RNA–Protein interactions for RNA: ENST00000537582.1

SFSWAP-206, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 1,576 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-206ENST00000537582 HSP90AA1P07900 732 aaKnown RBP18.29■□□□□ 0.52
SFSWAP-206ENST00000537582 VGLL4Q14135 290 aa18.29■□□□□ 0.52
SFSWAP-206ENST00000537582 TTLL12Q14166 644 aaPredicted RBP18.29■□□□□ 0.52
SFSWAP-206ENST00000537582 KIAA1755Q5JYT7 1200 aa18.29■□□□□ 0.52
SFSWAP-206ENST00000537582 CHADLQ6NUI6 762 aa18.29■□□□□ 0.52
SFSWAP-206ENST00000537582 CLMNQ96JQ2 1002 aa18.29■□□□□ 0.52
SFSWAP-206ENST00000537582 DOCK1Q14185 1865 aa18.29■□□□□ 0.52
SFSWAP-206ENST00000537582 PPP1R12BO60237 982 aaPredicted RBP18.28■□□□□ 0.52
SFSWAP-206ENST00000537582 PLEKHA8P1O95397 391 aa18.28■□□□□ 0.52
SFSWAP-206ENST00000537582 ITGBL1O95965 494 aaPredicted RBP18.28■□□□□ 0.52
SFSWAP-206ENST00000537582 GOLGA8HP0CJ92 632 aa18.28■□□□□ 0.52
SFSWAP-206ENST00000537582 NF2P35240 595 aa18.28■□□□□ 0.52
SFSWAP-206ENST00000537582 DGKZQ13574 1117 aa18.28■□□□□ 0.52
SFSWAP-206ENST00000537582 ZYXQ15942 572 aaKnown RBP18.28■□□□□ 0.52
SFSWAP-206ENST00000537582 RTN1Q16799 776 aa18.28■□□□□ 0.52
SFSWAP-206ENST00000537582 STAG2Q8N3U4 1231 aa18.28■□□□□ 0.52
SFSWAP-206ENST00000537582 FANCBQ8NB91 859 aa18.28■□□□□ 0.52
SFSWAP-206ENST00000537582 CNKSR2Q8WXI2 1034 aa18.28■□□□□ 0.52
SFSWAP-206ENST00000537582 SNCAIPQ9Y6H5 919 aa18.28■□□□□ 0.52
SFSWAP-206ENST00000537582 NID2Q14112 1375 aa18.28■□□□□ 0.52
SFSWAP-206ENST00000537582 UBE2Q2LH0YL09 131 aa18.27■□□□□ 0.52
SFSWAP-206ENST00000537582 RAD21O60216 631 aa18.27■□□□□ 0.52
SFSWAP-206ENST00000537582 PTPRAP18433 802 aa18.27■□□□□ 0.52
SFSWAP-206ENST00000537582 MAP3K9P80192 1104 aa18.27■□□□□ 0.52
SFSWAP-206ENST00000537582 USP17L2Q6R6M4 530 aa18.27■□□□□ 0.52
SFSWAP-206ENST00000537582 NSUN7Q8NE18 718 aaKnown RBP18.27■□□□□ 0.52
SFSWAP-206ENST00000537582 MKL1Q969V6 931 aa18.27■□□□□ 0.52
SFSWAP-206ENST00000537582 CPVLQ9H3G5 476 aa18.27■□□□□ 0.52
SFSWAP-206ENST00000537582 MYH4Q9Y623 1939 aa18.27■□□□□ 0.51
SFSWAP-206ENST00000537582 FRMPD2Q68DX3 1309 aaPredicted RBP18.27■□□□□ 0.51
SFSWAP-206ENST00000537582 PDHBP11177 359 aa18.26■□□□□ 0.51
SFSWAP-206ENST00000537582 GRM4Q14833 912 aa18.26■□□□□ 0.51
SFSWAP-206ENST00000537582 SLC35G1Q2M3R5 365 aa18.26■□□□□ 0.51
SFSWAP-206ENST00000537582 NOL9Q5SY16 702 aaKnown RBP18.26■□□□□ 0.51
SFSWAP-206ENST00000537582 SPICE1Q8N0Z3 855 aa18.26■□□□□ 0.51
SFSWAP-206ENST00000537582 CCDC82Q8N4S0 544 aa18.26■□□□□ 0.51
SFSWAP-206ENST00000537582 DDX11Q96FC9 970 aa18.26■□□□□ 0.51
SFSWAP-206ENST00000537582 NUP88Q99567 741 aaPredicted RBP18.26■□□□□ 0.51
SFSWAP-206ENST00000537582 PICK1Q9NRD5 415 aa18.26■□□□□ 0.51
SFSWAP-206ENST00000537582 MAD2L2Q9UI95 211 aa18.26■□□□□ 0.51
SFSWAP-206ENST00000537582 PTPDC1A2A3K4 754 aa18.25■□□□□ 0.51
SFSWAP-206ENST00000537582 NDUFB10O96000 172 aa18.25■□□□□ 0.51
SFSWAP-206ENST00000537582 NTRK3Q16288 839 aa18.25■□□□□ 0.51
SFSWAP-206ENST00000537582 NBPF11Q86T75 865 aa18.25■□□□□ 0.51
SFSWAP-206ENST00000537582 PHKBQ93100 1093 aa18.25■□□□□ 0.51
SFSWAP-206ENST00000537582 ARHGEF10LQ9HCE6 1279 aa18.25■□□□□ 0.51
SFSWAP-206ENST00000537582 TMX2Q9Y320 296 aa18.25■□□□□ 0.51
SFSWAP-206ENST00000537582 F5H6K3 240 aa18.25■□□□□ 0.51
SFSWAP-206ENST00000537582 CELF2O95319 508 aaKnown RBP18.25■□□□□ 0.51
SFSWAP-206ENST00000537582 CALM1P0DP23 149 aa18.25■□□□□ 0.51
SFSWAP-206ENST00000537582 CALM2P0DP24 149 aa18.25■□□□□ 0.51
SFSWAP-206ENST00000537582 CALM3P0DP25 149 aa18.25■□□□□ 0.51
SFSWAP-206ENST00000537582 IREB2P48200 963 aaKnown RBP18.25■□□□□ 0.51
SFSWAP-206ENST00000537582 KLRC3Q07444 240 aa18.25■□□□□ 0.51
SFSWAP-206ENST00000537582 CST9Q5W186 159 aa18.25■□□□□ 0.51
SFSWAP-206ENST00000537582 CTCFLQ8NI51 663 aaPredicted RBP18.25■□□□□ 0.51
SFSWAP-206ENST00000537582 INTS4Q96HW7 963 aaKnown RBP18.25■□□□□ 0.51
SFSWAP-206ENST00000537582 ELP3Q9H9T3 547 aa18.25■□□□□ 0.51
SFSWAP-206ENST00000537582 RCAN1P53805 252 aa18.24■□□□□ 0.51
SFSWAP-206ENST00000537582 FUT2Q10981 343 aa18.24■□□□□ 0.51
SFSWAP-206ENST00000537582 SPP2Q13103 211 aa18.24■□□□□ 0.51
SFSWAP-206ENST00000537582 MAP3K11Q16584 847 aa18.24■□□□□ 0.51
SFSWAP-206ENST00000537582 SLFN13Q68D06 897 aa18.24■□□□□ 0.51
SFSWAP-206ENST00000537582 TMTC3Q6ZXV5 915 aa18.24■□□□□ 0.51
SFSWAP-206ENST00000537582 SRBD1Q8N5C6 995 aaKnown RBP18.24■□□□□ 0.51
SFSWAP-206ENST00000537582 GPCPD1Q9NPB8 672 aa18.24■□□□□ 0.51
SFSWAP-206ENST00000537582 ZHX2Q9Y6X8 837 aa18.24■□□□□ 0.51
SFSWAP-206ENST00000537582 hCG_1642624A0A1W2PR95 340 aa18.23■□□□□ 0.51
SFSWAP-206ENST00000537582 PALM3A6NDB9 673 aaPredicted RBP18.23■□□□□ 0.51
SFSWAP-206ENST00000537582 TRIM75PA6NK02 468 aa18.23■□□□□ 0.51
SFSWAP-206ENST00000537582 CPLX1O14810 134 aa18.23■□□□□ 0.51
SFSWAP-206ENST00000537582 SNHG28P0DPA3 235 aa18.23■□□□□ 0.51
SFSWAP-206ENST00000537582 FDPSP14324 419 aaKnown RBP18.23■□□□□ 0.51
SFSWAP-206ENST00000537582 YY1P25490 414 aa18.23■□□□□ 0.51
SFSWAP-206ENST00000537582 GJB2P29033 226 aa18.23■□□□□ 0.51
SFSWAP-206ENST00000537582 MTMR2Q13614 643 aa18.23■□□□□ 0.51
SFSWAP-206ENST00000537582 PPP4R3BQ5MIZ7 849 aa18.23■□□□□ 0.51
SFSWAP-206ENST00000537582 TTBK2Q6IQ55 1244 aa18.23■□□□□ 0.51
SFSWAP-206ENST00000537582 KCTD1Q719H9 257 aa18.23■□□□□ 0.51
SFSWAP-206ENST00000537582 ARMC9Q7Z3E5 817 aa18.23■□□□□ 0.51
SFSWAP-206ENST00000537582 GMCL1P1Q8NEA9 526 aa18.23■□□□□ 0.51
SFSWAP-206ENST00000537582 SMARCC2Q8TAQ2 1214 aa18.23■□□□□ 0.51
SFSWAP-206ENST00000537582 FEZ1Q99689 392 aa18.23■□□□□ 0.51
SFSWAP-206ENST00000537582 GINM1Q9NU53 330 aa18.23■□□□□ 0.51
SFSWAP-206ENST00000537582 SMC3Q9UQE7 1217 aa18.23■□□□□ 0.51
SFSWAP-206ENST00000537582 CSADQ9Y600 493 aa18.23■□□□□ 0.51
SFSWAP-206ENST00000537582 PARP1P09874 1014 aaKnown RBP18.22■□□□□ 0.51
SFSWAP-206ENST00000537582 CCDC96Q2M329 555 aa18.22■□□□□ 0.51
SFSWAP-206ENST00000537582 LDLRAD1Q5T700 205 aa18.22■□□□□ 0.51
SFSWAP-206ENST00000537582 ANKRD13AQ8IZ07 590 aa18.22■□□□□ 0.51
SFSWAP-206ENST00000537582 PIBF1Q8WXW3 757 aa18.22■□□□□ 0.51
SFSWAP-206ENST00000537582 GBA2Q9HCG7 927 aaPredicted RBP18.22■□□□□ 0.51
SFSWAP-206ENST00000537582 ISY1Q9ULR0 285 aaKnown RBP18.22■□□□□ 0.51
SFSWAP-206ENST00000537582 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.22■□□□□ 0.51
SFSWAP-206ENST00000537582 PHIPQ8WWQ0 1821 aa18.22■□□□□ 0.51
SFSWAP-206ENST00000537582 DDIT3P35638 169 aa18.21■□□□□ 0.51
SFSWAP-206ENST00000537582 FOSBP53539 338 aa18.21■□□□□ 0.51
SFSWAP-206ENST00000537582 ZNF543Q08ER8 600 aa18.21■□□□□ 0.51
SFSWAP-206ENST00000537582 ZNF784Q8NCA9 323 aaPredicted RBP18.21■□□□□ 0.51
SFSWAP-206ENST00000537582 ZNF280CQ8ND82 737 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 100.1 ms