RNA–Protein interactions for RNA: ENST00000535375.1

PRKDC-205, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 464 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-205ENST00000535375 ZNRF3Q9ULT6 936 aa8.44□□□□□ -1.06
PRKDC-205ENST00000535375 LRRN2O75325 713 aa8.43□□□□□ -1.06
PRKDC-205ENST00000535375 UBOX5O94941 541 aa8.43□□□□□ -1.06
PRKDC-205ENST00000535375 NME1P15531 152 aaKnown RBP8.43□□□□□ -1.06
PRKDC-205ENST00000535375 POLR2BP30876 1174 aaKnown RBP8.43□□□□□ -1.06
PRKDC-205ENST00000535375 TMPRSS7Q7RTY8 843 aa8.43□□□□□ -1.06
PRKDC-205ENST00000535375 DTWD2Q8NBA8 298 aa8.43□□□□□ -1.06
PRKDC-205ENST00000535375 CRBNQ96SW2 442 aa8.43□□□□□ -1.06
PRKDC-205ENST00000535375 KRTAP9-2Q9BYQ4 174 aa8.43□□□□□ -1.06
PRKDC-205ENST00000535375 RC3H2Q9HBD1 1191 aaKnown RBP8.43□□□□□ -1.06
PRKDC-205ENST00000535375 PPT2Q9UMR5 302 aa8.43□□□□□ -1.06
PRKDC-205ENST00000535375 EFR3BQ9Y2G0 817 aa8.43□□□□□ -1.06
PRKDC-205ENST00000535375 MEIS3P2A8K0S8 358 aa8.42□□□□□ -1.06
PRKDC-205ENST00000535375 BIN1O00499 593 aa8.42□□□□□ -1.06
PRKDC-205ENST00000535375 CLEC3AO75596 197 aa8.42□□□□□ -1.06
PRKDC-205ENST00000535375 TPP2P29144 1249 aaPredicted RBP8.42□□□□□ -1.06
PRKDC-205ENST00000535375 CLEC16AQ2KHT3 1053 aa8.42□□□□□ -1.06
PRKDC-205ENST00000535375 GPR62Q9BZJ7 368 aa8.42□□□□□ -1.06
PRKDC-205ENST00000535375 MBNL3Q9NUK0 354 aaKnown RBP8.42□□□□□ -1.06
PRKDC-205ENST00000535375 INPP5FQ9Y2H2 1132 aa8.42□□□□□ -1.06
PRKDC-205ENST00000535375 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.41□□□□□ -1.06
PRKDC-205ENST00000535375 RNASE1P07998 156 aaKnown RBP8.41□□□□□ -1.06
PRKDC-205ENST00000535375 ERCC5P28715 1186 aaPredicted RBP8.41□□□□□ -1.06
PRKDC-205ENST00000535375 CBLL1Q75N03 491 aa8.41□□□□□ -1.06
PRKDC-205ENST00000535375 CREG2Q8IUH2 290 aa8.41□□□□□ -1.06
PRKDC-205ENST00000535375 DUSP15Q9H1R2 295 aaPredicted RBP8.41□□□□□ -1.06
PRKDC-205ENST00000535375 PRDM7Q9NQW5 492 aa8.41□□□□□ -1.06
PRKDC-205ENST00000535375 GINM1Q9NU53 330 aa8.41□□□□□ -1.06
PRKDC-205ENST00000535375 RBAK-RBAKDNI3L0D1 243 aa8.4□□□□□ -1.06
PRKDC-205ENST00000535375 TNFRSF10CO14798 259 aa8.4□□□□□ -1.06
PRKDC-205ENST00000535375 TCF3P15923 654 aa8.4□□□□□ -1.06
PRKDC-205ENST00000535375 DHRS1Q96LJ7 313 aa8.4□□□□□ -1.06
PRKDC-205ENST00000535375 ACBD3Q9H3P7 528 aa8.4□□□□□ -1.06
PRKDC-205ENST00000535375 ADAMTS6Q9UKP5 1117 aa8.4□□□□□ -1.06
PRKDC-205ENST00000535375 FAM86C2PA6NEL3 165 aa8.39□□□□□ -1.07
PRKDC-205ENST00000535375 NBPF12Q5TAG4 269 aaPredicted RBP8.39□□□□□ -1.07
PRKDC-205ENST00000535375 INTS3Q68E01 1043 aaKnown RBP8.39□□□□□ -1.07
PRKDC-205ENST00000535375 RASGRP4Q8TDF6 673 aa8.39□□□□□ -1.07
PRKDC-205ENST00000535375 CPLX3Q8WVH0 158 aa8.39□□□□□ -1.07
PRKDC-205ENST00000535375 SYTL4Q96C24 671 aaPredicted RBP8.39□□□□□ -1.07
PRKDC-205ENST00000535375 CCDC120Q96HB5 630 aa8.39□□□□□ -1.07
PRKDC-205ENST00000535375 SLC9A7Q96T83 725 aa8.39□□□□□ -1.07
PRKDC-205ENST00000535375 TM9SF2Q99805 663 aa8.39□□□□□ -1.07
PRKDC-205ENST00000535375 DUSP13Q9UII6 198 aa8.39□□□□□ -1.07
PRKDC-205ENST00000535375 KRTAP9-6A0A140TA67 174 aa8.38□□□□□ -1.07
PRKDC-205ENST00000535375 E9PSI1 815 aa8.38□□□□□ -1.07
PRKDC-205ENST00000535375 JUNBP17275 347 aaPredicted RBP8.38□□□□□ -1.07
PRKDC-205ENST00000535375 SOX9P48436 509 aa8.38□□□□□ -1.07
PRKDC-205ENST00000535375 EIF6P56537 245 aaKnown RBP8.38□□□□□ -1.07
PRKDC-205ENST00000535375 CCDC81Q6ZN84 652 aa8.38□□□□□ -1.07
PRKDC-205ENST00000535375 TSPYL5Q86VY4 417 aaPredicted RBP8.38□□□□□ -1.07
PRKDC-205ENST00000535375 RBBP8NLQ8NC74 664 aaPredicted RBP8.38□□□□□ -1.07
PRKDC-205ENST00000535375 LRRN4CLQ8ND94 238 aa8.38□□□□□ -1.07
PRKDC-205ENST00000535375 VWCEQ96DN2 955 aa8.38□□□□□ -1.07
PRKDC-205ENST00000535375 SLC6A18Q96N87 628 aa8.38□□□□□ -1.07
PRKDC-205ENST00000535375 MKRN2Q9H000 416 aaKnown RBP8.38□□□□□ -1.07
PRKDC-205ENST00000535375 WASH4PA8MWX3 477 aa8.37□□□□□ -1.07
PRKDC-205ENST00000535375 SRFP11831 508 aa8.37□□□□□ -1.07
PRKDC-205ENST00000535375 LTKP29376 864 aa8.37□□□□□ -1.07
PRKDC-205ENST00000535375 GJA8P48165 433 aa8.37□□□□□ -1.07
PRKDC-205ENST00000535375 ATG4DQ86TL0 474 aaPredicted RBP8.37□□□□□ -1.07
PRKDC-205ENST00000535375 VPS37DQ86XT2 251 aa8.37□□□□□ -1.07
PRKDC-205ENST00000535375 ZNF512BQ96KM6 892 aaPredicted RBP8.37□□□□□ -1.07
PRKDC-205ENST00000535375 SLAMF8Q9P0V8 285 aa8.37□□□□□ -1.07
PRKDC-205ENST00000535375 ESR1P03372 595 aa8.36□□□□□ -1.07
PRKDC-205ENST00000535375 GUCY2CP25092 1073 aa8.36□□□□□ -1.07
PRKDC-205ENST00000535375 TXKP42681 527 aa8.36□□□□□ -1.07
PRKDC-205ENST00000535375 NASPP49321 788 aaPredicted RBP8.36□□□□□ -1.07
PRKDC-205ENST00000535375 NMIQ13287 307 aaPredicted RBP8.36□□□□□ -1.07
PRKDC-205ENST00000535375 GNL2Q13823 731 aaKnown RBP8.36□□□□□ -1.07
PRKDC-205ENST00000535375 NBPF9Q3BBW0 867 aa8.36□□□□□ -1.07
PRKDC-205ENST00000535375 TMEM192Q8IY95 271 aa8.36□□□□□ -1.07
PRKDC-205ENST00000535375 TAB3Q8N5C8 712 aaPredicted RBP8.36□□□□□ -1.07
PRKDC-205ENST00000535375 ENOX1Q8TC92 643 aaKnown RBP8.36□□□□□ -1.07
PRKDC-205ENST00000535375 ASIC4Q96FT7 647 aa8.36□□□□□ -1.07
PRKDC-205ENST00000535375 EGR3Q06889 387 aa8.35□□□□□ -1.07
PRKDC-205ENST00000535375 GAB4Q2WGN9 574 aa8.35□□□□□ -1.07
PRKDC-205ENST00000535375 LSRQ86X29 649 aaPredicted RBP8.35□□□□□ -1.07
PRKDC-205ENST00000535375 SEC16BQ96JE7 1060 aa8.35□□□□□ -1.07
PRKDC-205ENST00000535375 ALPK1Q96QP1 1244 aa8.35□□□□□ -1.07
PRKDC-205ENST00000535375 SRRTQ9BXP5 876 aaKnown RBP8.35□□□□□ -1.07
PRKDC-205ENST00000535375 CAPN10Q9HC96 672 aa8.35□□□□□ -1.07
PRKDC-205ENST00000535375 SUCOQ9UBS9 1254 aaKnown RBP8.35□□□□□ -1.07
PRKDC-205ENST00000535375 FBXL21Q9UKT6 434 aa8.35□□□□□ -1.07
PRKDC-205ENST00000535375 RNF114Q9Y508 228 aa8.35□□□□□ -1.07
PRKDC-205ENST00000535375 SSU72P8A0A1W2PR75 194 aa8.34□□□□□ -1.07
PRKDC-205ENST00000535375 SHISA3A0PJX4 238 aa8.34□□□□□ -1.07
PRKDC-205ENST00000535375 ACRP10323 421 aa8.34□□□□□ -1.07
PRKDC-205ENST00000535375 RUFY4Q6ZNE9 571 aa8.34□□□□□ -1.07
PRKDC-205ENST00000535375 CCDC144CPQ8IYA2 1237 aa8.34□□□□□ -1.07
PRKDC-205ENST00000535375 OR6P1Q8NGX9 317 aa8.34□□□□□ -1.07
PRKDC-205ENST00000535375 FMNL2Q96PY5 1086 aa8.34□□□□□ -1.07
PRKDC-205ENST00000535375 PCDHA11Q9Y5I1 949 aa8.34□□□□□ -1.07
PRKDC-205ENST00000535375 ITGB5P18084 799 aa8.33□□□□□ -1.08
PRKDC-205ENST00000535375 AFMP43652 599 aa8.33□□□□□ -1.08
PRKDC-205ENST00000535375 CTNND2Q9UQB3 1225 aa8.33□□□□□ -1.08
PRKDC-205ENST00000535375 PCDHB12Q9Y5F1 795 aa8.33□□□□□ -1.08
PRKDC-205ENST00000535375 GDNFP39905 211 aa8.32□□□□□ -1.08
PRKDC-205ENST00000535375 GIPRP48546 466 aa8.32□□□□□ -1.08
PRKDC-205ENST00000535375 PMS1P54277 932 aaKnown RBP8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms