RNA–Protein interactions for RNA: ENST00000537466.6

GPN3-202, Transcript of GPN-loop GTPase 3, humanhuman

TSL 1 (best) BASIC

Gene GPN3, Length 1,491 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-202ENST00000537466 PTCH2Q9Y6C5 1203 aa20.59■□□□□ 0.89
GPN3-202ENST00000537466 A0A0G2JMZ2 1700 aa20.59■□□□□ 0.89
GPN3-202ENST00000537466 IGKV6D-41A0A0C4DH26 115 aa20.58■□□□□ 0.89
GPN3-202ENST00000537466 GNRH1P01148 92 aa20.58■□□□□ 0.89
GPN3-202ENST00000537466 MFAP1P55081 439 aaKnown RBP20.58■□□□□ 0.89
GPN3-202ENST00000537466 FCGRTP55899 365 aa20.58■□□□□ 0.89
GPN3-202ENST00000537466 FAM47AQ5JRC9 791 aa20.58■□□□□ 0.89
GPN3-202ENST00000537466 SPICE1Q8N0Z3 855 aa20.58■□□□□ 0.89
GPN3-202ENST00000537466 VCPKMTQ9H867 229 aa20.58■□□□□ 0.89
GPN3-202ENST00000537466 ZMYM6O95789 1325 aa20.58■□□□□ 0.88
GPN3-202ENST00000537466 SH2D4AQ9H788 454 aa20.57■□□□□ 0.88
GPN3-202ENST00000537466 RBPJLQ9UBG7 517 aa20.57■□□□□ 0.88
GPN3-202ENST00000537466 MORF4L1Q9UBU8 362 aa20.57■□□□□ 0.88
GPN3-202ENST00000537466 SRRDQ9UH36 339 aa20.57■□□□□ 0.88
GPN3-202ENST00000537466 PLIN4Q96Q06 1357 aa20.57■□□□□ 0.88
GPN3-202ENST00000537466 CEP95Q96GE4 821 aa20.56■□□□□ 0.88
GPN3-202ENST00000537466 GABRQQ9UN88 632 aa20.56■□□□□ 0.88
GPN3-202ENST00000537466 TSPY3P0CV98 308 aa20.56■□□□□ 0.88
GPN3-202ENST00000537466 TSPY8P0CW00 308 aa20.56■□□□□ 0.88
GPN3-202ENST00000537466 HAND2P61296 217 aa20.56■□□□□ 0.88
GPN3-202ENST00000537466 TFAP4Q01664 338 aa20.56■□□□□ 0.88
GPN3-202ENST00000537466 PRKCZQ05513 592 aa20.56■□□□□ 0.88
GPN3-202ENST00000537466 NEDD1Q8NHV4 660 aa20.56■□□□□ 0.88
GPN3-202ENST00000537466 LPAR1Q92633 364 aa20.56■□□□□ 0.88
GPN3-202ENST00000537466 PAGR1Q9BTK6 254 aa20.56■□□□□ 0.88
GPN3-202ENST00000537466 TANGO6Q9C0B7 1094 aa20.56■□□□□ 0.88
GPN3-202ENST00000537466 NBPF3Q9H094 633 aa20.56■□□□□ 0.88
GPN3-202ENST00000537466 NYAP2Q9P242 653 aa20.56■□□□□ 0.88
GPN3-202ENST00000537466 MYPNQ86TC9 1320 aa20.55■□□□□ 0.88
GPN3-202ENST00000537466 SPDYE16A6NNV3 312 aaPredicted RBP20.55■□□□□ 0.88
GPN3-202ENST00000537466 TNPO2O14787 897 aaKnown RBP20.55■□□□□ 0.88
GPN3-202ENST00000537466 CNMDO75829 334 aa20.55■□□□□ 0.88
GPN3-202ENST00000537466 CHMLP26374 656 aa20.55■□□□□ 0.88
GPN3-202ENST00000537466 Q3C1V9 767 aa20.55■□□□□ 0.88
GPN3-202ENST00000537466 CCDC136Q96JN2 1154 aa20.55■□□□□ 0.88
GPN3-202ENST00000537466 MTMR4Q9NYA4 1195 aa20.55■□□□□ 0.88
GPN3-202ENST00000537466 CLIP2Q9UDT6 1046 aa20.55■□□□□ 0.88
GPN3-202ENST00000537466 RBBP6Q7Z6E9 1792 aaKnown RBP20.54■□□□□ 0.88
GPN3-202ENST00000537466 NEFLP07196 543 aa20.54■□□□□ 0.88
GPN3-202ENST00000537466 FGRP09769 529 aa20.54■□□□□ 0.88
GPN3-202ENST00000537466 HOXD10P28358 340 aa20.54■□□□□ 0.88
GPN3-202ENST00000537466 PRMT2P55345 433 aa20.54■□□□□ 0.88
GPN3-202ENST00000537466 ERVK-9P63128 1117 aa20.54■□□□□ 0.88
GPN3-202ENST00000537466 ERVK-24P63145 666 aa20.54■□□□□ 0.88
GPN3-202ENST00000537466 GPRC5AQ8NFJ5 357 aa20.54■□□□□ 0.88
GPN3-202ENST00000537466 GTF3C2Q8WUA4 911 aaPredicted RBP20.54■□□□□ 0.88
GPN3-202ENST00000537466 GOPCQ9HD26 462 aa20.54■□□□□ 0.88
GPN3-202ENST00000537466 WDR46O15213 610 aaKnown RBP20.53■□□□□ 0.88
GPN3-202ENST00000537466 ORC4O43929 436 aa20.53■□□□□ 0.88
GPN3-202ENST00000537466 RAD21O60216 631 aa20.53■□□□□ 0.88
GPN3-202ENST00000537466 LBX2Q6XYB7 198 aa20.53■□□□□ 0.88
GPN3-202ENST00000537466 DSCC1Q9BVC3 393 aa20.53■□□□□ 0.88
GPN3-202ENST00000537466 TSPY2A6NKD2 308 aa20.52■□□□□ 0.88
GPN3-202ENST00000537466 RANBP6O60518 1105 aaKnown RBP20.52■□□□□ 0.88
GPN3-202ENST00000537466 SOX10P56693 466 aa20.52■□□□□ 0.88
GPN3-202ENST00000537466 COG2Q14746 738 aa20.52■□□□□ 0.88
GPN3-202ENST00000537466 SLC9C1Q4G0N8 1177 aa20.52■□□□□ 0.88
GPN3-202ENST00000537466 TBC1D10CQ8IV04 446 aa20.52■□□□□ 0.88
GPN3-202ENST00000537466 SH3TC2Q8TF17 1288 aa20.52■□□□□ 0.88
GPN3-202ENST00000537466 ARMC5Q96C12 935 aa20.52■□□□□ 0.88
GPN3-202ENST00000537466 BTBD7Q9P203 1132 aa20.52■□□□□ 0.88
GPN3-202ENST00000537466 RABGAP1Q9Y3P9 1069 aa20.52■□□□□ 0.88
GPN3-202ENST00000537466 NMT2O60551 498 aa20.51■□□□□ 0.87
GPN3-202ENST00000537466 TTLL1O95922 423 aa20.51■□□□□ 0.87
GPN3-202ENST00000537466 FLT3LGP49771 235 aa20.51■□□□□ 0.87
GPN3-202ENST00000537466 RRP12Q5JTH9 1297 aaKnown RBP20.51■□□□□ 0.87
GPN3-202ENST00000537466 LRRC47Q8N1G4 583 aaKnown RBP20.51■□□□□ 0.87
GPN3-202ENST00000537466 NKX2-3Q8TAU0 364 aa20.51■□□□□ 0.87
GPN3-202ENST00000537466 RAET1EQ8TD07 263 aa20.51■□□□□ 0.87
GPN3-202ENST00000537466 MKL1Q969V6 931 aa20.51■□□□□ 0.87
GPN3-202ENST00000537466 PORCNQ9H237 461 aa20.51■□□□□ 0.87
GPN3-202ENST00000537466 IL17RBQ9NRM6 502 aa20.51■□□□□ 0.87
GPN3-202ENST00000537466 TOMM22Q9NS69 142 aa20.51■□□□□ 0.87
GPN3-202ENST00000537466 RAD50Q92878 1312 aa20.51■□□□□ 0.87
GPN3-202ENST00000537466 F5H6K3 240 aa20.5■□□□□ 0.87
GPN3-202ENST00000537466 FLOT1O75955 427 aa20.5■□□□□ 0.87
GPN3-202ENST00000537466 NDUFB10O96000 172 aa20.5■□□□□ 0.87
GPN3-202ENST00000537466 CENPBP07199 599 aaPredicted RBP20.5■□□□□ 0.87
GPN3-202ENST00000537466 KLRC3Q07444 240 aa20.5■□□□□ 0.87
GPN3-202ENST00000537466 FAM83BQ5T0W9 1011 aa20.5■□□□□ 0.87
GPN3-202ENST00000537466 AKNAD1Q5T1N1 836 aa20.5■□□□□ 0.87
GPN3-202ENST00000537466 COA7Q96BR5 231 aa20.5■□□□□ 0.87
GPN3-202ENST00000537466 NUP88Q99567 741 aaPredicted RBP20.5■□□□□ 0.87
GPN3-202ENST00000537466 FBXO28Q9NVF7 368 aa20.5■□□□□ 0.87
GPN3-202ENST00000537466 ZNF213O14771 459 aa20.5■□□□□ 0.87
GPN3-202ENST00000537466 DSG3P32926 999 aa20.5■□□□□ 0.87
GPN3-202ENST00000537466 SAMD1Q6SPF0 538 aaPredicted RBP20.5■□□□□ 0.87
GPN3-202ENST00000537466 STAG1Q8WVM7 1258 aa20.5■□□□□ 0.87
GPN3-202ENST00000537466 RUFY2Q8WXA3 655 aa20.5■□□□□ 0.87
GPN3-202ENST00000537466 ATG4CQ96DT6 458 aa20.5■□□□□ 0.87
GPN3-202ENST00000537466 ZNF333Q96JL9 665 aa20.5■□□□□ 0.87
GPN3-202ENST00000537466 HOXC10Q9NYD6 342 aa20.5■□□□□ 0.87
GPN3-202ENST00000537466 NEDD4P46934 1319 aa20.49■□□□□ 0.87
GPN3-202ENST00000537466 MFSD6Q6ZSS7 791 aa20.49■□□□□ 0.87
GPN3-202ENST00000537466 GJD2Q9UKL4 321 aa20.49■□□□□ 0.87
GPN3-202ENST00000537466 BRCA2P51587 3418 aa20.48■□□□□ 0.87
GPN3-202ENST00000537466 ZNFX1Q9P2E3 1918 aaKnown RBP20.48■□□□□ 0.87
GPN3-202ENST00000537466 SGSM2O43147 1006 aa20.48■□□□□ 0.87
GPN3-202ENST00000537466 GRK4P32298 578 aa20.48■□□□□ 0.87
GPN3-202ENST00000537466 PTH1RQ03431 593 aa20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms