RNA–Protein interactions for RNA: ENST00000539176.1

KLHL42-202, Transcript of kelch like family member 42, humanhuman

TSL 3

Gene KLHL42, Length 1,894 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL42-202ENST00000539176 PGBD1Q96JS3 809 aa29.42■■■□□ 2.3
KLHL42-202ENST00000539176 TMEM47Q9BQJ4 181 aa29.42■■■□□ 2.3
KLHL42-202ENST00000539176 FUCA2Q9BTY2 467 aa29.42■■■□□ 2.3
KLHL42-202ENST00000539176 TAOK2Q9UL54 1235 aa29.42■■■□□ 2.3
KLHL42-202ENST00000539176 CCDC196A0A1B0GTZ2 297 aa29.41■■■□□ 2.3
KLHL42-202ENST00000539176 UBE2Q2LH0YL09 131 aa29.41■■■□□ 2.3
KLHL42-202ENST00000539176 MPHOSPH10O00566 681 aaKnown RBP29.41■■■□□ 2.3
KLHL42-202ENST00000539176 DDAH1O94760 285 aa29.41■■■□□ 2.3
KLHL42-202ENST00000539176 DDNO94850 711 aaPredicted RBP29.41■■■□□ 2.3
KLHL42-202ENST00000539176 LIG1P18858 919 aa29.41■■■□□ 2.3
KLHL42-202ENST00000539176 GUCY1B3Q02153 619 aa29.41■■■□□ 2.3
KLHL42-202ENST00000539176 PPP2R5BQ15173 497 aa29.41■■■□□ 2.3
KLHL42-202ENST00000539176 GPR162Q16538 588 aa29.41■■■□□ 2.3
KLHL42-202ENST00000539176 FOXP4Q8IVH2 680 aaPredicted RBP29.41■■■□□ 2.3
KLHL42-202ENST00000539176 PNMA1Q8ND90 353 aa29.41■■■□□ 2.3
KLHL42-202ENST00000539176 PLIN4Q96Q06 1357 aa29.41■■■□□ 2.3
KLHL42-202ENST00000539176 MAP3K11Q16584 847 aa29.4■■■□□ 2.3
KLHL42-202ENST00000539176 CCDC178Q5BJE1 867 aa29.4■■■□□ 2.3
KLHL42-202ENST00000539176 FKBP1CQ5VVH2 108 aa29.4■■■□□ 2.3
KLHL42-202ENST00000539176 WASF1Q92558 559 aa29.4■■■□□ 2.3
KLHL42-202ENST00000539176 USP28Q96RU2 1077 aa29.4■■■□□ 2.3
KLHL42-202ENST00000539176 RTEL1Q9NZ71 1219 aa29.4■■■□□ 2.3
KLHL42-202ENST00000539176 GPRC5DQ9NZD1 345 aa29.4■■■□□ 2.3
KLHL42-202ENST00000539176 TRPM4Q8TD43 1214 aa29.4■■■□□ 2.3
KLHL42-202ENST00000539176 AIFM3Q96NN9 605 aa29.4■■■□□ 2.3
KLHL42-202ENST00000539176 GREB1LQ9C091 1923 aaPredicted RBP29.39■■■□□ 2.3
KLHL42-202ENST00000539176 H7C1D1 291 aa29.39■■■□□ 2.3
KLHL42-202ENST00000539176 PLEKHA8P1O95397 391 aa29.39■■■□□ 2.3
KLHL42-202ENST00000539176 CCDC192P0DO97 292 aa29.39■■■□□ 2.3
KLHL42-202ENST00000539176 EPS15P42566 896 aa29.39■■■□□ 2.3
KLHL42-202ENST00000539176 MMP14P50281 582 aa29.39■■■□□ 2.3
KLHL42-202ENST00000539176 TPRNQ4KMQ1 711 aa29.39■■■□□ 2.3
KLHL42-202ENST00000539176 RASGRP2Q7LDG7 609 aa29.39■■■□□ 2.3
KLHL42-202ENST00000539176 ALG1Q9BT22 464 aa29.39■■■□□ 2.3
KLHL42-202ENST00000539176 SLC26A6Q9BXS9 759 aa29.39■■■□□ 2.3
KLHL42-202ENST00000539176 DACT1Q9NYF0 836 aa29.39■■■□□ 2.3
KLHL42-202ENST00000539176 IGKV6D-41A0A0C4DH26 115 aa29.38■■■□□ 2.29
KLHL42-202ENST00000539176 IFNAR1P17181 557 aa29.38■■■□□ 2.29
KLHL42-202ENST00000539176 CERKLQ49MI3 558 aaPredicted RBP29.38■■■□□ 2.29
KLHL42-202ENST00000539176 METTL16Q86W50 562 aaKnown RBP29.38■■■□□ 2.29
KLHL42-202ENST00000539176 CLSTN2Q9H4D0 955 aa29.38■■■□□ 2.29
KLHL42-202ENST00000539176 GJB4Q9NTQ9 266 aa29.38■■■□□ 2.29
KLHL42-202ENST00000539176 GDF11O95390 407 aa29.38■■■□□ 2.29
KLHL42-202ENST00000539176 CALM1P0DP23 149 aa29.38■■■□□ 2.29
KLHL42-202ENST00000539176 CALM2P0DP24 149 aa29.38■■■□□ 2.29
KLHL42-202ENST00000539176 CALM3P0DP25 149 aa29.38■■■□□ 2.29
KLHL42-202ENST00000539176 RRP1BQ14684 758 aaKnown RBP29.38■■■□□ 2.29
KLHL42-202ENST00000539176 HS1BP3Q53T59 392 aa29.38■■■□□ 2.29
KLHL42-202ENST00000539176 OTUD7BQ6GQQ9 843 aa29.38■■■□□ 2.29
KLHL42-202ENST00000539176 TATDN1Q6P1N9 297 aa29.38■■■□□ 2.29
KLHL42-202ENST00000539176 RBM43Q6ZSC3 357 aaKnown RBP29.38■■■□□ 2.29
KLHL42-202ENST00000539176 FAM83AQ86UY5 434 aa29.38■■■□□ 2.29
KLHL42-202ENST00000539176 RNF214Q8ND24 703 aa29.38■■■□□ 2.29
KLHL42-202ENST00000539176 POLR3EQ9NVU0 708 aa29.38■■■□□ 2.29
KLHL42-202ENST00000539176 MTMR4Q9NYA4 1195 aa29.38■■■□□ 2.29
KLHL42-202ENST00000539176 HACL1Q9UJ83 578 aa29.38■■■□□ 2.29
KLHL42-202ENST00000539176 YEATS4O95619 227 aa29.37■■■□□ 2.29
KLHL42-202ENST00000539176 KIF23Q02241 960 aaPredicted RBP29.37■■■□□ 2.29
KLHL42-202ENST00000539176 TNMDQ9H2S6 317 aa29.37■■■□□ 2.29
KLHL42-202ENST00000539176 FMNL1O95466 1100 aaPredicted RBP29.36■■■□□ 2.29
KLHL42-202ENST00000539176 RASA3Q14644 834 aa29.36■■■□□ 2.29
KLHL42-202ENST00000539176 NBPF11Q86T75 865 aa29.36■■■□□ 2.29
KLHL42-202ENST00000539176 KCNG4Q8TDN1 519 aa29.36■■■□□ 2.29
KLHL42-202ENST00000539176 XPO5Q9HAV4 1204 aaKnown RBP eCLIP29.36■■■□□ 2.29
KLHL42-202ENST00000539176 PGAP2Q9UHJ9 254 aa29.36■■■□□ 2.29
KLHL42-202ENST00000539176 JAG1P78504 1218 aa29.36■■■□□ 2.29
KLHL42-202ENST00000539176 SSRP1Q08945 709 aaKnown RBP29.36■■■□□ 2.29
KLHL42-202ENST00000539176 TRIM29Q14134 588 aa29.36■■■□□ 2.29
KLHL42-202ENST00000539176 MYSM1Q5VVJ2 828 aa29.36■■■□□ 2.29
KLHL42-202ENST00000539176 CTCFLQ8NI51 663 aaPredicted RBP29.36■■■□□ 2.29
KLHL42-202ENST00000539176 NOVP48745 357 aa29.35■■■□□ 2.29
KLHL42-202ENST00000539176 TRIM22Q8IYM9 498 aa29.35■■■□□ 2.29
KLHL42-202ENST00000539176 LRRC47Q8N1G4 583 aaKnown RBP29.35■■■□□ 2.29
KLHL42-202ENST00000539176 CCDC17Q96LX7 622 aa29.35■■■□□ 2.29
KLHL42-202ENST00000539176 MYH6P13533 1939 aa29.34■■■□□ 2.29
KLHL42-202ENST00000539176 TOP1P11387 765 aaKnown RBP29.34■■■□□ 2.29
KLHL42-202ENST00000539176 GUCY1A2P33402 732 aa29.34■■■□□ 2.29
KLHL42-202ENST00000539176 MIGA2Q7L4E1 593 aa29.34■■■□□ 2.29
KLHL42-202ENST00000539176 CLIP2Q9UDT6 1046 aa29.34■■■□□ 2.29
KLHL42-202ENST00000539176 hCG_1642624A0A1W2PR95 340 aa29.34■■■□□ 2.29
KLHL42-202ENST00000539176 CEBPZQ03701 1054 aaKnown RBP29.34■■■□□ 2.29
KLHL42-202ENST00000539176 TMTC3Q6ZXV5 915 aa29.34■■■□□ 2.29
KLHL42-202ENST00000539176 RBM28Q9NW13 759 aaKnown RBP29.34■■■□□ 2.29
KLHL42-202ENST00000539176 MYH4Q9Y623 1939 aa29.33■■■□□ 2.29
KLHL42-202ENST00000539176 BAZ2BQ9UIF8 2168 aaKnown RBP29.33■■■□□ 2.29
KLHL42-202ENST00000539176 TNNI2P48788 182 aa29.33■■■□□ 2.29
KLHL42-202ENST00000539176 ATP2B2Q01814 1243 aa29.33■■■□□ 2.29
KLHL42-202ENST00000539176 FUT2Q10981 343 aa29.33■■■□□ 2.29
KLHL42-202ENST00000539176 STAG2Q8N3U4 1231 aa29.33■■■□□ 2.29
KLHL42-202ENST00000539176 SRBD1Q8N5C6 995 aaKnown RBP29.33■■■□□ 2.29
KLHL42-202ENST00000539176 CTAGE5O15320 804 aa29.32■■■□□ 2.28
KLHL42-202ENST00000539176 NR1I2O75469 434 aa29.32■■■□□ 2.28
KLHL42-202ENST00000539176 HIRAP54198 1017 aaPredicted RBP29.32■■■□□ 2.28
KLHL42-202ENST00000539176 GRM4Q14833 912 aa29.32■■■□□ 2.28
KLHL42-202ENST00000539176 SEPT2Q15019 361 aa29.32■■■□□ 2.28
KLHL42-202ENST00000539176 KRT40Q6A162 431 aa29.32■■■□□ 2.28
KLHL42-202ENST00000539176 CCDC73Q6ZRK6 1079 aa29.32■■■□□ 2.28
KLHL42-202ENST00000539176 HERC5Q9UII4 1024 aaKnown RBP29.32■■■□□ 2.28
KLHL42-202ENST00000539176 A0A1W2PQ27 194 aa29.31■■■□□ 2.28
KLHL42-202ENST00000539176 A0A1W2PQ64 194 aa29.31■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms