RNA–Protein interactions for RNA: ENST00000536586.5

CD9-206, Transcript of CD9 molecule, humanhuman

TSL 3

Gene CD9, Length 739 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-206ENST00000536586 MKNK2Q9HBH9 465 aa16.32■□□□□ 0.2
CD9-206ENST00000536586 ZNF287Q9HBT7 754 aa16.32■□□□□ 0.2
CD9-206ENST00000536586 TXNRD2Q9NNW7 524 aa16.32■□□□□ 0.2
CD9-206ENST00000536586 INCENPQ9NQS7 918 aa16.32■□□□□ 0.2
CD9-206ENST00000536586 MTMR4Q9NYA4 1195 aa16.32■□□□□ 0.2
CD9-206ENST00000536586 ADAMTS5Q9UNA0 930 aa16.32■□□□□ 0.2
CD9-206ENST00000536586 HPS5Q9UPZ3 1129 aa16.32■□□□□ 0.2
CD9-206ENST00000536586 TRIM17Q9Y577 477 aa16.32■□□□□ 0.2
CD9-206ENST00000536586 PRDM1O75626 825 aa16.31■□□□□ 0.2
CD9-206ENST00000536586 CNMDO75829 334 aa16.31■□□□□ 0.2
CD9-206ENST00000536586 PRMT2P55345 433 aa16.31■□□□□ 0.2
CD9-206ENST00000536586 NKX2-3Q8TAU0 364 aa16.31■□□□□ 0.2
CD9-206ENST00000536586 ARHGEF10LQ9HCE6 1279 aa16.31■□□□□ 0.2
CD9-206ENST00000536586 DIAPH3Q9NSV4 1193 aa16.31■□□□□ 0.2
CD9-206ENST00000536586 ZNF236Q9UL36 1845 aa16.31■□□□□ 0.2
CD9-206ENST00000536586 PCP11498 1178 aaKnown RBP16.3■□□□□ 0.2
CD9-206ENST00000536586 PSMC4P43686 418 aa16.3■□□□□ 0.2
CD9-206ENST00000536586 ARHGEF6Q15052 776 aa16.3■□□□□ 0.2
CD9-206ENST00000536586 Q3C1V9 767 aa16.3■□□□□ 0.2
CD9-206ENST00000536586 BMP2KLQ5H9B9 411 aa16.3■□□□□ 0.2
CD9-206ENST00000536586 SKAP1Q86WV1 359 aa16.3■□□□□ 0.2
CD9-206ENST00000536586 ZNF444Q8N0Y2 327 aaPredicted RBP16.3■□□□□ 0.2
CD9-206ENST00000536586 ANKRD13CQ8N6S4 541 aa16.3■□□□□ 0.2
CD9-206ENST00000536586 GTF3C2Q8WUA4 911 aaPredicted RBP16.3■□□□□ 0.2
CD9-206ENST00000536586 CEP95Q96GE4 821 aa16.3■□□□□ 0.2
CD9-206ENST00000536586 IL17RBQ9NRM6 502 aa16.3■□□□□ 0.2
CD9-206ENST00000536586 SRRDQ9UH36 339 aa16.3■□□□□ 0.2
CD9-206ENST00000536586 PLXNA1Q9UIW2 1896 aa16.29■□□□□ 0.2
CD9-206ENST00000536586 MYPNQ86TC9 1320 aa16.29■□□□□ 0.2
CD9-206ENST00000536586 SPDYE16A6NNV3 312 aaPredicted RBP16.29■□□□□ 0.2
CD9-206ENST00000536586 WDR46O15213 610 aaKnown RBP16.29■□□□□ 0.2
CD9-206ENST00000536586 SGSM2O43147 1006 aa16.29■□□□□ 0.2
CD9-206ENST00000536586 SLC3A2P08195 630 aaKnown RBP16.29■□□□□ 0.2
CD9-206ENST00000536586 ZYXQ15942 572 aaKnown RBP16.29■□□□□ 0.2
CD9-206ENST00000536586 SMCR8Q8TEV9 937 aaPredicted RBP16.29■□□□□ 0.2
CD9-206ENST00000536586 STAG1Q8WVM7 1258 aa16.29■□□□□ 0.2
CD9-206ENST00000536586 ARMC5Q96C12 935 aa16.29■□□□□ 0.2
CD9-206ENST00000536586 FEZ1Q99689 392 aa16.29■□□□□ 0.2
CD9-206ENST00000536586 RPAP3Q9H6T3 665 aaPredicted RBP16.29■□□□□ 0.2
CD9-206ENST00000536586 SH2D4AQ9H788 454 aa16.29■□□□□ 0.2
CD9-206ENST00000536586 TCP11L1Q9NUJ3 509 aa16.29■□□□□ 0.2
CD9-206ENST00000536586 GJD2Q9UKL4 321 aa16.29■□□□□ 0.2
CD9-206ENST00000536586 RABGAP1Q9Y3P9 1069 aa16.29■□□□□ 0.2
CD9-206ENST00000536586 NT5C2P49902 561 aa16.28■□□□□ 0.2
CD9-206ENST00000536586 IRX3P78415 501 aaPredicted RBP16.28■□□□□ 0.2
CD9-206ENST00000536586 TFAP4Q01664 338 aa16.28■□□□□ 0.2
CD9-206ENST00000536586 COG2Q14746 738 aa16.28■□□□□ 0.2
CD9-206ENST00000536586 KIF22Q14807 665 aa16.28■□□□□ 0.2
CD9-206ENST00000536586 AKNAD1Q5T1N1 836 aa16.28■□□□□ 0.2
CD9-206ENST00000536586 TBC1D10CQ8IV04 446 aa16.28■□□□□ 0.2
CD9-206ENST00000536586 STK11IPQ8N1F8 1099 aa16.28■□□□□ 0.2
CD9-206ENST00000536586 PEX10O60683 326 aa16.27■□□□□ 0.2
CD9-206ENST00000536586 DSG3P32926 999 aa16.27■□□□□ 0.2
CD9-206ENST00000536586 RGS19P49795 217 aa16.27■□□□□ 0.2
CD9-206ENST00000536586 ERVK-9P63128 1117 aa16.27■□□□□ 0.2
CD9-206ENST00000536586 ERVK-24P63145 666 aa16.27■□□□□ 0.2
CD9-206ENST00000536586 IRF5Q13568 498 aa16.27■□□□□ 0.2
CD9-206ENST00000536586 FAM47AQ5JRC9 791 aa16.27■□□□□ 0.2
CD9-206ENST00000536586 GMCL1P1Q8NEA9 526 aa16.27■□□□□ 0.2
CD9-206ENST00000536586 CCDC136Q96JN2 1154 aa16.27■□□□□ 0.2
CD9-206ENST00000536586 HOXC10Q9NYD6 342 aa16.27■□□□□ 0.2
CD9-206ENST00000536586 BTBD7Q9P203 1132 aa16.27■□□□□ 0.2
CD9-206ENST00000536586 PTCH2Q9Y6C5 1203 aa16.27■□□□□ 0.2
CD9-206ENST00000536586 TNRC18O15417 2968 aaPredicted RBP16.27■□□□□ 0.19
CD9-206ENST00000536586 MYH6P13533 1939 aa16.26■□□□□ 0.19
CD9-206ENST00000536586 F5H6K3 240 aa16.26■□□□□ 0.19
CD9-206ENST00000536586 TTLL1O95922 423 aa16.26■□□□□ 0.19
CD9-206ENST00000536586 FCGRTP55899 365 aa16.26■□□□□ 0.19
CD9-206ENST00000536586 PTH1RQ03431 593 aa16.26■□□□□ 0.19
CD9-206ENST00000536586 KLRC3Q07444 240 aa16.26■□□□□ 0.19
CD9-206ENST00000536586 RCSD1Q6JBY9 416 aa16.26■□□□□ 0.19
CD9-206ENST00000536586 GPRC5AQ8NFJ5 357 aa16.26■□□□□ 0.19
CD9-206ENST00000536586 USP6NLQ92738 828 aa16.26■□□□□ 0.19
CD9-206ENST00000536586 MAP4K1Q92918 833 aa16.26■□□□□ 0.19
CD9-206ENST00000536586 CLIP2Q9UDT6 1046 aa16.26■□□□□ 0.19
CD9-206ENST00000536586 GABRQQ9UN88 632 aa16.26■□□□□ 0.19
CD9-206ENST00000536586 NDUFB10O96000 172 aa16.25■□□□□ 0.19
CD9-206ENST00000536586 CENPBP07199 599 aaPredicted RBP16.25■□□□□ 0.19
CD9-206ENST00000536586 TSPY3P0CV98 308 aa16.25■□□□□ 0.19
CD9-206ENST00000536586 TSPY8P0CW00 308 aa16.25■□□□□ 0.19
CD9-206ENST00000536586 HAND2P61296 217 aa16.25■□□□□ 0.19
CD9-206ENST00000536586 REPS2Q8NFH8 660 aa16.25■□□□□ 0.19
CD9-206ENST00000536586 RUFY2Q8WXA3 655 aa16.25■□□□□ 0.19
CD9-206ENST00000536586 GOPCQ9HD26 462 aa16.25■□□□□ 0.19
CD9-206ENST00000536586 ZNF213O14771 459 aa16.24■□□□□ 0.19
CD9-206ENST00000536586 NMT2O60551 498 aa16.24■□□□□ 0.19
CD9-206ENST00000536586 IGHA2P01877 340 aa16.24■□□□□ 0.19
CD9-206ENST00000536586 HOXD10P28358 340 aa16.24■□□□□ 0.19
CD9-206ENST00000536586 PRKCZQ05513 592 aa16.24■□□□□ 0.19
CD9-206ENST00000536586 PPP4R3BQ5MIZ7 849 aa16.24■□□□□ 0.19
CD9-206ENST00000536586 SPICE1Q8N0Z3 855 aa16.24■□□□□ 0.19
CD9-206ENST00000536586 ANKS1AQ92625 1134 aa16.24■□□□□ 0.19
CD9-206ENST00000536586 ZNF333Q96JL9 665 aa16.24■□□□□ 0.19
CD9-206ENST00000536586 PORCNQ9H237 461 aa16.24■□□□□ 0.19
CD9-206ENST00000536586 PPP4R2Q9NY27 417 aa16.24■□□□□ 0.19
CD9-206ENST00000536586 CTNNA3Q9UI47 895 aa16.24■□□□□ 0.19
CD9-206ENST00000536586 MKI67P46013 3256 aaKnown RBP16.24■□□□□ 0.19
CD9-206ENST00000536586 NEDD4P46934 1319 aa16.23■□□□□ 0.19
CD9-206ENST00000536586 TSPY2A6NKD2 308 aa16.23■□□□□ 0.19
CD9-206ENST00000536586 PLA2G6O60733 806 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms