RNA–Protein interactions for RNA: ENST00000538253.5

PTPN22-211, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

TSL 1 (best) BASIC

Gene PTPN22, Length 3,575 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-211ENST00000538253 UBXN2AP68543 259 aa4.16□□□□□ -1.74
PTPN22-211ENST00000538253 TCP10Q12799 353 aa4.16□□□□□ -1.74
PTPN22-211ENST00000538253 IKQ13123 557 aaPredicted RBP4.16□□□□□ -1.74
PTPN22-211ENST00000538253 BECN1Q14457 450 aa4.16□□□□□ -1.74
PTPN22-211ENST00000538253 CCL15Q16663 113 aa4.16□□□□□ -1.74
PTPN22-211ENST00000538253 UTP14CQ5TAP6 766 aaKnown RBP4.16□□□□□ -1.74
PTPN22-211ENST00000538253 TATDN1Q6P1N9 297 aa4.16□□□□□ -1.74
PTPN22-211ENST00000538253 BLOC1S2Q6QNY1 142 aa4.16□□□□□ -1.74
PTPN22-211ENST00000538253 CWC27Q6UX04 472 aaKnown RBP4.16□□□□□ -1.74
PTPN22-211ENST00000538253 TBC1D9Q6ZT07 1266 aa4.16□□□□□ -1.74
PTPN22-211ENST00000538253 EP400NLQ6ZTU2 488 aa4.16□□□□□ -1.74
PTPN22-211ENST00000538253 EXOC8Q8IYI6 725 aa4.16□□□□□ -1.74
PTPN22-211ENST00000538253 TRIM22Q8IYM9 498 aa4.16□□□□□ -1.74
PTPN22-211ENST00000538253 CUL5Q93034 780 aa4.16□□□□□ -1.74
PTPN22-211ENST00000538253 SEC63Q9UGP8 760 aaKnown RBP4.16□□□□□ -1.74
PTPN22-211ENST00000538253 AGTPBP1Q9UPW5 1226 aa4.16□□□□□ -1.74
PTPN22-211ENST00000538253 CYP46A1Q9Y6A2 500 aa4.16□□□□□ -1.74
PTPN22-211ENST00000538253 TCRBV5S4A2TA0A5A2 114 aa4.16□□□□□ -1.74
PTPN22-211ENST00000538253 STRNO43815 780 aa4.16□□□□□ -1.74
PTPN22-211ENST00000538253 RANBP6O60518 1105 aaKnown RBP4.16□□□□□ -1.74
PTPN22-211ENST00000538253 IGHDP01880 384 aa4.16□□□□□ -1.74
PTPN22-211ENST00000538253 TAF1CQ15572 869 aaPredicted RBP4.16□□□□□ -1.74
PTPN22-211ENST00000538253 TSGA10IPQ3SY00 556 aa4.16□□□□□ -1.74
PTPN22-211ENST00000538253 BRDTQ58F21 947 aaPredicted RBP4.16□□□□□ -1.74
PTPN22-211ENST00000538253 SAPCD2Q86UD0 394 aa4.16□□□□□ -1.74
PTPN22-211ENST00000538253 MSL3Q8N5Y2 521 aaKnown RBP4.16□□□□□ -1.74
PTPN22-211ENST00000538253 GMCL1P1Q8NEA9 526 aa4.16□□□□□ -1.74
PTPN22-211ENST00000538253 NKX2-3Q8TAU0 364 aa4.16□□□□□ -1.74
PTPN22-211ENST00000538253 BICD2Q8TD16 824 aa4.16□□□□□ -1.74
PTPN22-211ENST00000538253 MROH8Q9H579 483 aa4.16□□□□□ -1.74
PTPN22-211ENST00000538253 TLR7Q9NYK1 1049 aaKnown RBP4.16□□□□□ -1.74
PTPN22-211ENST00000538253 PSME4Q14997 1843 aa4.16□□□□□ -1.74
PTPN22-211ENST00000538253 ADM5C9JUS6 153 aa4.15□□□□□ -1.74
PTPN22-211ENST00000538253 BACE1P56817 501 aa4.15□□□□□ -1.74
PTPN22-211ENST00000538253 GSE1Q14687 1217 aa4.15□□□□□ -1.74
PTPN22-211ENST00000538253 WTAPQ15007 396 aa4.15□□□□□ -1.74
PTPN22-211ENST00000538253 RABEP1Q15276 862 aa4.15□□□□□ -1.74
PTPN22-211ENST00000538253 IFIT1BQ5T764 474 aaKnown RBP4.15□□□□□ -1.74
PTPN22-211ENST00000538253 GADL1Q6ZQY3 521 aa4.15□□□□□ -1.74
PTPN22-211ENST00000538253 RASAL3Q86YV0 1011 aa4.15□□□□□ -1.74
PTPN22-211ENST00000538253 LCORLQ8N3X6 602 aa4.15□□□□□ -1.74
PTPN22-211ENST00000538253 CHST13Q8NET6 341 aa4.15□□□□□ -1.74
PTPN22-211ENST00000538253 CCDC148Q8NFR7 591 aa4.15□□□□□ -1.74
PTPN22-211ENST00000538253 ANKS1AQ92625 1134 aa4.15□□□□□ -1.74
PTPN22-211ENST00000538253 MKL1Q969V6 931 aa4.15□□□□□ -1.74
PTPN22-211ENST00000538253 VCPKMTQ9H867 229 aa4.15□□□□□ -1.74
PTPN22-211ENST00000538253 SH2B1Q9NRF2 756 aaPredicted RBP4.15□□□□□ -1.74
PTPN22-211ENST00000538253 FAM198AQ9UFP1 575 aa4.15□□□□□ -1.74
PTPN22-211ENST00000538253 POTECB2RU33 542 aa4.15□□□□□ -1.74
PTPN22-211ENST00000538253 CPLX1O14810 134 aa4.15□□□□□ -1.74
PTPN22-211ENST00000538253 IFIT3O14879 490 aaKnown RBP4.15□□□□□ -1.74
PTPN22-211ENST00000538253 USP2O75604 605 aaPredicted RBP4.15□□□□□ -1.74
PTPN22-211ENST00000538253 BRD1O95696 1058 aa4.15□□□□□ -1.74
PTPN22-211ENST00000538253 ATXN8OSP0DMR3 200 aa4.15□□□□□ -1.74
PTPN22-211ENST00000538253 HSPD1P10809 573 aaKnown RBP4.15□□□□□ -1.74
PTPN22-211ENST00000538253 HOXA7P31268 230 aaPredicted RBP4.15□□□□□ -1.74
PTPN22-211ENST00000538253 LIFRP42702 1097 aa4.15□□□□□ -1.74
PTPN22-211ENST00000538253 HIRAP54198 1017 aaPredicted RBP4.15□□□□□ -1.74
PTPN22-211ENST00000538253 COG2Q14746 738 aa4.15□□□□□ -1.74
PTPN22-211ENST00000538253 CCDC96Q2M329 555 aa4.15□□□□□ -1.74
PTPN22-211ENST00000538253 NBPF12Q5TAG4 269 aaPredicted RBP4.15□□□□□ -1.74
PTPN22-211ENST00000538253 GALNT17Q6IS24 598 aa4.15□□□□□ -1.74
PTPN22-211ENST00000538253 PPP1R18Q6NYC8 613 aa4.15□□□□□ -1.74
PTPN22-211ENST00000538253 DNAJC14Q6Y2X3 702 aaPredicted RBP4.15□□□□□ -1.74
PTPN22-211ENST00000538253 ABRAQ8N0Z2 381 aa4.15□□□□□ -1.74
PTPN22-211ENST00000538253 CEP120Q8N960 986 aa4.15□□□□□ -1.74
PTPN22-211ENST00000538253 OPTNQ96CV9 577 aa4.15□□□□□ -1.74
PTPN22-211ENST00000538253 GMCL1Q96IK5 515 aa4.15□□□□□ -1.74
PTPN22-211ENST00000538253 ADD3Q9UEY8 706 aaKnown RBP4.15□□□□□ -1.74
PTPN22-211ENST00000538253 JAG2Q9Y219 1238 aa4.15□□□□□ -1.74
PTPN22-211ENST00000538253 TMX2Q9Y320 296 aa4.15□□□□□ -1.74
PTPN22-211ENST00000538253 MRPL11Q9Y3B7 192 aaKnown RBP4.15□□□□□ -1.74
PTPN22-211ENST00000538253 ZHX2Q9Y6X8 837 aa4.15□□□□□ -1.74
PTPN22-211ENST00000538253 GSG1L2A8MUP6 293 aa4.15□□□□□ -1.75
PTPN22-211ENST00000538253 UBE2Q2LH0YL09 131 aa4.15□□□□□ -1.75
PTPN22-211ENST00000538253 MSCO60682 206 aa4.15□□□□□ -1.75
PTPN22-211ENST00000538253 FGRP09769 529 aa4.15□□□□□ -1.75
PTPN22-211ENST00000538253 PARP1P09874 1014 aaKnown RBP4.15□□□□□ -1.75
PTPN22-211ENST00000538253 PTPRAP18433 802 aa4.15□□□□□ -1.75
PTPN22-211ENST00000538253 ATP2B2Q01814 1243 aa4.15□□□□□ -1.75
PTPN22-211ENST00000538253 TRIM29Q14134 588 aa4.15□□□□□ -1.75
PTPN22-211ENST00000538253 XRRA1Q6P2D8 792 aa4.15□□□□□ -1.75
PTPN22-211ENST00000538253 CTR9Q6PD62 1173 aa4.15□□□□□ -1.75
PTPN22-211ENST00000538253 RINLQ6ZS11 566 aa4.15□□□□□ -1.75
PTPN22-211ENST00000538253 JMYQ8N9B5 988 aa4.15□□□□□ -1.75
PTPN22-211ENST00000538253 PRPF38AQ8NAV1 312 aaKnown RBP4.15□□□□□ -1.75
PTPN22-211ENST00000538253 MAP4K1Q92918 833 aa4.15□□□□□ -1.75
PTPN22-211ENST00000538253 OSBP2Q969R2 916 aa4.15□□□□□ -1.75
PTPN22-211ENST00000538253 NEK1Q96PY6 1258 aa4.15□□□□□ -1.75
PTPN22-211ENST00000538253 TMEM39BQ9GZU3 492 aa4.15□□□□□ -1.75
PTPN22-211ENST00000538253 ELP3Q9H9T3 547 aa4.15□□□□□ -1.75
PTPN22-211ENST00000538253 SPC25Q9HBM1 224 aa4.15□□□□□ -1.75
PTPN22-211ENST00000538253 STK24Q9Y6E0 443 aa4.15□□□□□ -1.75
PTPN22-211ENST00000538253 A0A0G2JLL6 359 aaPredicted RBP4.14□□□□□ -1.75
PTPN22-211ENST00000538253 SNAP23O00161 211 aa4.14□□□□□ -1.75
PTPN22-211ENST00000538253 ZNF500O60304 480 aaPredicted RBP4.14□□□□□ -1.75
PTPN22-211ENST00000538253 RPLP2P05387 115 aaKnown RBP4.14□□□□□ -1.75
PTPN22-211ENST00000538253 BMP3P12645 472 aa4.14□□□□□ -1.75
PTPN22-211ENST00000538253 SLC1A4P43007 532 aa4.14□□□□□ -1.75
PTPN22-211ENST00000538253 PRELPP51888 382 aa4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms