539232 ZSCAN25Q6NSZ9 544 aa8.67□□□□□ -1.02
LMO3-220ENST00000539232 CERS3Q8IU89 383 aa8.67□□□□□ -1.02
LMO3-220ENST00000539232 IFNL3Q8IZI9 196 aa8.67□□□□□ -1.02
LMO3-220ENST00000539232 SPICE1Q8N0Z3 855 aa8.67□□□□□ -1.02
LMO3-220ENST00000539232 ANKLE1Q8NAG6 615 aa8.67□□□□□ -1.02
LMO3-220ENST00000539232 PROCA1Q8NCQ7 364 aaPredicted RBP8.67□□□□□ -1.02
LMO3-220ENST00000539232 ADAMTS19Q8TE59 1207 aa8.67□□□□□ -1.02
LMO3-220ENST00000539232 DIS3LQ8TF46 1054 aaKnown RBP8.67□□□□□ -1.02
LMO3-220ENST00000539232 ATXN2LQ8WWM7 1075 aaKnown RBP8.67□□□□□ -1.02
LMO3-220ENST00000539232 SLC45A1Q9Y2W3 748 aa8.67□□□□□ -1.02
LMO3-220ENST00000539232 PATL2C9JE40 543 aaKnown RBP8.66□□□□□ -1.02
LMO3-220ENST00000539232 APPP05067 770 aa8.66□□□□□ -1.02
LMO3-220ENST00000539232 ZFYP08048 801 aaPredicted RBP8.66□□□□□ -1.02
LMO3-220ENST00000539232 EEF2P13639 858 aaKnown RBP8.66□□□□□ -1.02
LMO3-220ENST00000539232 ELNP15502 786 aa8.66□□□□□ -1.02
LMO3-220ENST00000539232 HOXA7P31268 230 aaPredicted RBP8.66□□□□□ -1.02
LMO3-220ENST00000539232 CTDSPL2Q05D32 466 aa8.66□□□□□ -1.02
LMO3-220ENST00000539232 TRIM32Q13049 653 aa8.66□□□□□ -1.02
LMO3-220ENST00000539232 SBK1Q52WX2 424 aa8.66□□□□□ -1.02
LMO3-220ENST00000539232 FAM47AQ5JRC9 791 aa8.66□□□□□ -1.02
LMO3-220ENST00000539232 RASGRP2Q7LDG7 609 aa8.66□□□□□ -1.02
LMO3-220ENST00000539232 SMCR8Q8TEV9 937 aaPredicted RBP8.66□□□□□ -1.02
LMO3-220ENST00000539232 CHMP4CQ96CF2 233 aa8.66□□□□□ -1.02
LMO3-220ENST00000539232 EVI5LQ96CN4 794 aa8.66□□□□□ -1.02
LMO3-220ENST00000539232 UHRF1Q96T88 793 aaPredicted RBP8.66□□□□□ -1.02
LMO3-220ENST00000539232 NUP88Q99567 741 aaPredicted RBP8.66□□□□□ -1.02
LMO3-220ENST00000539232 NBPF3Q9H094 633 aa8.66□□□□□ -1.02
LMO3-220ENST00000539232 KIAA1683Q9H0B3 1180 aa8.66□□□□□ -1.02
LMO3-220ENST00000539232 PORCNQ9H237 461 aa8.66□□□□□ -1.02
LMO3-220ENST00000539232 RPAP3Q9H6T3 665 aaPredicted RBP8.66□□□□□ -1.02
LMO3-220ENST00000539232 AS3MTQ9HBK9 375 aa8.66□□□□□ -1.02
LMO3-220ENST00000539232 PAK6Q9NQU5 681 aaPredicted RBP8.66□□□□□ -1.02
LMO3-220ENST00000539232 BTBD7Q9P203 1132 aa8.66□□□□□ -1.02
LMO3-220ENST00000539232 GJD2Q9UKL4 321 aa8.66□□□□□ -1.02
LMO3-220ENST00000539232 IGKV6D-41A0A0C4DH26 115 aa8.65□□□□□ -1.02
LMO3-220ENST00000539232 C19orf81C9J6K1 198 aa8.65□□□□□ -1.02
LMO3-220ENST00000539232 NMT2O60551 498 aa8.65□□□□□ -1.02
LMO3-220ENST00000539232 TDO2P48775 406 aa8.65□□□□□ -1.02
LMO3-220ENST00000539232 FLT3LGP49771 235 aa8.65□□□□□ -1.02
LMO3-220ENST00000539232 HERVK_113P62684 666 aa8.65□□□□□ -1.02
LMO3-220ENST00000539232 AAMPQ13685 434 aa8.65□□□□□ -1.02
LMO3-220ENST00000539232 USP17L2Q6R6M4 530 aa8.65□□□□□ -1.02
LMO3-220ENST00000539232 CATSPERGQ6ZRH7 1159 aa8.65□□□□□ -1.02
LMO3-220ENST00000539232 RILPL2Q969X0 211 aa8.65□□□□□ -1.02
LMO3-220ENST00000539232 C12orf42Q96LP6 360 aa8.65□□□□□ -1.02
LMO3-220ENST00000539232 ASB2Q96Q27 587 aa8.65□□□□□ -1.02
LMO3-220ENST00000539232 FEZ1Q99689 392 aa8.65□□□□□ -1.02
LMO3-220ENST00000539232 PAGR1Q9BTK6 254 aa8.65□□□□□ -1.02
LMO3-220ENST00000539232 LRFN3Q9BTN0 628 aa8.65□□□□□ -1.02
LMO3-220ENST00000539232 OSBPL3Q9H4L5 887 aa8.65□□□□□ -1.02
LMO3-220ENST00000539232 FBXO28Q9NVF7 368 aa8.65□□□□□ -1.02
LMO3-220ENST00000539232 TMOD4Q9NZQ9 345 aa8.65□□□□□ -1.02
LMO3-220ENST00000539232 MYO5AQ9Y4I1 1855 aaKnown RBP8.65□□□□□ -1.02
LMO3-220ENST00000539232 MAST2Q6P0Q8 1798 aa8.65□□□□□ -1.02
LMO3-220ENST00000539232 MGAMO43451 1857 aa8.64□□□□□ -1.03
LMO3-220ENST00000539232 SPDYE16A6NNV3 312 aaPredicted RBP8.64□□□□□ -1.03
LMO3-220ENST00000539232 TRIM6-TRIM34B2RNG4 842 aa8.64□□□□□ -1.03
LMO3-220ENST00000539232 INHAP05111 366 aa8.64□□□□□ -1.03
LMO3-220ENST00000539232 SDSP20132 328 aa8.64□□□□□ -1.03
LMO3-220ENST00000539232 IRX3P78415 501 aaPredicted RBP8.64□□□□□ -1.03
LMO3-220ENST00000539232 MDM2Q00987 491 aaPredicted RBP8.64□□□□□ -1.03
LMO3-220ENST00000539232 ATP2B2Q01814 1243 aa8.64□□□□□ -1.03
LMO3-220ENST00000539232 ICA1Q05084 483 aa8.64□□□□□ -1.03
LMO3-220ENST00000539232 GIMAP6Q6P9H5 292 aa8.64□□□□□ -1.03
LMO3-220ENST00000539232 TMEM179Q6ZVK1 233 aa8.64□□□□□ -1.03
LMO3-220ENST00000539232 USP38Q8NB14 1042 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms