RNA–Protein interactions for RNA: ENST00000537634.1

CHD4-207, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2

Gene CHD4, Length 691 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-207ENST00000537634 FRMPD3Q5JV73 1810 aa11.67□□□□□ -0.54
CHD4-207ENST00000537634 A0A0G2JMZ2 1700 aa11.66□□□□□ -0.54
CHD4-207ENST00000537634 A0A1W2PRG0 241 aa11.66□□□□□ -0.54
CHD4-207ENST00000537634 PTPREP23469 700 aa11.66□□□□□ -0.54
CHD4-207ENST00000537634 CCND3P30281 292 aaPredicted RBP11.66□□□□□ -0.54
CHD4-207ENST00000537634 ICA1Q05084 483 aa11.66□□□□□ -0.54
CHD4-207ENST00000537634 COG2Q14746 738 aa11.66□□□□□ -0.54
CHD4-207ENST00000537634 MFSD14CQ5VZR4 134 aa11.66□□□□□ -0.54
CHD4-207ENST00000537634 C7orf61Q8IZ16 206 aa11.66□□□□□ -0.54
CHD4-207ENST00000537634 PRO3102Q9H379 93 aa11.66□□□□□ -0.54
CHD4-207ENST00000537634 SH2D4AQ9H788 454 aa11.66□□□□□ -0.54
CHD4-207ENST00000537634 ZNF236Q9UL36 1845 aa11.65□□□□□ -0.54
CHD4-207ENST00000537634 CYP2D7A0A087X1C5 515 aa11.65□□□□□ -0.54
CHD4-207ENST00000537634 A0A1W2PPC1 479 aa11.65□□□□□ -0.54
CHD4-207ENST00000537634 SMARCA5O60264 1052 aaPredicted RBP11.65□□□□□ -0.54
CHD4-207ENST00000537634 AKR1B1P15121 316 aa11.65□□□□□ -0.54
CHD4-207ENST00000537634 MNX1P50219 401 aaPredicted RBP11.65□□□□□ -0.54
CHD4-207ENST00000537634 GRB14Q14449 540 aa11.65□□□□□ -0.54
CHD4-207ENST00000537634 C12orf60Q5U649 245 aa11.65□□□□□ -0.54
CHD4-207ENST00000537634 CLEC10AQ8IUN9 316 aa11.65□□□□□ -0.54
CHD4-207ENST00000537634 LPAR1Q92633 364 aa11.65□□□□□ -0.54
CHD4-207ENST00000537634 GPATCH3Q96I76 525 aa11.65□□□□□ -0.54
CHD4-207ENST00000537634 CCDC17Q96LX7 622 aa11.65□□□□□ -0.54
CHD4-207ENST00000537634 HOXC10Q9NYD6 342 aa11.65□□□□□ -0.54
CHD4-207ENST00000537634 SLC4A4Q9Y6R1 1079 aa11.65□□□□□ -0.54
CHD4-207ENST00000537634 RLFQ13129 1914 aa11.64□□□□□ -0.55
CHD4-207ENST00000537634 USP17L12C9JPN9 530 aa11.64□□□□□ -0.55
CHD4-207ENST00000537634 USP17L21D6R901 530 aa11.64□□□□□ -0.55
CHD4-207ENST00000537634 FLOT1O75955 427 aa11.64□□□□□ -0.55
CHD4-207ENST00000537634 CHGBP05060 677 aa11.64□□□□□ -0.55
CHD4-207ENST00000537634 HOXC6P09630 235 aa11.64□□□□□ -0.55
CHD4-207ENST00000537634 CDK8P49336 464 aa11.64□□□□□ -0.55
CHD4-207ENST00000537634 ATP2B2Q01814 1243 aa11.64□□□□□ -0.55
CHD4-207ENST00000537634 PPP4R3CPQ6ZMV5 832 aa11.64□□□□□ -0.55
CHD4-207ENST00000537634 C16orf86Q6ZW13 317 aa11.64□□□□□ -0.55
CHD4-207ENST00000537634 SPICE1Q8N0Z3 855 aa11.64□□□□□ -0.55
CHD4-207ENST00000537634 MB21D1Q8N884 522 aa11.64□□□□□ -0.55
CHD4-207ENST00000537634 MOV10L1Q9BXT6 1211 aaKnown RBP11.64□□□□□ -0.55
CHD4-207ENST00000537634 SPATC1LQ9H0A9 340 aa11.64□□□□□ -0.55
CHD4-207ENST00000537634 ECHDC1Q9NTX5 307 aa11.64□□□□□ -0.55
CHD4-207ENST00000537634 FLRT1Q9NZU1 646 aa11.64□□□□□ -0.55
CHD4-207ENST00000537634 ARPP21Q9UBL0 812 aaPredicted RBP11.64□□□□□ -0.55
CHD4-207ENST00000537634 ZMYND8Q9ULU4 1186 aaPredicted RBP11.64□□□□□ -0.55
CHD4-207ENST00000537634 TMX2Q9Y320 296 aa11.64□□□□□ -0.55
CHD4-207ENST00000537634 PFASO15067 1338 aa11.63□□□□□ -0.55
CHD4-207ENST00000537634 PARP14Q460N5 1801 aa11.63□□□□□ -0.55
CHD4-207ENST00000537634 WDR46O15213 610 aaKnown RBP11.63□□□□□ -0.55
CHD4-207ENST00000537634 STRNO43815 780 aa11.63□□□□□ -0.55
CHD4-207ENST00000537634 CNGA1P29973 690 aa11.63□□□□□ -0.55
CHD4-207ENST00000537634 PLS1Q14651 629 aa11.63□□□□□ -0.55
CHD4-207ENST00000537634 KIAA1755Q5JYT7 1200 aa11.63□□□□□ -0.55
CHD4-207ENST00000537634 LHX8Q68G74 356 aa11.63□□□□□ -0.55
CHD4-207ENST00000537634 SAMD1Q6SPF0 538 aaPredicted RBP11.63□□□□□ -0.55
CHD4-207ENST00000537634 DPP9Q86TI2 863 aa11.63□□□□□ -0.55
CHD4-207ENST00000537634 SHCBP1Q8NEM2 672 aa11.63□□□□□ -0.55
CHD4-207ENST00000537634 PUS7LQ9H0K6 701 aaKnown RBP11.63□□□□□ -0.55
CHD4-207ENST00000537634 VCPKMTQ9H867 229 aa11.63□□□□□ -0.55
CHD4-207ENST00000537634 STAP2Q9UGK3 403 aa11.63□□□□□ -0.55
CHD4-207ENST00000537634 SMIM22K7EJ46 135 aa11.62□□□□□ -0.55
CHD4-207ENST00000537634 MSCO60682 206 aa11.62□□□□□ -0.55
CHD4-207ENST00000537634 COL6A1P12109 1028 aa11.62□□□□□ -0.55
CHD4-207ENST00000537634 SYN1P17600 705 aa11.62□□□□□ -0.55
CHD4-207ENST00000537634 ERCC3P19447 782 aa11.62□□□□□ -0.55
CHD4-207ENST00000537634 ADORA2AP29274 412 aa11.62□□□□□ -0.55
CHD4-207ENST00000537634 DSG3P32926 999 aa11.62□□□□□ -0.55
CHD4-207ENST00000537634 CYP2C19P33261 490 aa11.62□□□□□ -0.55
CHD4-207ENST00000537634 CTR9Q6PD62 1173 aa11.62□□□□□ -0.55
CHD4-207ENST00000537634 KBTBD3Q8NAB2 608 aa11.62□□□□□ -0.55
CHD4-207ENST00000537634 NPLOC4Q8TAT6 608 aa11.62□□□□□ -0.55
CHD4-207ENST00000537634 ATG4CQ96DT6 458 aa11.62□□□□□ -0.55
CHD4-207ENST00000537634 MROH8Q9H579 483 aa11.62□□□□□ -0.55
CHD4-207ENST00000537634 KANSL2Q9H9L4 492 aa11.62□□□□□ -0.55
CHD4-207ENST00000537634 GOPCQ9HD26 462 aa11.62□□□□□ -0.55
CHD4-207ENST00000537634 SLC5A4Q9NY91 659 aa11.62□□□□□ -0.55
CHD4-207ENST00000537634 DDX20Q9UHI6 824 aaKnown RBP11.62□□□□□ -0.55
CHD4-207ENST00000537634 COL11A1P12107 1806 aaPredicted RBP11.61□□□□□ -0.55
CHD4-207ENST00000537634 RAD21O60216 631 aa11.61□□□□□ -0.55
CHD4-207ENST00000537634 EEF2P13639 858 aaKnown RBP11.61□□□□□ -0.55
CHD4-207ENST00000537634 OLFML2BQ68BL8 750 aa11.61□□□□□ -0.55
CHD4-207ENST00000537634 NCAPG2Q86XI2 1143 aa11.61□□□□□ -0.55
CHD4-207ENST00000537634 SIAH1Q8IUQ4 282 aa11.61□□□□□ -0.55
CHD4-207ENST00000537634 APPBP2Q92624 585 aa11.61□□□□□ -0.55
CHD4-207ENST00000537634 GDF15Q99988 308 aa11.61□□□□□ -0.55
CHD4-207ENST00000537634 DCTPP1Q9H773 170 aa11.61□□□□□ -0.55
CHD4-207ENST00000537634 GREB1LQ9C091 1923 aaPredicted RBP11.6□□□□□ -0.55
CHD4-207ENST00000537634 RNF113AO15541 343 aaKnown RBP11.6□□□□□ -0.55
CHD4-207ENST00000537634 ZFYP08048 801 aaPredicted RBP11.6□□□□□ -0.55
CHD4-207ENST00000537634 CYBAP13498 195 aa11.6□□□□□ -0.55
CHD4-207ENST00000537634 BMP8BP34820 402 aa11.6□□□□□ -0.55
CHD4-207ENST00000537634 LRRC26Q2I0M4 334 aa11.6□□□□□ -0.55
CHD4-207ENST00000537634 LRRFIP1Q32MZ4 808 aaKnown RBP11.6□□□□□ -0.55
CHD4-207ENST00000537634 TSHZ3Q63HK5 1081 aa11.6□□□□□ -0.55
CHD4-207ENST00000537634 GIMAP6Q6P9H5 292 aa11.6□□□□□ -0.55
CHD4-207ENST00000537634 ABRAQ8N0Z2 381 aa11.6□□□□□ -0.55
CHD4-207ENST00000537634 STRBPQ96SI9 672 aaKnown RBP11.6□□□□□ -0.55
CHD4-207ENST00000537634 MKNK2Q9HBH9 465 aa11.6□□□□□ -0.55
CHD4-207ENST00000537634 ROBO3Q96MS0 1386 aa11.59□□□□□ -0.55
CHD4-207ENST00000537634 GSG1L2A8MUP6 293 aa11.59□□□□□ -0.55
CHD4-207ENST00000537634 MINDY4BA8MYZ0 360 aa11.59□□□□□ -0.55
CHD4-207ENST00000537634 DNM1LO00429 736 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms