RNA–Protein interactions for RNA: ENST00000536145.3

CPSF7-215, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 546 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-215ENST00000536145 SSRP1Q08945 709 aaKnown RBP7.81□□□□□ -1.16
CPSF7-215ENST00000536145 MEA1Q16626 185 aa7.81□□□□□ -1.16
CPSF7-215ENST00000536145 DIS3L2Q8IYB7 885 aaKnown RBP7.81□□□□□ -1.16
CPSF7-215ENST00000536145 ZNF507Q8TCN5 953 aa7.81□□□□□ -1.16
CPSF7-215ENST00000536145 ZNF512BQ96KM6 892 aaPredicted RBP7.81□□□□□ -1.16
CPSF7-215ENST00000536145 DNAJC7Q99615 494 aa7.81□□□□□ -1.16
CPSF7-215ENST00000536145 PUS3Q9BZE2 481 aaKnown RBP7.81□□□□□ -1.16
CPSF7-215ENST00000536145 GGA2Q9UJY4 613 aa7.81□□□□□ -1.16
CPSF7-215ENST00000536145 XDHP47989 1333 aa7.8□□□□□ -1.16
CPSF7-215ENST00000536145 AKAP11Q9UKA4 1901 aa7.8□□□□□ -1.16
CPSF7-215ENST00000536145 ALS2Q96Q42 1657 aa7.8□□□□□ -1.16
CPSF7-215ENST00000536145 RIC1Q4ADV7 1423 aa7.8□□□□□ -1.16
CPSF7-215ENST00000536145 A0A1W2PQC6 194 aa7.8□□□□□ -1.16
CPSF7-215ENST00000536145 RASSF10A6NK89 507 aa7.8□□□□□ -1.16
CPSF7-215ENST00000536145 SRRM3A6NNA2 597 aaPredicted RBP7.8□□□□□ -1.16
CPSF7-215ENST00000536145 A6NNZ2 444 aa7.8□□□□□ -1.16
CPSF7-215ENST00000536145 KIF1CO43896 1103 aaKnown RBP7.8□□□□□ -1.16
CPSF7-215ENST00000536145 SNRPA1P09661 255 aaKnown RBP7.8□□□□□ -1.16
CPSF7-215ENST00000536145 CCDC172P0C7W6 258 aa7.8□□□□□ -1.16
CPSF7-215ENST00000536145 GPTP24298 496 aa7.8□□□□□ -1.16
CPSF7-215ENST00000536145 INPP5BP32019 993 aa7.8□□□□□ -1.16
CPSF7-215ENST00000536145 ATP6V1AP38606 617 aa7.8□□□□□ -1.16
CPSF7-215ENST00000536145 ZAP70P43403 619 aa7.8□□□□□ -1.16
CPSF7-215ENST00000536145 HSPA2P54652 639 aa7.8□□□□□ -1.16
CPSF7-215ENST00000536145 STX17P56962 302 aa7.8□□□□□ -1.16
CPSF7-215ENST00000536145 GNGT1P63211 74 aa7.8□□□□□ -1.16
CPSF7-215ENST00000536145 TRIM29Q14134 588 aa7.8□□□□□ -1.16
CPSF7-215ENST00000536145 TUBB8Q3ZCM7 444 aa7.8□□□□□ -1.16
CPSF7-215ENST00000536145 PREPLQ4J6C6 727 aaPredicted RBP7.8□□□□□ -1.16
CPSF7-215ENST00000536145 TTMPQ5BVD1 217 aa7.8□□□□□ -1.16
CPSF7-215ENST00000536145 FBXW10Q5XX13 1052 aa7.8□□□□□ -1.16
CPSF7-215ENST00000536145 WDR59Q6PJI9 974 aa7.8□□□□□ -1.16
CPSF7-215ENST00000536145 YTHDF3Q7Z739 585 aaKnown RBP7.8□□□□□ -1.16
CPSF7-215ENST00000536145 IRF2BP1Q8IU81 584 aa7.8□□□□□ -1.16
CPSF7-215ENST00000536145 TSEN2Q8NCE0 465 aaKnown RBP7.8□□□□□ -1.16
CPSF7-215ENST00000536145 C1orf131Q8NDD1 294 aaKnown RBP7.8□□□□□ -1.16
CPSF7-215ENST00000536145 WASF1Q92558 559 aa7.8□□□□□ -1.16
CPSF7-215ENST00000536145 CAVIN3Q969G5 261 aa7.8□□□□□ -1.16
CPSF7-215ENST00000536145 TACO1Q9BSH4 297 aaKnown RBP7.8□□□□□ -1.16
CPSF7-215ENST00000536145 MTA3Q9BTC8 594 aa7.8□□□□□ -1.16
CPSF7-215ENST00000536145 CAPS2Q9BXY5 557 aa7.8□□□□□ -1.16
CPSF7-215ENST00000536145 HDAC6Q9UBN7 1215 aa7.8□□□□□ -1.16
CPSF7-215ENST00000536145 RWDD2AQ9UIY3 292 aa7.8□□□□□ -1.16
CPSF7-215ENST00000536145 FAM184BQ9ULE4 1060 aa7.8□□□□□ -1.16
CPSF7-215ENST00000536145 CEP83Q9Y592 693 aa7.8□□□□□ -1.16
CPSF7-215ENST00000536145 SAR1BQ9Y6B6 198 aa7.8□□□□□ -1.16
CPSF7-215ENST00000536145 TRPM3Q9HCF6 1732 aaPredicted RBP7.8□□□□□ -1.16
CPSF7-215ENST00000536145 TCRBV5S4A2TA0A5A2 114 aa7.79□□□□□ -1.16
CPSF7-215ENST00000536145 GOLGA6CA6NDK9 693 aa7.79□□□□□ -1.16
CPSF7-215ENST00000536145 RCCD1A6NED2 376 aa7.79□□□□□ -1.16
CPSF7-215ENST00000536145 NBPF26B4DH59 902 aa7.79□□□□□ -1.16
CPSF7-215ENST00000536145 B4E1Z4 1266 aa7.79□□□□□ -1.16
CPSF7-215ENST00000536145 SRGAP2O75044 1071 aa7.79□□□□□ -1.16
CPSF7-215ENST00000536145 GOLGA6DP0CG33 693 aa7.79□□□□□ -1.16
CPSF7-215ENST00000536145 PHKG2P15735 406 aa7.79□□□□□ -1.16
CPSF7-215ENST00000536145 PRLRP16471 622 aa7.79□□□□□ -1.16
CPSF7-215ENST00000536145 KCNA6P17658 529 aa7.79□□□□□ -1.16
CPSF7-215ENST00000536145 RXRAP19793 462 aa7.79□□□□□ -1.16
CPSF7-215ENST00000536145 KRT9P35527 623 aa7.79□□□□□ -1.16
CPSF7-215ENST00000536145 USP8P40818 1118 aa7.79□□□□□ -1.16
CPSF7-215ENST00000536145 RCAN1P53805 252 aa7.79□□□□□ -1.16
CPSF7-215ENST00000536145 AKAP17AQ02040 695 aaKnown RBP7.79□□□□□ -1.16
CPSF7-215ENST00000536145 NNTQ13423 1086 aa7.79□□□□□ -1.16
CPSF7-215ENST00000536145 TTF1Q15361 905 aaPredicted RBP7.79□□□□□ -1.16
CPSF7-215ENST00000536145 UBE3CQ15386 1083 aa7.79□□□□□ -1.16
CPSF7-215ENST00000536145 TCP11X2Q5H9J9 407 aa7.79□□□□□ -1.16
CPSF7-215ENST00000536145 WLSQ5T9L3 541 aa7.79□□□□□ -1.16
CPSF7-215ENST00000536145 ALS2CLQ60I27 953 aa7.79□□□□□ -1.16
CPSF7-215ENST00000536145 NBPF10Q6P3W6 841 aaKnown RBP7.79□□□□□ -1.16
CPSF7-215ENST00000536145 PDXDC2PQ6P474 469 aa7.79□□□□□ -1.16
CPSF7-215ENST00000536145 C6orf89Q6UWU4 347 aa7.79□□□□□ -1.16
CPSF7-215ENST00000536145 SPATS2Q86XZ4 545 aaKnown RBP7.79□□□□□ -1.16
CPSF7-215ENST00000536145 CREG2Q8IUH2 290 aa7.79□□□□□ -1.16
CPSF7-215ENST00000536145 CD302Q8IX05 232 aa7.79□□□□□ -1.16
CPSF7-215ENST00000536145 GSPT2Q8IYD1 628 aaKnown RBP7.79□□□□□ -1.16
CPSF7-215ENST00000536145 NBPF15Q8N660 670 aa7.79□□□□□ -1.16
CPSF7-215ENST00000536145 MB21D1Q8N884 522 aa7.79□□□□□ -1.16
CPSF7-215ENST00000536145 ANKRD20A12PQ8NF67 263 aa7.79□□□□□ -1.16
CPSF7-215ENST00000536145 OR8K1Q8NGG5 319 aa7.79□□□□□ -1.16
CPSF7-215ENST00000536145 OXER1Q8TDS5 423 aa7.79□□□□□ -1.16
CPSF7-215ENST00000536145 TNFRSF25Q93038 417 aa7.79□□□□□ -1.16
CPSF7-215ENST00000536145 ARL8AQ96BM9 186 aa7.79□□□□□ -1.16
CPSF7-215ENST00000536145 ZNF594Q96JF6 807 aaPredicted RBP7.79□□□□□ -1.16
CPSF7-215ENST00000536145 SLC26A6Q9BXS9 759 aa7.79□□□□□ -1.16
CPSF7-215ENST00000536145 TTYH3Q9C0H2 523 aa7.79□□□□□ -1.16
CPSF7-215ENST00000536145 GOLGA6AQ9NYA3 693 aa7.79□□□□□ -1.16
CPSF7-215ENST00000536145 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.79□□□□□ -1.164e-9■■■□□ 15.2
CPSF7-215ENST00000536145 TAB2Q9NYJ8 693 aa7.79□□□□□ -1.16
CPSF7-215ENST00000536145 MCM8Q9UJA3 840 aa7.79□□□□□ -1.16
CPSF7-215ENST00000536145 CAPN11Q9UMQ6 739 aa7.79□□□□□ -1.16
CPSF7-215ENST00000536145 KCNJ14Q9UNX9 436 aa7.79□□□□□ -1.16
CPSF7-215ENST00000536145 CEP131Q9UPN4 1083 aa7.79□□□□□ -1.16
CPSF7-215ENST00000536145 CTNND2Q9UQB3 1225 aa7.79□□□□□ -1.16
CPSF7-215ENST00000536145 CCDC9Q9Y3X0 531 aaKnown RBP7.79□□□□□ -1.16
CPSF7-215ENST00000536145 TTC26A0AVF1 554 aa7.78□□□□□ -1.16
CPSF7-215ENST00000536145 GOLGA6BA6NDN3 693 aa7.78□□□□□ -1.16
CPSF7-215ENST00000536145 LGALS16A8MUM7 142 aa7.78□□□□□ -1.16
CPSF7-215ENST00000536145 KCNJ18B7U540 433 aa7.78□□□□□ -1.16
CPSF7-215ENST00000536145 N4BP3O15049 544 aa7.78□□□□□ -1.16
CPSF7-215ENST00000536145 MEFVO15553 781 aaPredicted RBP7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms