RNA–Protein interactions for RNA: ENST00000536996.5

SPPL3-204, Transcript of signal peptide peptidase like 3, humanhuman

TSL 5

Gene SPPL3, Length 763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPPL3-204ENST00000536996 FAM43AQ8N2R8 423 aa17.02■□□□□ 0.32
SPPL3-204ENST00000536996 USP26Q9BXU7 913 aa17.02■□□□□ 0.32
SPPL3-204ENST00000536996 VCPKMTQ9H867 229 aa17.02■□□□□ 0.32
SPPL3-204ENST00000536996 RNF186Q9NXI6 227 aa17.02■□□□□ 0.32
SPPL3-204ENST00000536996 ATP2B2Q01814 1243 aa17.01■□□□□ 0.31
SPPL3-204ENST00000536996 KRT32Q14532 448 aa17.01■□□□□ 0.31
SPPL3-204ENST00000536996 C8orf34Q49A92 452 aa17.01■□□□□ 0.31
SPPL3-204ENST00000536996 NKX2-3Q8TAU0 364 aa17.01■□□□□ 0.31
SPPL3-204ENST00000536996 GOPCQ9HD26 462 aa17.01■□□□□ 0.31
SPPL3-204ENST00000536996 CLIP2Q9UDT6 1046 aa17.01■□□□□ 0.31
SPPL3-204ENST00000536996 PDHXO00330 501 aa17■□□□□ 0.31
SPPL3-204ENST00000536996 NMT2O60551 498 aa17■□□□□ 0.31
SPPL3-204ENST00000536996 VCAM1P19320 739 aa17■□□□□ 0.31
SPPL3-204ENST00000536996 DGKZQ13574 1117 aa17■□□□□ 0.31
SPPL3-204ENST00000536996 TAF1CQ15572 869 aaPredicted RBP17■□□□□ 0.31
SPPL3-204ENST00000536996 ZYXQ15942 572 aaKnown RBP17■□□□□ 0.31
SPPL3-204ENST00000536996 TREML2Q5T2D2 321 aa17■□□□□ 0.31
SPPL3-204ENST00000536996 DGKHQ86XP1 1220 aa17■□□□□ 0.31
SPPL3-204ENST00000536996 MB21D2Q8IYB1 491 aaPredicted RBP17■□□□□ 0.31
SPPL3-204ENST00000536996 DOCK3Q8IZD9 2030 aa17■□□□□ 0.31
SPPL3-204ENST00000536996 GMCL1P1Q8NEA9 526 aa17■□□□□ 0.31
SPPL3-204ENST00000536996 ZSCAN10Q96SZ4 725 aaPredicted RBP17■□□□□ 0.31
SPPL3-204ENST00000536996 MTA3Q9BTC8 594 aa17■□□□□ 0.31
SPPL3-204ENST00000536996 PNMA3Q9UL41 463 aa17■□□□□ 0.31
SPPL3-204ENST00000536996 STX8Q9UNK0 236 aa17■□□□□ 0.31
SPPL3-204ENST00000536996 ZNFX1Q9P2E3 1918 aaKnown RBP17■□□□□ 0.31
SPPL3-204ENST00000536996 WDR46O15213 610 aaKnown RBP16.99■□□□□ 0.31
SPPL3-204ENST00000536996 TRPA1O75762 1119 aa16.99■□□□□ 0.31
SPPL3-204ENST00000536996 HSPA1AP0DMV8 641 aaKnown RBP16.99■□□□□ 0.31
SPPL3-204ENST00000536996 HSPA1BP0DMV9 641 aaKnown RBP16.99■□□□□ 0.31
SPPL3-204ENST00000536996 TOP1P11387 765 aaKnown RBP16.99■□□□□ 0.31
SPPL3-204ENST00000536996 MCCP23508 829 aa16.99■□□□□ 0.31
SPPL3-204ENST00000536996 NOM1Q5C9Z4 860 aaKnown RBP16.99■□□□□ 0.31
SPPL3-204ENST00000536996 RCSD1Q6JBY9 416 aa16.99■□□□□ 0.31
SPPL3-204ENST00000536996 ANKS1AQ92625 1134 aa16.99■□□□□ 0.31
SPPL3-204ENST00000536996 UBAC1Q9BSL1 405 aa16.99■□□□□ 0.31
SPPL3-204ENST00000536996 ZFYVE28Q9HCC9 887 aa16.99■□□□□ 0.31
SPPL3-204ENST00000536996 USP17L15C9J2P7 530 aa16.98■□□□□ 0.31
SPPL3-204ENST00000536996 USP17L13C9JLJ4 530 aa16.98■□□□□ 0.31
SPPL3-204ENST00000536996 USP17L11C9JVI0 530 aa16.98■□□□□ 0.31
SPPL3-204ENST00000536996 USP17L18D6R9N7 530 aa16.98■□□□□ 0.31
SPPL3-204ENST00000536996 USP17L22D6RA61 530 aa16.98■□□□□ 0.31
SPPL3-204ENST00000536996 USP17L17D6RBQ6 530 aa16.98■□□□□ 0.31
SPPL3-204ENST00000536996 USP17L19D6RCP7 530 aa16.98■□□□□ 0.31
SPPL3-204ENST00000536996 USP17L20D6RJB6 530 aa16.98■□□□□ 0.31
SPPL3-204ENST00000536996 F5H6K3 240 aa16.98■□□□□ 0.31
SPPL3-204ENST00000536996 KLRC3Q07444 240 aa16.98■□□□□ 0.31
SPPL3-204ENST00000536996 USP17L24Q0WX57 530 aa16.98■□□□□ 0.31
SPPL3-204ENST00000536996 CYB5R4Q7L1T6 521 aa16.98■□□□□ 0.31
SPPL3-204ENST00000536996 RASEFQ8IZ41 740 aa16.98■□□□□ 0.31
SPPL3-204ENST00000536996 LRRC47Q8N1G4 583 aaKnown RBP16.98■□□□□ 0.31
SPPL3-204ENST00000536996 PARK7Q99497 189 aaKnown RBP16.98■□□□□ 0.31
SPPL3-204ENST00000536996 TNKSO95271 1327 aa16.97■□□□□ 0.31
SPPL3-204ENST00000536996 WDR19Q8NEZ3 1342 aa16.97■□□□□ 0.31
SPPL3-204ENST00000536996 OSBPP22059 807 aa16.97■□□□□ 0.31
SPPL3-204ENST00000536996 MCM5P33992 734 aa16.97■□□□□ 0.31
SPPL3-204ENST00000536996 CRHR2Q13324 411 aa16.97■□□□□ 0.31
SPPL3-204ENST00000536996 SART3Q15020 963 aaKnown RBP16.97■□□□□ 0.31
SPPL3-204ENST00000536996 KIAA1755Q5JYT7 1200 aa16.97■□□□□ 0.31
SPPL3-204ENST00000536996 ENAHQ8N8S7 591 aaPredicted RBP16.97■□□□□ 0.31
SPPL3-204ENST00000536996 GMCL1Q96IK5 515 aa16.97■□□□□ 0.31
SPPL3-204ENST00000536996 NEK1Q96PY6 1258 aa16.97■□□□□ 0.31
SPPL3-204ENST00000536996 TMEM47Q9BQJ4 181 aa16.97■□□□□ 0.31
SPPL3-204ENST00000536996 ZKSCAN3Q9BRR0 538 aa16.97■□□□□ 0.31
SPPL3-204ENST00000536996 ASCC2Q9H1I8 757 aaPredicted RBP16.97■□□□□ 0.31
SPPL3-204ENST00000536996 SNX14Q9Y5W7 946 aa16.97■□□□□ 0.31
SPPL3-204ENST00000536996 ZSWIM8A7E2V4 1837 aa16.97■□□□□ 0.31
SPPL3-204ENST00000536996 ADGRA2Q96PE1 1338 aa16.96■□□□□ 0.31
SPPL3-204ENST00000536996 PLXNB2O15031 1838 aa16.96■□□□□ 0.31
SPPL3-204ENST00000536996 ERICH2A1L162 156 aa16.96■□□□□ 0.31
SPPL3-204ENST00000536996 TLR2O60603 784 aa16.96■□□□□ 0.31
SPPL3-204ENST00000536996 NDUFB10O96000 172 aa16.96■□□□□ 0.31
SPPL3-204ENST00000536996 HMGB1P09429 215 aaKnown RBP16.96■□□□□ 0.31
SPPL3-204ENST00000536996 ANTXR2P58335 489 aa16.96■□□□□ 0.31
SPPL3-204ENST00000536996 IRX3P78415 501 aaPredicted RBP16.96■□□□□ 0.31
SPPL3-204ENST00000536996 SEC23AQ15436 765 aa16.96■□□□□ 0.31
SPPL3-204ENST00000536996 CATSPERGQ6ZRH7 1159 aa16.96■□□□□ 0.31
SPPL3-204ENST00000536996 TMEM87BQ96K49 555 aa16.96■□□□□ 0.31
SPPL3-204ENST00000536996 RPAP3Q9H6T3 665 aaPredicted RBP16.96■□□□□ 0.31
SPPL3-204ENST00000536996 MYPNQ86TC9 1320 aa16.96■□□□□ 0.3
SPPL3-204ENST00000536996 FOXN1O15353 648 aa16.95■□□□□ 0.3
SPPL3-204ENST00000536996 TBC1D8O95759 1140 aa16.95■□□□□ 0.3
SPPL3-204ENST00000536996 ADCK5Q3MIX3 580 aa16.95■□□□□ 0.3
SPPL3-204ENST00000536996 LBX2Q6XYB7 198 aa16.95■□□□□ 0.3
SPPL3-204ENST00000536996 SPICE1Q8N0Z3 855 aa16.95■□□□□ 0.3
SPPL3-204ENST00000536996 SMCR8Q8TEV9 937 aaPredicted RBP16.95■□□□□ 0.3
SPPL3-204ENST00000536996 GTF3C2Q8WUA4 911 aaPredicted RBP16.95■□□□□ 0.3
SPPL3-204ENST00000536996 SMCHD1A6NHR9 2005 aa16.95■□□□□ 0.3
SPPL3-204ENST00000536996 IFIT3O14879 490 aaKnown RBP16.94■□□□□ 0.3
SPPL3-204ENST00000536996 PRC1O43663 620 aa16.94■□□□□ 0.3
SPPL3-204ENST00000536996 SEC24BO95487 1268 aa16.94■□□□□ 0.3
SPPL3-204ENST00000536996 CYP2C8P10632 490 aa16.94■□□□□ 0.3
SPPL3-204ENST00000536996 PSMA5P28066 241 aa16.94■□□□□ 0.3
SPPL3-204ENST00000536996 GCLCP48506 637 aaPredicted RBP16.94■□□□□ 0.3
SPPL3-204ENST00000536996 CTCFP49711 727 aaPredicted RBP16.94■□□□□ 0.3
SPPL3-204ENST00000536996 ANAPC15P60006 121 aa16.94■□□□□ 0.3
SPPL3-204ENST00000536996 COG2Q14746 738 aa16.94■□□□□ 0.3
SPPL3-204ENST00000536996 IFIT1BQ5T764 474 aaKnown RBP16.94■□□□□ 0.3
SPPL3-204ENST00000536996 SLFN13Q68D06 897 aa16.94■□□□□ 0.3
SPPL3-204ENST00000536996 DHX32Q7L7V1 743 aaKnown RBP16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms