RNA–Protein interactions for RNA: ENST00000537556.1

SRGAP1-202, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 2

Gene SRGAP1, Length 2,976 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-202ENST00000537556 PPP1R15BQ5SWA1 713 aa9.51□□□□□ -0.89
SRGAP1-202ENST00000537556 NUTM2GQ5VZR2 741 aa9.51□□□□□ -0.89
SRGAP1-202ENST00000537556 LMNTD2Q8IXW0 634 aa9.51□□□□□ -0.89
SRGAP1-202ENST00000537556 CCT6BQ92526 530 aa9.51□□□□□ -0.89
SRGAP1-202ENST00000537556 TMEM165Q9HC07 324 aa9.51□□□□□ -0.89
SRGAP1-202ENST00000537556 POLR3EQ9NVU0 708 aa9.51□□□□□ -0.89
SRGAP1-202ENST00000537556 MYH15Q9Y2K3 1946 aa9.5□□□□□ -0.89
SRGAP1-202ENST00000537556 SETBP1Q9Y6X0 1596 aa9.5□□□□□ -0.89
SRGAP1-202ENST00000537556 SURF6O75683 361 aaKnown RBP9.5□□□□□ -0.89
SRGAP1-202ENST00000537556 HMOX1P09601 288 aa9.5□□□□□ -0.89
SRGAP1-202ENST00000537556 PFKFB1P16118 471 aa9.5□□□□□ -0.89
SRGAP1-202ENST00000537556 POLD1P28340 1107 aa9.5□□□□□ -0.89
SRGAP1-202ENST00000537556 ZNF268Q14587 947 aaPredicted RBP9.5□□□□□ -0.89
SRGAP1-202ENST00000537556 LBRQ14739 615 aaKnown RBP9.5□□□□□ -0.89
SRGAP1-202ENST00000537556 KIAA0825Q8IV33 1275 aa9.5□□□□□ -0.89
SRGAP1-202ENST00000537556 NOC3LQ8WTT2 800 aaKnown RBP9.5□□□□□ -0.89
SRGAP1-202ENST00000537556 DYDC1Q8WWB3 177 aa9.5□□□□□ -0.89
SRGAP1-202ENST00000537556 ZIM3Q96PE6 472 aa9.5□□□□□ -0.89
SRGAP1-202ENST00000537556 SLX1AQ9BQ83 275 aa9.5□□□□□ -0.89
SRGAP1-202ENST00000537556 NFE2L3Q9Y4A8 694 aa9.5□□□□□ -0.89
SRGAP1-202ENST00000537556 QRICH2Q9H0J4 1663 aa9.5□□□□□ -0.89
SRGAP1-202ENST00000537556 N4BP3O15049 544 aa9.5□□□□□ -0.89
SRGAP1-202ENST00000537556 MFAP3LO75121 409 aa9.5□□□□□ -0.89
SRGAP1-202ENST00000537556 ATP2C2O75185 946 aa9.5□□□□□ -0.89
SRGAP1-202ENST00000537556 ATP6V1G1O75348 118 aa9.5□□□□□ -0.89
SRGAP1-202ENST00000537556 ZNF18P17022 549 aa9.5□□□□□ -0.89
SRGAP1-202ENST00000537556 RBL2Q08999 1139 aa9.5□□□□□ -0.89
SRGAP1-202ENST00000537556 CD302Q8IX05 232 aa9.5□□□□□ -0.89
SRGAP1-202ENST00000537556 TMTC2Q8N394 836 aa9.5□□□□□ -0.89
SRGAP1-202ENST00000537556 ENOX1Q8TC92 643 aaKnown RBP9.5□□□□□ -0.89
SRGAP1-202ENST00000537556 RRP36Q96EU6 259 aaKnown RBP9.5□□□□□ -0.89
SRGAP1-202ENST00000537556 GPATCH3Q96I76 525 aa9.5□□□□□ -0.89
SRGAP1-202ENST00000537556 ATP6V1G3Q96LB4 118 aa9.5□□□□□ -0.89
SRGAP1-202ENST00000537556 HAUS4Q9H6D7 363 aa9.5□□□□□ -0.89
SRGAP1-202ENST00000537556 LEMD3Q9Y2U8 911 aa9.5□□□□□ -0.89
SRGAP1-202ENST00000537556 C2CD2Q9Y426 696 aa9.5□□□□□ -0.89
SRGAP1-202ENST00000537556 ARAP3Q8WWN8 1544 aa9.5□□□□□ -0.89
SRGAP1-202ENST00000537556 USP42Q9H9J4 1324 aaKnown RBP9.49□□□□□ -0.89
SRGAP1-202ENST00000537556 GPR75-ASB3A0A0A6YYF3 556 aa9.49□□□□□ -0.89
SRGAP1-202ENST00000537556 A0A1B0GTH6 734 aa9.49□□□□□ -0.89
SRGAP1-202ENST00000537556 DPPA5A6NC42 116 aa9.49□□□□□ -0.89
SRGAP1-202ENST00000537556 FYB1O15117 783 aa9.49□□□□□ -0.89
SRGAP1-202ENST00000537556 TPD52L2O43399 206 aaKnown RBP9.49□□□□□ -0.89
SRGAP1-202ENST00000537556 KRT14P02533 472 aa9.49□□□□□ -0.89
SRGAP1-202ENST00000537556 DESP17661 470 aa9.49□□□□□ -0.89
SRGAP1-202ENST00000537556 EIF2S2P20042 333 aaKnown RBP9.49□□□□□ -0.89
SRGAP1-202ENST00000537556 CCNG1P51959 295 aa9.49□□□□□ -0.89
SRGAP1-202ENST00000537556 TMED1Q13445 227 aa9.49□□□□□ -0.89
SRGAP1-202ENST00000537556 ZMYM1Q5SVZ6 1142 aa9.49□□□□□ -0.89
SRGAP1-202ENST00000537556 CYP26C1Q6V0L0 522 aa9.49□□□□□ -0.89
SRGAP1-202ENST00000537556 MMGT1Q8N4V1 131 aa9.49□□□□□ -0.89
SRGAP1-202ENST00000537556 GBP7Q8N8V2 638 aaPredicted RBP9.49□□□□□ -0.89
SRGAP1-202ENST00000537556 SSH3Q8TE77 659 aa9.49□□□□□ -0.89
SRGAP1-202ENST00000537556 AGAP11Q8TF27 550 aa9.49□□□□□ -0.89
SRGAP1-202ENST00000537556 JAKMIP2Q96AA8 810 aa9.49□□□□□ -0.89
SRGAP1-202ENST00000537556 EVI5LQ96CN4 794 aa9.49□□□□□ -0.89
SRGAP1-202ENST00000537556 CAPZA3Q96KX2 299 aa9.49□□□□□ -0.89
SRGAP1-202ENST00000537556 ZWILCHQ9H900 591 aa9.49□□□□□ -0.89
SRGAP1-202ENST00000537556 ASB3Q9Y575 518 aa9.49□□□□□ -0.89
SRGAP1-202ENST00000537556 UGGT1Q9NYU2 1555 aa9.49□□□□□ -0.89
SRGAP1-202ENST00000537556 ADGRB1O14514 1584 aa9.49□□□□□ -0.89
SRGAP1-202ENST00000537556 C5orf60A6NFR6 353 aa9.49□□□□□ -0.89
SRGAP1-202ENST00000537556 M0R2C6 588 aa9.49□□□□□ -0.89
SRGAP1-202ENST00000537556 TRAPPC3O43617 180 aa9.49□□□□□ -0.89
SRGAP1-202ENST00000537556 ALADP13716 330 aa9.49□□□□□ -0.89
SRGAP1-202ENST00000537556 FECHP22830 423 aa9.49□□□□□ -0.89
SRGAP1-202ENST00000537556 SCNN1BP51168 640 aa9.49□□□□□ -0.89
SRGAP1-202ENST00000537556 VAV2P52735 878 aa9.49□□□□□ -0.89
SRGAP1-202ENST00000537556 MYBPC3Q14896 1274 aa9.49□□□□□ -0.89
SRGAP1-202ENST00000537556 IFI16Q16666 785 aaKnown RBP9.49□□□□□ -0.89
SRGAP1-202ENST00000537556 SPRED3Q2MJR0 410 aa9.49□□□□□ -0.89
SRGAP1-202ENST00000537556 ANKS4BQ8N8V4 417 aa9.49□□□□□ -0.89
SRGAP1-202ENST00000537556 CPLX3Q8WVH0 158 aa9.49□□□□□ -0.89
SRGAP1-202ENST00000537556 C17orf50Q8WW18 174 aa9.49□□□□□ -0.89
SRGAP1-202ENST00000537556 NAF1Q96HR8 494 aaKnown RBP9.49□□□□□ -0.89
SRGAP1-202ENST00000537556 FAM167BQ9BTA0 163 aa9.49□□□□□ -0.89
SRGAP1-202ENST00000537556 YIPF2Q9BWQ6 316 aa9.49□□□□□ -0.89
SRGAP1-202ENST00000537556 F6X3S4 739 aa9.48□□□□□ -0.89
SRGAP1-202ENST00000537556 ITIH3Q06033 890 aa9.48□□□□□ -0.89
SRGAP1-202ENST00000537556 PAK2Q13177 524 aa9.48□□□□□ -0.89
SRGAP1-202ENST00000537556 TAF11Q15544 211 aa9.48□□□□□ -0.89
SRGAP1-202ENST00000537556 SGSM1Q2NKQ1 1148 aa9.48□□□□□ -0.89
SRGAP1-202ENST00000537556 ANKRD20A2Q5SQ80 823 aa9.48□□□□□ -0.89
SRGAP1-202ENST00000537556 ANKRD20A1Q5TYW2 823 aa9.48□□□□□ -0.89
SRGAP1-202ENST00000537556 ANKRD20A3Q5VUR7 823 aa9.48□□□□□ -0.89
SRGAP1-202ENST00000537556 DPY19L2Q6NUT2 758 aa9.48□□□□□ -0.89
SRGAP1-202ENST00000537556 APBB1IPQ7Z5R6 666 aaPredicted RBP9.48□□□□□ -0.89
SRGAP1-202ENST00000537556 RNF168Q8IYW5 571 aaPredicted RBP9.48□□□□□ -0.89
SRGAP1-202ENST00000537556 SYCP3Q8IZU3 236 aa9.48□□□□□ -0.89
SRGAP1-202ENST00000537556 NSUN7Q8NE18 718 aaKnown RBP9.48□□□□□ -0.89
SRGAP1-202ENST00000537556 MAIP1Q8WWC4 291 aa9.48□□□□□ -0.89
SRGAP1-202ENST00000537556 C8orf76Q96K31 380 aa9.48□□□□□ -0.89
SRGAP1-202ENST00000537556 CTAGE1Q96RT6 745 aa9.48□□□□□ -0.89
SRGAP1-202ENST00000537556 NDST4Q9H3R1 872 aa9.48□□□□□ -0.89
SRGAP1-202ENST00000537556 GUCA1BQ9UMX6 200 aa9.48□□□□□ -0.89
SRGAP1-202ENST00000537556 CEP131Q9UPN4 1083 aa9.48□□□□□ -0.89
SRGAP1-202ENST00000537556 PHF24Q9UPV7 400 aa9.48□□□□□ -0.89
SRGAP1-202ENST00000537556 ARHGEF10O15013 1369 aa9.48□□□□□ -0.89
SRGAP1-202ENST00000537556 ENC1O14682 589 aa9.48□□□□□ -0.89
SRGAP1-202ENST00000537556 TRIM37O94972 964 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms