RNA–Protein interactions for RNA: ENST00000535906.1

VPS33B-202, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2 BASIC

Gene VPS33B, Length 2,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-202ENST00000535906 HSD3B7Q9H2F3 369 aa15.31■□□□□ 0.04
VPS33B-202ENST00000535906 BRMS1Q9HCU9 246 aa15.31■□□□□ 0.04
VPS33B-202ENST00000535906 SERTAD1Q9UHV2 236 aa15.31■□□□□ 0.04
VPS33B-202ENST00000535906 BMP6P22004 513 aa15.3■□□□□ 0.04
VPS33B-202ENST00000535906 ZNF444Q8N0Y2 327 aaPredicted RBP15.3■□□□□ 0.04
VPS33B-202ENST00000535906 ZNF710Q8N1W2 664 aa15.3■□□□□ 0.04
VPS33B-202ENST00000535906 TSC1Q92574 1164 aa15.3■□□□□ 0.04
VPS33B-202ENST00000535906 SMTNL1A8MU46 457 aa15.29■□□□□ 0.04
VPS33B-202ENST00000535906 IKBKBO14920 756 aa15.29■□□□□ 0.04
VPS33B-202ENST00000535906 RASA1P20936 1047 aa15.29■□□□□ 0.04
VPS33B-202ENST00000535906 NLRP5P59047 1200 aa15.29■□□□□ 0.04
VPS33B-202ENST00000535906 ZNF174Q15697 407 aa15.29■□□□□ 0.04
VPS33B-202ENST00000535906 FILIP1Q7Z7B0 1213 aa15.29■□□□□ 0.04
VPS33B-202ENST00000535906 C16orf45Q96MC5 204 aaPredicted RBP15.29■□□□□ 0.04
VPS33B-202ENST00000535906 MORC2Q9Y6X9 1032 aaPredicted RBP15.29■□□□□ 0.04
VPS33B-202ENST00000535906 PRR29P0C7W0 189 aa15.29■□□□□ 0.04
VPS33B-202ENST00000535906 LMOD1P29536 600 aaPredicted RBP15.29■□□□□ 0.04
VPS33B-202ENST00000535906 NT5C2P49902 561 aa15.29■□□□□ 0.04
VPS33B-202ENST00000535906 RHBDL3P58872 404 aa15.29■□□□□ 0.04
VPS33B-202ENST00000535906 POSTNQ15063 836 aa15.29■□□□□ 0.04
VPS33B-202ENST00000535906 TEX11Q8IYF3 940 aa15.29■□□□□ 0.04
VPS33B-202ENST00000535906 GRAMD1CQ8IYS0 662 aa15.29■□□□□ 0.04
VPS33B-202ENST00000535906 EPSTI1Q96J88 318 aa15.29■□□□□ 0.04
VPS33B-202ENST00000535906 XPO4Q9C0E2 1151 aaKnown RBP15.29■□□□□ 0.04
VPS33B-202ENST00000535906 TCP11L1Q9NUJ3 509 aa15.29■□□□□ 0.04
VPS33B-202ENST00000535906 IFNKQ9P0W0 207 aa15.29■□□□□ 0.04
VPS33B-202ENST00000535906 MAD2L2Q9UI95 211 aa15.29■□□□□ 0.04
VPS33B-202ENST00000535906 LTBP1Q14766 1721 aa15.29■□□□□ 0.04
VPS33B-202ENST00000535906 ACTN4O43707 911 aaKnown RBP15.28■□□□□ 0.04
VPS33B-202ENST00000535906 FAM163AQ96GL9 167 aaPredicted RBP15.28■□□□□ 0.04
VPS33B-202ENST00000535906 FLT1P17948 1338 aa15.28■□□□□ 0.04
VPS33B-202ENST00000535906 A0A087X0B3 334 aa15.28■□□□□ 0.04
VPS33B-202ENST00000535906 PPEF1O14829 653 aaPredicted RBP15.28■□□□□ 0.04
VPS33B-202ENST00000535906 CTIFO43310 598 aaKnown RBP15.28■□□□□ 0.04
VPS33B-202ENST00000535906 ATP1A3P13637 1013 aa15.28■□□□□ 0.04
VPS33B-202ENST00000535906 TNNT1P13805 278 aa15.28■□□□□ 0.04
VPS33B-202ENST00000535906 ZNF827Q17R98 1081 aa15.28■□□□□ 0.04
VPS33B-202ENST00000535906 SLC35G1Q2M3R5 365 aa15.28■□□□□ 0.04
VPS33B-202ENST00000535906 TTC38Q5R3I4 469 aa15.28■□□□□ 0.04
VPS33B-202ENST00000535906 PIK3AP1Q6ZUJ8 805 aa15.28■□□□□ 0.04
VPS33B-202ENST00000535906 CERS3Q8IU89 383 aa15.28■□□□□ 0.04
VPS33B-202ENST00000535906 SP8Q8IXZ3 490 aa15.28■□□□□ 0.04
VPS33B-202ENST00000535906 STX8Q9UNK0 236 aa15.28■□□□□ 0.04
VPS33B-202ENST00000535906 LRRC37AA6NMS7 1700 aa15.28■□□□□ 0.04
VPS33B-202ENST00000535906 RIMBP2O15034 1052 aa15.27■□□□□ 0.04
VPS33B-202ENST00000535906 SMC2O95347 1197 aa15.27■□□□□ 0.04
VPS33B-202ENST00000535906 CDK8P49336 464 aa15.27■□□□□ 0.04
VPS33B-202ENST00000535906 GSDMDP57764 484 aa15.27■□□□□ 0.04
VPS33B-202ENST00000535906 GTF2IP78347 998 aa15.27■□□□□ 0.04
VPS33B-202ENST00000535906 GRM4Q14833 912 aa15.27■□□□□ 0.04
VPS33B-202ENST00000535906 TPD52L1Q16890 204 aaPredicted RBP15.27■□□□□ 0.04
VPS33B-202ENST00000535906 NT5DC1Q5TFE4 455 aa15.27■□□□□ 0.04
VPS33B-202ENST00000535906 OLFM4Q6UX06 510 aa15.27■□□□□ 0.04
VPS33B-202ENST00000535906 TBC1D22AQ8WUA7 517 aa15.27■□□□□ 0.04
VPS33B-202ENST00000535906 GPKOWQ92917 476 aaPredicted RBP eCLIP15.27■□□□□ 0.04
VPS33B-202ENST00000535906 TMEM47Q9BQJ4 181 aa15.27■□□□□ 0.04
VPS33B-202ENST00000535906 IMPACTQ9P2X3 320 aa15.27■□□□□ 0.04
VPS33B-202ENST00000535906 HOOK1Q9UJC3 728 aaKnown RBP15.27■□□□□ 0.04
VPS33B-202ENST00000535906 MTMR7Q9Y216 660 aa15.27■□□□□ 0.04
VPS33B-202ENST00000535906 ANKRD31Q8N7Z5 1873 aa15.27■□□□□ 0.04
VPS33B-202ENST00000535906 GAKO14976 1311 aa15.27■□□□□ 0.03
VPS33B-202ENST00000535906 SKILP12757 684 aa15.27■□□□□ 0.03
VPS33B-202ENST00000535906 SARSP49591 514 aaKnown RBP15.27■□□□□ 0.03
VPS33B-202ENST00000535906 TPM4P67936 248 aa15.27■□□□□ 0.03
VPS33B-202ENST00000535906 CCZ1BP86790 482 aa15.27■□□□□ 0.03
VPS33B-202ENST00000535906 CCZ1P86791 482 aaPredicted RBP15.27■□□□□ 0.03
VPS33B-202ENST00000535906 MYL5Q02045 173 aa15.27■□□□□ 0.03
VPS33B-202ENST00000535906 PTGDRQ13258 359 aa15.27■□□□□ 0.03
VPS33B-202ENST00000535906 CCDC178Q5BJE1 867 aa15.27■□□□□ 0.03
VPS33B-202ENST00000535906 C16orf86Q6ZW13 317 aa15.27■□□□□ 0.03
VPS33B-202ENST00000535906 OSBPL5Q9H0X9 879 aaPredicted RBP15.27■□□□□ 0.03
VPS33B-202ENST00000535906 MAN1B1Q9UKM7 699 aa15.27■□□□□ 0.03
VPS33B-202ENST00000535906 DDX60LQ5H9U9 1706 aaKnown RBP15.26■□□□□ 0.03
VPS33B-202ENST00000535906 FAM205AQ6ZU69 1335 aa15.26■□□□□ 0.03
VPS33B-202ENST00000535906 CYTH3O43739 400 aa15.26■□□□□ 0.03
VPS33B-202ENST00000535906 PLCG2P16885 1265 aa15.26■□□□□ 0.03
VPS33B-202ENST00000535906 TYW1BQ6NUM6 668 aa15.26■□□□□ 0.03
VPS33B-202ENST00000535906 COL23A1Q86Y22 540 aaPredicted RBP15.26■□□□□ 0.03
VPS33B-202ENST00000535906 SYMPKQ92797 1274 aaKnown RBP15.26■□□□□ 0.03
VPS33B-202ENST00000535906 FERMT2Q96AC1 680 aa15.26■□□□□ 0.03
VPS33B-202ENST00000535906 ATP6V0A2Q9Y487 856 aa15.26■□□□□ 0.03
VPS33B-202ENST00000535906 PAXBP1Q9Y5B6 917 aa15.26■□□□□ 0.03
VPS33B-202ENST00000535906 SNED1Q8TER0 1413 aa15.26■□□□□ 0.03
VPS33B-202ENST00000535906 BMP15O95972 392 aa15.26■□□□□ 0.03
VPS33B-202ENST00000535906 SRGNP10124 158 aa15.26■□□□□ 0.03
VPS33B-202ENST00000535906 ATP2C1P98194 919 aaPredicted RBP15.26■□□□□ 0.03
VPS33B-202ENST00000535906 FANCCQ00597 558 aa15.26■□□□□ 0.03
VPS33B-202ENST00000535906 RASGRP2Q7LDG7 609 aa15.26■□□□□ 0.03
VPS33B-202ENST00000535906 DHX58Q96C10 678 aa15.26■□□□□ 0.03
VPS33B-202ENST00000535906 EYA3Q99504 573 aa15.26■□□□□ 0.03
VPS33B-202ENST00000535906 GOLGB1Q14789 3259 aaKnown RBP15.26■□□□□ 0.03
VPS33B-202ENST00000535906 MYH1P12882 1939 aa15.25■□□□□ 0.03
VPS33B-202ENST00000535906 TMC4Q7Z404 712 aa15.25■□□□□ 0.03
VPS33B-202ENST00000535906 SLF2Q8IX21 1173 aa15.25■□□□□ 0.03
VPS33B-202ENST00000535906 SMARCE1Q969G3 411 aa15.25■□□□□ 0.03
VPS33B-202ENST00000535906 ZNF287Q9HBT7 754 aa15.25■□□□□ 0.03
VPS33B-202ENST00000535906 DAGLAQ9Y4D2 1042 aa15.25■□□□□ 0.03
VPS33B-202ENST00000535906 VWA3AA6NCI4 1184 aa15.25■□□□□ 0.03
VPS33B-202ENST00000535906 PALM3A6NDB9 673 aaPredicted RBP15.25■□□□□ 0.03
VPS33B-202ENST00000535906 GOLGA8HP0CJ92 632 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms