RNA–Protein interactions for RNA: ENST00000538492.5

RAB40C-204, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RAB40C, Length 2,569 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-204ENST00000538492 KAT14Q9H8E8 782 aa28.4■■■□□ 2.14
RAB40C-204ENST00000538492 IL17RBQ9NRM6 502 aa28.4■■■□□ 2.14
RAB40C-204ENST00000538492 DACH1Q9UI36 760 aa28.4■■■□□ 2.14
RAB40C-204ENST00000538492 SBF2Q86WG5 1849 aa28.4■■■□□ 2.14
RAB40C-204ENST00000538492 NCBP1Q09161 790 aaKnown RBP28.4■■■□□ 2.14
RAB40C-204ENST00000538492 PFKFB3Q16875 520 aaPredicted RBP28.4■■■□□ 2.14
RAB40C-204ENST00000538492 C12orf60Q5U649 245 aa28.4■■■□□ 2.14
RAB40C-204ENST00000538492 CNBD1Q8NA66 436 aa28.4■■■□□ 2.14
RAB40C-204ENST00000538492 SPATA20Q8TB22 786 aa28.4■■■□□ 2.14
RAB40C-204ENST00000538492 MYO1BO43795 1136 aa28.39■■■□□ 2.14
RAB40C-204ENST00000538492 TRIML1Q8N9V2 468 aa28.39■■■□□ 2.14
RAB40C-204ENST00000538492 WDR66Q8TBY9 1149 aa28.39■■■□□ 2.14
RAB40C-204ENST00000538492 ANKRD7Q92527 254 aa28.39■■■□□ 2.14
RAB40C-204ENST00000538492 MKRN1Q9UHC7 482 aaKnown RBP28.39■■■□□ 2.14
RAB40C-204ENST00000538492 NOL10Q9BSC4 688 aaKnown RBP28.39■■■□□ 2.13
RAB40C-204ENST00000538492 BMP15O95972 392 aa28.38■■■□□ 2.13
RAB40C-204ENST00000538492 SLFN14P0C7P3 912 aa28.38■■■□□ 2.13
RAB40C-204ENST00000538492 DHX8Q14562 1220 aaKnown RBP28.38■■■□□ 2.13
RAB40C-204ENST00000538492 ENOX1Q8TC92 643 aaKnown RBP28.38■■■□□ 2.13
RAB40C-204ENST00000538492 PAGE5Q96GU1 130 aa28.38■■■□□ 2.13
RAB40C-204ENST00000538492 SAMSN1Q9NSI8 373 aaKnown RBP28.38■■■□□ 2.13
RAB40C-204ENST00000538492 EP400Q96L91 3159 aa28.38■■■□□ 2.13
RAB40C-204ENST00000538492 MTMR7Q9Y216 660 aa28.38■■■□□ 2.13
RAB40C-204ENST00000538492 LEMD3Q9Y2U8 911 aa28.38■■■□□ 2.13
RAB40C-204ENST00000538492 MORC2Q9Y6X9 1032 aaPredicted RBP28.38■■■□□ 2.13
RAB40C-204ENST00000538492 ZNF18P17022 549 aa28.37■■■□□ 2.13
RAB40C-204ENST00000538492 KIF5BP33176 963 aa28.37■■■□□ 2.13
RAB40C-204ENST00000538492 MCM7P33993 719 aa28.37■■■□□ 2.13
RAB40C-204ENST00000538492 STAG2Q8N3U4 1231 aa28.37■■■□□ 2.13
RAB40C-204ENST00000538492 PDCL2Q8N4E4 241 aa28.37■■■□□ 2.13
RAB40C-204ENST00000538492 PNMA1Q8ND90 353 aa28.37■■■□□ 2.13
RAB40C-204ENST00000538492 KIF18AQ8NI77 898 aa28.37■■■□□ 2.13
RAB40C-204ENST00000538492 TGFBRAP1Q8WUH2 860 aa28.37■■■□□ 2.13
RAB40C-204ENST00000538492 GPKOWQ92917 476 aaPredicted RBP eCLIP28.37■■■□□ 2.13
RAB40C-204ENST00000538492 MKNK2Q9HBH9 465 aa28.37■■■□□ 2.13
RAB40C-204ENST00000538492 USP17L3A6NCW0 530 aa28.37■■■□□ 2.13
RAB40C-204ENST00000538492 USP17L4A6NCW7 530 aa28.37■■■□□ 2.13
RAB40C-204ENST00000538492 ATP2C1P98194 919 aaPredicted RBP28.37■■■□□ 2.13
RAB40C-204ENST00000538492 USP17L1Q7RTZ2 530 aa28.37■■■□□ 2.13
RAB40C-204ENST00000538492 UBE2Q2Q8WVN8 375 aa28.37■■■□□ 2.13
RAB40C-204ENST00000538492 STAMQ92783 540 aa28.37■■■□□ 2.13
RAB40C-204ENST00000538492 XDHP47989 1333 aa28.36■■■□□ 2.13
RAB40C-204ENST00000538492 PSDA5PKW4 1024 aaPredicted RBP28.36■■■□□ 2.13
RAB40C-204ENST00000538492 SLC44A5Q8NCS7 719 aa28.36■■■□□ 2.13
RAB40C-204ENST00000538492 PLCD1P51178 756 aa28.36■■■□□ 2.13
RAB40C-204ENST00000538492 KLHL10Q6JEL2 608 aa28.36■■■□□ 2.13
RAB40C-204ENST00000538492 CCDC34Q96HJ3 373 aa28.36■■■□□ 2.13
RAB40C-204ENST00000538492 TMED8Q6PL24 325 aaPredicted RBP28.35■■■□□ 2.13
RAB40C-204ENST00000538492 ZNF804AQ7Z570 1209 aa28.35■■■□□ 2.13
RAB40C-204ENST00000538492 CCDC94Q9BW85 323 aaPredicted RBP28.35■■■□□ 2.13
RAB40C-204ENST00000538492 SAP30BPQ9UHR5 308 aaKnown RBP28.35■■■□□ 2.13
RAB40C-204ENST00000538492 KCNJ6P48051 423 aa28.34■■■□□ 2.13
RAB40C-204ENST00000538492 PPP4R3BQ5MIZ7 849 aa28.34■■■□□ 2.13
RAB40C-204ENST00000538492 SH3RF1Q7Z6J0 888 aa28.34■■■□□ 2.13
RAB40C-204ENST00000538492 SMYD4Q8IYR2 804 aaPredicted RBP28.34■■■□□ 2.13
RAB40C-204ENST00000538492 DGKHQ86XP1 1220 aa28.34■■■□□ 2.13
RAB40C-204ENST00000538492 MAPKAPK5Q8IW41 473 aa28.34■■■□□ 2.13
RAB40C-204ENST00000538492 THSD7AQ9UPZ6 1657 aa28.34■■■□□ 2.13
RAB40C-204ENST00000538492 LY75O60449 1722 aa28.33■■■□□ 2.13
RAB40C-204ENST00000538492 BAG3O95817 575 aa28.33■■■□□ 2.13
RAB40C-204ENST00000538492 TSPY3P0CV98 308 aa28.33■■■□□ 2.13
RAB40C-204ENST00000538492 TSPY8P0CW00 308 aa28.33■■■□□ 2.13
RAB40C-204ENST00000538492 CD44P16070 742 aaKnown RBP28.33■■■□□ 2.13
RAB40C-204ENST00000538492 STX17P56962 302 aa28.33■■■□□ 2.13
RAB40C-204ENST00000538492 SYT10Q6XYQ8 523 aa28.33■■■□□ 2.13
RAB40C-204ENST00000538492 GPSM2P81274 684 aa28.33■■■□□ 2.13
RAB40C-204ENST00000538492 PRR5LQ6MZQ0 368 aa28.33■■■□□ 2.13
RAB40C-204ENST00000538492 TMX1Q9H3N1 280 aa28.33■■■□□ 2.13
RAB40C-204ENST00000538492 LRRC4BQ9NT99 713 aa28.33■■■□□ 2.13
RAB40C-204ENST00000538492 ZNF215Q9UL58 517 aaPredicted RBP28.33■■■□□ 2.13
RAB40C-204ENST00000538492 KIF2AO00139 706 aaPredicted RBP28.32■■■□□ 2.12
RAB40C-204ENST00000538492 DPYDQ12882 1025 aa28.32■■■□□ 2.12
RAB40C-204ENST00000538492 IL17AQ16552 155 aa28.32■■■□□ 2.12
RAB40C-204ENST00000538492 RASGRP4Q8TDF6 673 aa28.32■■■□□ 2.12
RAB40C-204ENST00000538492 RPGRQ92834 1020 aaKnown RBP28.32■■■□□ 2.12
RAB40C-204ENST00000538492 GSTO1P78417 241 aa28.32■■■□□ 2.12
RAB40C-204ENST00000538492 AMOTL1Q8IY63 956 aa28.32■■■□□ 2.12
RAB40C-204ENST00000538492 STX8Q9UNK0 236 aa28.32■■■□□ 2.12
RAB40C-204ENST00000538492 FAM205AQ6ZU69 1335 aa28.32■■■□□ 2.12
RAB40C-204ENST00000538492 ERCC5P28715 1186 aaPredicted RBP28.31■■■□□ 2.12
RAB40C-204ENST00000538492 NOL12Q9UGY1 213 aaKnown RBP eCLIP28.31■■■□□ 2.12
RAB40C-204ENST00000538492 V9GYY5 206 aaPredicted RBP28.31■■■□□ 2.12
RAB40C-204ENST00000538492 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP28.31■■■□□ 2.12
RAB40C-204ENST00000538492 HOMER1Q86YM7 354 aa28.31■■■□□ 2.12
RAB40C-204ENST00000538492 BLIDQ8IZY5 108 aa28.31■■■□□ 2.12
RAB40C-204ENST00000538492 ZNF444Q8N0Y2 327 aaPredicted RBP28.31■■■□□ 2.12
RAB40C-204ENST00000538492 BLZF1Q9H2G9 400 aa28.31■■■□□ 2.12
RAB40C-204ENST00000538492 UFL1O94874 794 aa28.3■■■□□ 2.12
RAB40C-204ENST00000538492 TRAPPC10P48553 1259 aa28.3■■■□□ 2.12
RAB40C-204ENST00000538492 TYW1BQ6NUM6 668 aa28.3■■■□□ 2.12
RAB40C-204ENST00000538492 MAD2L2Q9UI95 211 aa28.3■■■□□ 2.12
RAB40C-204ENST00000538492 SYCP1Q15431 976 aa28.3■■■□□ 2.12
RAB40C-204ENST00000538492 SPECC1LQ69YQ0 1117 aa28.3■■■□□ 2.12
RAB40C-204ENST00000538492 ADKP55263 362 aaKnown RBP28.29■■■□□ 2.12
RAB40C-204ENST00000538492 TBX2Q13207 712 aaPredicted RBP28.29■■■□□ 2.12
RAB40C-204ENST00000538492 CALML3P27482 149 aa28.29■■■□□ 2.12
RAB40C-204ENST00000538492 CDC25AP30304 524 aa28.29■■■□□ 2.12
RAB40C-204ENST00000538492 GRM4Q14833 912 aa28.29■■■□□ 2.12
RAB40C-204ENST00000538492 GSDMAQ96QA5 445 aa28.29■■■□□ 2.12
RAB40C-204ENST00000538492 SYNRGQ9UMZ2 1314 aa28.29■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms