RNA–Protein interactions for RNA: ENST00000535302.6

SPG11-203, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 7,288 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-203ENST00000535302 SERTAD1Q9UHV2 236 aa13.99□□□□□ -0.17
SPG11-203ENST00000535302 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.99□□□□□ -0.17
SPG11-203ENST00000535302 CCDC26Q8TAB7 109 aa13.99□□□□□ -0.17
SPG11-203ENST00000535302 SLF1Q9BQI6 1058 aa13.99□□□□□ -0.17
SPG11-203ENST00000535302 AZI2Q9H6S1 392 aa13.99□□□□□ -0.17
SPG11-203ENST00000535302 SBNO1A3KN83 1393 aa13.99□□□□□ -0.17
SPG11-203ENST00000535302 SESN3P58005 492 aa13.99□□□□□ -0.17
SPG11-203ENST00000535302 DCUN1D2Q6PH85 259 aa13.99□□□□□ -0.17
SPG11-203ENST00000535302 LCA5Q86VQ0 697 aa13.99□□□□□ -0.17
SPG11-203ENST00000535302 CARD6Q9BX69 1037 aa13.99□□□□□ -0.17
SPG11-203ENST00000535302 SUDS3Q9H7L9 328 aaPredicted RBP13.99□□□□□ -0.17
SPG11-203ENST00000535302 DNM3Q9UQ16 869 aa13.99□□□□□ -0.17
SPG11-203ENST00000535302 FRMD3A2A2Y4 597 aa13.99□□□□□ -0.17
SPG11-203ENST00000535302 CYP2J2P51589 502 aa13.99□□□□□ -0.17
SPG11-203ENST00000535302 TYW1BQ6NUM6 668 aa13.99□□□□□ -0.17
SPG11-203ENST00000535302 WDR66Q8TBY9 1149 aa13.99□□□□□ -0.17
SPG11-203ENST00000535302 NAPGQ99747 312 aaPredicted RBP13.99□□□□□ -0.17
SPG11-203ENST00000535302 CASQ2O14958 399 aaPredicted RBP13.98□□□□□ -0.17
SPG11-203ENST00000535302 SGSM2O43147 1006 aa13.98□□□□□ -0.17
SPG11-203ENST00000535302 CLCN1P35523 988 aa13.98□□□□□ -0.17
SPG11-203ENST00000535302 GUCY2FP51841 1108 aa13.98□□□□□ -0.17
SPG11-203ENST00000535302 CEP104O60308 925 aa13.98□□□□□ -0.17
SPG11-203ENST00000535302 KBTBD3Q8NAB2 608 aa13.98□□□□□ -0.17
SPG11-203ENST00000535302 TECP42680 631 aa13.98□□□□□ -0.17
SPG11-203ENST00000535302 ADKP55263 362 aaKnown RBP13.98□□□□□ -0.17
SPG11-203ENST00000535302 POSTNQ15063 836 aa13.98□□□□□ -0.17
SPG11-203ENST00000535302 TTC19Q6DKK2 380 aaPredicted RBP13.98□□□□□ -0.17
SPG11-203ENST00000535302 C8orf74Q6P047 294 aa13.98□□□□□ -0.17
SPG11-203ENST00000535302 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.98□□□□□ -0.17
SPG11-203ENST00000535302 RIOK3O14730 519 aaKnown RBP13.98□□□□□ -0.17
SPG11-203ENST00000535302 PTH1RQ03431 593 aa13.98□□□□□ -0.17
SPG11-203ENST00000535302 CHAMP1Q96JM3 812 aa13.98□□□□□ -0.17
SPG11-203ENST00000535302 NAP1L4Q99733 375 aaKnown RBP13.98□□□□□ -0.17
SPG11-203ENST00000535302 MRPL46Q9H2W6 279 aaKnown RBP13.98□□□□□ -0.17
SPG11-203ENST00000535302 PRPF6O94906 941 aaKnown RBP13.98□□□□□ -0.17
SPG11-203ENST00000535302 BAG2O95816 211 aa13.98□□□□□ -0.17
SPG11-203ENST00000535302 LRRC24Q50LG9 513 aa13.98□□□□□ -0.17
SPG11-203ENST00000535302 PNMA8AQ86V59 439 aaPredicted RBP13.98□□□□□ -0.17
SPG11-203ENST00000535302 GPR161Q8N6U8 529 aaKnown RBP13.98□□□□□ -0.17
SPG11-203ENST00000535302 AFAP1L1Q8TED9 768 aa13.98□□□□□ -0.17
SPG11-203ENST00000535302 RMDN2Q96LZ7 410 aa13.98□□□□□ -0.17
SPG11-203ENST00000535302 EIF2AK4Q9P2K8 1649 aaKnown RBP13.98□□□□□ -0.17
SPG11-203ENST00000535302 SMCO2A6NFE2 343 aa13.98□□□□□ -0.17
SPG11-203ENST00000535302 CETN3O15182 167 aa13.98□□□□□ -0.17
SPG11-203ENST00000535302 WDR46O15213 610 aaKnown RBP13.98□□□□□ -0.17
SPG11-203ENST00000535302 DLGAP5Q15398 846 aa13.98□□□□□ -0.17
SPG11-203ENST00000535302 KAZNQ674X7 775 aa13.98□□□□□ -0.17
SPG11-203ENST00000535302 KIAA0825Q8IV33 1275 aa13.98□□□□□ -0.17
SPG11-203ENST00000535302 NIM1KQ8IY84 436 aa13.98□□□□□ -0.17
SPG11-203ENST00000535302 SLC12A1Q13621 1099 aa13.97□□□□□ -0.17
SPG11-203ENST00000535302 HHATQ5VTY9 493 aa13.97□□□□□ -0.17
SPG11-203ENST00000535302 RABGAP1Q9Y3P9 1069 aa13.97□□□□□ -0.17
SPG11-203ENST00000535302 PCDHB13Q9Y5F0 798 aa13.97□□□□□ -0.17
SPG11-203ENST00000535302 KRT15P19012 456 aa13.97□□□□□ -0.17
SPG11-203ENST00000535302 MFSD14BQ5SR56 506 aa13.97□□□□□ -0.17
SPG11-203ENST00000535302 SCYL1Q96KG9 808 aa13.97□□□□□ -0.17
SPG11-203ENST00000535302 THRAP3Q9Y2W1 955 aaKnown RBP13.97□□□□□ -0.17
SPG11-203ENST00000535302 NEURL1BA8MQ27 555 aa13.97□□□□□ -0.17
SPG11-203ENST00000535302 ME3Q16798 604 aa13.97□□□□□ -0.17
SPG11-203ENST00000535302 HDXQ7Z353 690 aa13.97□□□□□ -0.17
SPG11-203ENST00000535302 VPS37BQ9H9H4 285 aa13.97□□□□□ -0.17
SPG11-203ENST00000535302 GOLGA6CA6NDK9 693 aa13.97□□□□□ -0.17
SPG11-203ENST00000535302 GOLGA6BA6NDN3 693 aa13.97□□□□□ -0.17
SPG11-203ENST00000535302 USP17L12C9JPN9 530 aa13.97□□□□□ -0.17
SPG11-203ENST00000535302 USP17L21D6R901 530 aa13.97□□□□□ -0.17
SPG11-203ENST00000535302 GOLGA6DP0CG33 693 aa13.97□□□□□ -0.17
SPG11-203ENST00000535302 MX2P20592 715 aa13.97□□□□□ -0.17
SPG11-203ENST00000535302 CLNS1AP54105 237 aaKnown RBP13.97□□□□□ -0.17
SPG11-203ENST00000535302 CTSWP56202 376 aa13.97□□□□□ -0.17
SPG11-203ENST00000535302 NLRP12P59046 1061 aa13.97□□□□□ -0.17
SPG11-203ENST00000535302 EIF4A1P60842 406 aaKnown RBP13.97□□□□□ -0.17
SPG11-203ENST00000535302 SECISBP2LQ93073 1101 aaKnown RBP13.97□□□□□ -0.17
SPG11-203ENST00000535302 GOLGA6AQ9NYA3 693 aa13.97□□□□□ -0.17
SPG11-203ENST00000535302 CUTAO60888 179 aa13.97□□□□□ -0.17
SPG11-203ENST00000535302 LIN9Q5TKA1 542 aa13.97□□□□□ -0.17
SPG11-203ENST00000535302 CCDC89Q8N998 374 aa13.97□□□□□ -0.17
SPG11-203ENST00000535302 POMGNT1Q8WZA1 660 aa13.97□□□□□ -0.17
SPG11-203ENST00000535302 NUP160Q12769 1436 aa13.97□□□□□ -0.17
SPG11-203ENST00000535302 TNNI1P19237 187 aa13.96□□□□□ -0.17
SPG11-203ENST00000535302 SMCR8Q8TEV9 937 aaPredicted RBP13.96□□□□□ -0.17
SPG11-203ENST00000535302 UBXN2AP68543 259 aa13.96□□□□□ -0.17
SPG11-203ENST00000535302 PRR16Q569H4 304 aa13.96□□□□□ -0.17
SPG11-203ENST00000535302 MORC4Q8TE76 937 aa13.96□□□□□ -0.17
SPG11-203ENST00000535302 ZNF653Q96CK0 615 aa13.96□□□□□ -0.17
SPG11-203ENST00000535302 RIOK1Q9BRS2 568 aaKnown RBP13.96□□□□□ -0.17
SPG11-203ENST00000535302 FNDC3AQ9Y2H6 1198 aaKnown RBP13.96□□□□□ -0.17
SPG11-203ENST00000535302 A0A0D9SFI3 127 aa13.96□□□□□ -0.17
SPG11-203ENST00000535302 ALAS1P13196 640 aa13.96□□□□□ -0.17
SPG11-203ENST00000535302 ABCB4P21439 1286 aa13.96□□□□□ -0.17
SPG11-203ENST00000535302 IRX3P78415 501 aaPredicted RBP13.96□□□□□ -0.17
SPG11-203ENST00000535302 PPFIA1Q13136 1202 aa13.96□□□□□ -0.17
SPG11-203ENST00000535302 GBP1P32455 592 aa13.96□□□□□ -0.17
SPG11-203ENST00000535302 ELF2Q15723 593 aa13.96□□□□□ -0.17
SPG11-203ENST00000535302 PTPN21Q16825 1174 aa13.96□□□□□ -0.17
SPG11-203ENST00000535302 GADL1Q6ZQY3 521 aa13.96□□□□□ -0.17
SPG11-203ENST00000535302 CXorf38Q8TB03 319 aa13.96□□□□□ -0.17
SPG11-203ENST00000535302 GLG1Q92896 1179 aa13.96□□□□□ -0.17
SPG11-203ENST00000535302 NFE2L3Q9Y4A8 694 aa13.96□□□□□ -0.17
SPG11-203ENST00000535302 MROH5Q6ZUA9 1318 aa13.96□□□□□ -0.17
SPG11-203ENST00000535302 CHL1O00533 1208 aa13.96□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms