RNA–Protein interactions for RNA: ENST00000535871.1

CDCA3-205, Transcript of cell division cycle associated 3, humanhuman

TSL 5

Gene CDCA3, Length 454 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-205ENST00000535871 SMARCC2Q8TAQ2 1214 aa7.59□□□□□ -1.19
CDCA3-205ENST00000535871 CCDC97Q96F63 343 aaPredicted RBP7.59□□□□□ -1.19
CDCA3-205ENST00000535871 TEPSINQ96N21 525 aa7.59□□□□□ -1.19
CDCA3-205ENST00000535871 DEFB129Q9H1M3 183 aa7.59□□□□□ -1.19
CDCA3-205ENST00000535871 BMP2KQ9NSY1 1161 aaPredicted RBP7.59□□□□□ -1.19
CDCA3-205ENST00000535871 MTMR4Q9NYA4 1195 aa7.59□□□□□ -1.19
CDCA3-205ENST00000535871 TACC3Q9Y6A5 838 aa7.59□□□□□ -1.19
CDCA3-205ENST00000535871 CYP2D7A0A087X1C5 515 aa7.58□□□□□ -1.2
CDCA3-205ENST00000535871 CTNND1O60716 968 aaKnown RBP7.58□□□□□ -1.2
CDCA3-205ENST00000535871 DDNO94850 711 aaPredicted RBP7.58□□□□□ -1.2
CDCA3-205ENST00000535871 CYP2D6P10635 497 aa7.58□□□□□ -1.2
CDCA3-205ENST00000535871 IFNAR1P17181 557 aa7.58□□□□□ -1.2
CDCA3-205ENST00000535871 CLCN1P35523 988 aa7.58□□□□□ -1.2
CDCA3-205ENST00000535871 CERKLQ49MI3 558 aaPredicted RBP7.58□□□□□ -1.2
CDCA3-205ENST00000535871 CLEC17AQ6ZS10 378 aa7.58□□□□□ -1.2
CDCA3-205ENST00000535871 ZSCAN29Q8IWY8 852 aaPredicted RBP7.58□□□□□ -1.2
CDCA3-205ENST00000535871 ZNF654Q8IZM8 581 aa7.58□□□□□ -1.2
CDCA3-205ENST00000535871 WASF1Q92558 559 aa7.58□□□□□ -1.2
CDCA3-205ENST00000535871 SH2D4AQ9H788 454 aa7.58□□□□□ -1.2
CDCA3-205ENST00000535871 DNAJC18Q9H819 358 aa7.58□□□□□ -1.2
CDCA3-205ENST00000535871 CABP5Q9NP86 173 aa7.58□□□□□ -1.2
CDCA3-205ENST00000535871 TOMM22Q9NS69 142 aa7.58□□□□□ -1.2
CDCA3-205ENST00000535871 CHMP5Q9NZZ3 219 aa7.58□□□□□ -1.2
CDCA3-205ENST00000535871 SAP30BPQ9UHR5 308 aaKnown RBP7.58□□□□□ -1.2
CDCA3-205ENST00000535871 ZNF112Q9UJU3 913 aa7.58□□□□□ -1.2
CDCA3-205ENST00000535871 HPS5Q9UPZ3 1129 aa7.58□□□□□ -1.2
CDCA3-205ENST00000535871 ADAMTSL1Q8N6G6 1762 aa7.58□□□□□ -1.2
CDCA3-205ENST00000535871 SIPA1L1O43166 1804 aa7.57□□□□□ -1.2
CDCA3-205ENST00000535871 KLF18A0A0U1RQI7 1052 aa7.57□□□□□ -1.2
CDCA3-205ENST00000535871 CPLX1O14810 134 aa7.57□□□□□ -1.2
CDCA3-205ENST00000535871 PLA2G6O60733 806 aa7.57□□□□□ -1.2
CDCA3-205ENST00000535871 SNHG28P0DPA3 235 aa7.57□□□□□ -1.2
CDCA3-205ENST00000535871 CPA1P15085 419 aa7.57□□□□□ -1.2
CDCA3-205ENST00000535871 VEGFAP15692 232 aaPredicted RBP7.57□□□□□ -1.2
CDCA3-205ENST00000535871 EPHX2P34913 555 aa7.57□□□□□ -1.2
CDCA3-205ENST00000535871 EPS15P42566 896 aa7.57□□□□□ -1.2
CDCA3-205ENST00000535871 METAP2P50579 478 aaKnown RBP eCLIP7.57□□□□□ -1.2
CDCA3-205ENST00000535871 TRAF1Q13077 416 aa7.57□□□□□ -1.2
CDCA3-205ENST00000535871 MAP3K11Q16584 847 aa7.57□□□□□ -1.2
CDCA3-205ENST00000535871 RRP12Q5JTH9 1297 aaKnown RBP7.57□□□□□ -1.2
CDCA3-205ENST00000535871 NOL9Q5SY16 702 aaKnown RBP7.57□□□□□ -1.2
CDCA3-205ENST00000535871 GPATCH4Q5T3I0 446 aaKnown RBP7.57□□□□□ -1.2
CDCA3-205ENST00000535871 NFXL1Q6ZNB6 911 aa7.57□□□□□ -1.2
CDCA3-205ENST00000535871 SAMD7Q7Z3H4 446 aa7.57□□□□□ -1.2
CDCA3-205ENST00000535871 SULF1Q8IWU6 871 aa7.57□□□□□ -1.2
CDCA3-205ENST00000535871 FANCBQ8NB91 859 aa7.57□□□□□ -1.2
CDCA3-205ENST00000535871 GMCL1P1Q8NEA9 526 aa7.57□□□□□ -1.2
CDCA3-205ENST00000535871 CTCFLQ8NI51 663 aaPredicted RBP7.57□□□□□ -1.2
CDCA3-205ENST00000535871 DCPSQ96C86 337 aaKnown RBP7.57□□□□□ -1.2
CDCA3-205ENST00000535871 DYNLL2Q96FJ2 89 aa7.57□□□□□ -1.2
CDCA3-205ENST00000535871 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.57□□□□□ -1.2
CDCA3-205ENST00000535871 REPIN1Q9BWE0 567 aaKnown RBP7.57□□□□□ -1.2
CDCA3-205ENST00000535871 RNF26Q9BY78 433 aaPredicted RBP7.57□□□□□ -1.2
CDCA3-205ENST00000535871 ZNF341Q9BYN7 854 aa7.57□□□□□ -1.2
CDCA3-205ENST00000535871 TAF1DQ9H5J8 278 aaPredicted RBP7.57□□□□□ -1.2
CDCA3-205ENST00000535871 KAT14Q9H8E8 782 aa7.57□□□□□ -1.2
CDCA3-205ENST00000535871 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7.57□□□□□ -1.2
CDCA3-205ENST00000535871 VEZTQ9HBM0 779 aa7.57□□□□□ -1.2
CDCA3-205ENST00000535871 IL17RBQ9NRM6 502 aa7.57□□□□□ -1.2
CDCA3-205ENST00000535871 SMC3Q9UQE7 1217 aa7.57□□□□□ -1.2
CDCA3-205ENST00000535871 BOLA1Q9Y3E2 137 aa7.57□□□□□ -1.2
CDCA3-205ENST00000535871 CLRN2A0PK11 232 aa7.56□□□□□ -1.2
CDCA3-205ENST00000535871 GOLGA8BA8MQT2 603 aa7.56□□□□□ -1.2
CDCA3-205ENST00000535871 PHF20L1A8MW92 1017 aa7.56□□□□□ -1.2
CDCA3-205ENST00000535871 TCP10L2B9ZVM9 353 aa7.56□□□□□ -1.2
CDCA3-205ENST00000535871 hCG_1984214I3L0E3 225 aa7.56□□□□□ -1.2
CDCA3-205ENST00000535871 KIF3CO14782 793 aa7.56□□□□□ -1.2
CDCA3-205ENST00000535871 PRDM1O75626 825 aa7.56□□□□□ -1.2
CDCA3-205ENST00000535871 CAP2P40123 477 aa7.56□□□□□ -1.2
CDCA3-205ENST00000535871 HIRAP54198 1017 aaPredicted RBP7.56□□□□□ -1.2
CDCA3-205ENST00000535871 FKBP1BP68106 108 aa7.56□□□□□ -1.2
CDCA3-205ENST00000535871 MDM2Q00987 491 aaPredicted RBP7.56□□□□□ -1.2
CDCA3-205ENST00000535871 APOBRQ0VD83 1088 aa7.56□□□□□ -1.2
CDCA3-205ENST00000535871 SCRN1Q12765 414 aa7.56□□□□□ -1.2
CDCA3-205ENST00000535871 TCP10Q12799 353 aa7.56□□□□□ -1.2
CDCA3-205ENST00000535871 NTRK3Q16288 839 aa7.56□□□□□ -1.2
CDCA3-205ENST00000535871 RTN1Q16799 776 aa7.56□□□□□ -1.2
CDCA3-205ENST00000535871 ABCB5Q2M3G0 1257 aa7.56□□□□□ -1.2
CDCA3-205ENST00000535871 TBC1D10BQ4KMP7 808 aaPredicted RBP7.56□□□□□ -1.2
CDCA3-205ENST00000535871 ASPRV1Q53RT3 343 aa7.56□□□□□ -1.2
CDCA3-205ENST00000535871 ANGEL2Q5VTE6 544 aaKnown RBP7.56□□□□□ -1.2
CDCA3-205ENST00000535871 CDC37L1Q7L3B6 337 aa7.56□□□□□ -1.2
CDCA3-205ENST00000535871 ZFPM1Q8IX07 1006 aa7.56□□□□□ -1.2
CDCA3-205ENST00000535871 TRIM22Q8IYM9 498 aa7.56□□□□□ -1.2
CDCA3-205ENST00000535871 ZNF713Q8N859 430 aaPredicted RBP7.56□□□□□ -1.2
CDCA3-205ENST00000535871 PNMA1Q8ND90 353 aa7.56□□□□□ -1.2
CDCA3-205ENST00000535871 NSUN7Q8NE18 718 aaKnown RBP7.56□□□□□ -1.2
CDCA3-205ENST00000535871 TRPM4Q8TD43 1214 aa7.56□□□□□ -1.2
CDCA3-205ENST00000535871 OXER1Q8TDS5 423 aa7.56□□□□□ -1.2
CDCA3-205ENST00000535871 LPAR1Q92633 364 aa7.56□□□□□ -1.2
CDCA3-205ENST00000535871 CEP95Q96GE4 821 aa7.56□□□□□ -1.2
CDCA3-205ENST00000535871 GMCL1Q96IK5 515 aa7.56□□□□□ -1.2
CDCA3-205ENST00000535871 TMEM39BQ9GZU3 492 aa7.56□□□□□ -1.2
CDCA3-205ENST00000535871 MAF1Q9H063 256 aa7.56□□□□□ -1.2
CDCA3-205ENST00000535871 GPCPD1Q9NPB8 672 aa7.56□□□□□ -1.2
CDCA3-205ENST00000535871 GGA3Q9NZ52 723 aa7.56□□□□□ -1.2
CDCA3-205ENST00000535871 PNMA2Q9UL42 364 aa7.56□□□□□ -1.2
CDCA3-205ENST00000535871 BRPF3Q9ULD4 1205 aa7.56□□□□□ -1.2
CDCA3-205ENST00000535871 PCDHAC2Q9Y5I4 1007 aa7.56□□□□□ -1.2
CDCA3-205ENST00000535871 ATP6V1DQ9Y5K8 247 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms