RNA–Protein interactions for RNA: ENST00000533834.1

RNPC3-209, Transcript of RNA binding region (RNP1, RRM) containing 3, humanhuman

TSL 1 (best)

Gene RNPC3, Length 3,658 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNPC3-209ENST00000533834 SLFN14P0C7P3 912 aa8.21□□□□□ -1.1
RNPC3-209ENST00000533834 SNHG28P0DPA3 235 aa8.21□□□□□ -1.1
RNPC3-209ENST00000533834 ERCC5P28715 1186 aaPredicted RBP8.21□□□□□ -1.1
RNPC3-209ENST00000533834 IGHMBP2P38935 993 aaKnown RBP8.21□□□□□ -1.1
RNPC3-209ENST00000533834 GRM4Q14833 912 aa8.21□□□□□ -1.1
RNPC3-209ENST00000533834 COBLL1Q53SF7 1204 aa8.21□□□□□ -1.1
RNPC3-209ENST00000533834 C16orf45Q96MC5 204 aaPredicted RBP8.21□□□□□ -1.1
RNPC3-209ENST00000533834 SH3GLB2Q9NR46 395 aa8.21□□□□□ -1.1
RNPC3-209ENST00000533834 PLCD1P51178 756 aa8.2□□□□□ -1.1
RNPC3-209ENST00000533834 NFIXQ14938 502 aa8.2□□□□□ -1.1
RNPC3-209ENST00000533834 RASGRP2Q7LDG7 609 aa8.2□□□□□ -1.1
RNPC3-209ENST00000533834 ANKRD18AQ8IVF6 992 aa8.2□□□□□ -1.1
RNPC3-209ENST00000533834 CCDC150Q8NCX0 1101 aa8.2□□□□□ -1.1
RNPC3-209ENST00000533834 VPS54Q9P1Q0 977 aa8.2□□□□□ -1.1
RNPC3-209ENST00000533834 DDX41Q9UJV9 622 aaKnown RBP8.2□□□□□ -1.1
RNPC3-209ENST00000533834 STXBP3O00186 592 aa8.2□□□□□ -1.1
RNPC3-209ENST00000533834 TNNT1P13805 278 aa8.2□□□□□ -1.1
RNPC3-209ENST00000533834 EHHADHQ08426 723 aa8.2□□□□□ -1.1
RNPC3-209ENST00000533834 RSRC2Q7L4I2 434 aaKnown RBP8.2□□□□□ -1.1
RNPC3-209ENST00000533834 MTERF4Q7Z6M4 381 aaKnown RBP8.2□□□□□ -1.1
RNPC3-209ENST00000533834 ZNF507Q8TCN5 953 aa8.2□□□□□ -1.1
RNPC3-209ENST00000533834 MPHOSPH8Q99549 860 aa8.2□□□□□ -1.1
RNPC3-209ENST00000533834 RBM28Q9NW13 759 aaKnown RBP8.2□□□□□ -1.1
RNPC3-209ENST00000533834 ZNF330Q9Y3S2 320 aaPredicted RBP8.2□□□□□ -1.1
RNPC3-209ENST00000533834 BIN1O00499 593 aa8.19□□□□□ -1.1
RNPC3-209ENST00000533834 HOXA10P31260 410 aaPredicted RBP8.19□□□□□ -1.1
RNPC3-209ENST00000533834 FAM177A1Q8N128 213 aaPredicted RBP8.19□□□□□ -1.1
RNPC3-209ENST00000533834 RNF41Q9H4P4 317 aaPredicted RBP8.19□□□□□ -1.1
RNPC3-209ENST00000533834 SAMSN1Q9NSI8 373 aaKnown RBP8.19□□□□□ -1.1
RNPC3-209ENST00000533834 LIMA1Q9UHB6 759 aaKnown RBP8.19□□□□□ -1.1
RNPC3-209ENST00000533834 RLFQ13129 1914 aa8.19□□□□□ -1.1
RNPC3-209ENST00000533834 PHIPQ8WWQ0 1821 aa8.19□□□□□ -1.1
RNPC3-209ENST00000533834 USP17L12C9JPN9 530 aa8.19□□□□□ -1.1
RNPC3-209ENST00000533834 USP17L21D6R901 530 aa8.19□□□□□ -1.1
RNPC3-209ENST00000533834 POLR2DO15514 142 aaKnown RBP8.19□□□□□ -1.1
RNPC3-209ENST00000533834 RASA1P20936 1047 aa8.19□□□□□ -1.1
RNPC3-209ENST00000533834 CLK2P49760 499 aaKnown RBP8.19□□□□□ -1.1
RNPC3-209ENST00000533834 RPS8P62241 208 aaKnown RBP8.19□□□□□ -1.1
RNPC3-209ENST00000533834 GOLGA8FQ08AF8 430 aa8.19□□□□□ -1.1
RNPC3-209ENST00000533834 GOLGA8DPQ0D2H9 430 aa8.19□□□□□ -1.1
RNPC3-209ENST00000533834 PTPN21Q16825 1174 aa8.19□□□□□ -1.1
RNPC3-209ENST00000533834 STAG2Q8N3U4 1231 aa8.19□□□□□ -1.1
RNPC3-209ENST00000533834 WASF1Q92558 559 aa8.19□□□□□ -1.1
RNPC3-209ENST00000533834 SYMPKQ92797 1274 aaKnown RBP8.19□□□□□ -1.1
RNPC3-209ENST00000533834 MMTAG2Q9BU76 263 aaKnown RBP8.19□□□□□ -1.1
RNPC3-209ENST00000533834 ARPP21Q9UBL0 812 aaPredicted RBP8.19□□□□□ -1.1
RNPC3-209ENST00000533834 ZNF215Q9UL58 517 aaPredicted RBP8.19□□□□□ -1.1
RNPC3-209ENST00000533834 PCDHA6Q9UN73 950 aa8.19□□□□□ -1.1
RNPC3-209ENST00000533834 PCDHA8Q9Y5H6 950 aa8.19□□□□□ -1.1
RNPC3-209ENST00000533834 CASP1P29466 404 aa8.19□□□□□ -1.1
RNPC3-209ENST00000533834 TRDNQ13061 729 aa8.19□□□□□ -1.1
RNPC3-209ENST00000533834 CNNM4Q6P4Q7 775 aa8.19□□□□□ -1.1
RNPC3-209ENST00000533834 MLKLQ8NB16 471 aa8.19□□□□□ -1.1
RNPC3-209ENST00000533834 SH3RF3Q8TEJ3 882 aaPredicted RBP8.19□□□□□ -1.1
RNPC3-209ENST00000533834 ESR2Q92731 530 aa8.19□□□□□ -1.1
RNPC3-209ENST00000533834 REXO2Q9Y3B8 237 aaKnown RBP8.19□□□□□ -1.1
RNPC3-209ENST00000533834 SIP14410 1827 aa8.19□□□□□ -1.1
RNPC3-209ENST00000533834 LCTP09848 1927 aa8.19□□□□□ -1.1
RNPC3-209ENST00000533834 GPR75-ASB3A0A0A6YYF3 556 aa8.18□□□□□ -1.1
RNPC3-209ENST00000533834 GOLGA6L4A6NEF3 574 aa8.18□□□□□ -1.1
RNPC3-209ENST00000533834 TEX33O43247 280 aa8.18□□□□□ -1.1
RNPC3-209ENST00000533834 PTMAP06454 111 aaKnown RBP8.18□□□□□ -1.1
RNPC3-209ENST00000533834 TRAPPC10P48553 1259 aa8.18□□□□□ -1.1
RNPC3-209ENST00000533834 TOGARAM2Q6ZUX3 1019 aa8.18□□□□□ -1.1
RNPC3-209ENST00000533834 C16orf86Q6ZW13 317 aa8.18□□□□□ -1.1
RNPC3-209ENST00000533834 DGKHQ86XP1 1220 aa8.18□□□□□ -1.1
RNPC3-209ENST00000533834 KIF18AQ8NI77 898 aa8.18□□□□□ -1.1
RNPC3-209ENST00000533834 MTMR8Q96EF0 704 aa8.18□□□□□ -1.1
RNPC3-209ENST00000533834 NAT10Q9H0A0 1025 aaKnown RBP8.18□□□□□ -1.1
RNPC3-209ENST00000533834 IQSEC3Q9UPP2 1182 aaPredicted RBP8.18□□□□□ -1.1
RNPC3-209ENST00000533834 FHOD1Q9Y613 1164 aa8.18□□□□□ -1.1
RNPC3-209ENST00000533834 ZNFX1Q9P2E3 1918 aaKnown RBP8.18□□□□□ -1.1
RNPC3-209ENST00000533834 ABL1P00519 1130 aa8.18□□□□□ -1.1
RNPC3-209ENST00000533834 GYPCP04921 128 aa8.18□□□□□ -1.1
RNPC3-209ENST00000533834 LMOD1P29536 600 aaPredicted RBP8.18□□□□□ -1.1
RNPC3-209ENST00000533834 ARHGAP25P42331 645 aa8.18□□□□□ -1.1
RNPC3-209ENST00000533834 MAP3K9P80192 1104 aa8.18□□□□□ -1.1
RNPC3-209ENST00000533834 ZNF827Q17R98 1081 aa8.18□□□□□ -1.1
RNPC3-209ENST00000533834 DPY19L2P1Q6NXN4 242 aa8.18□□□□□ -1.1
RNPC3-209ENST00000533834 PROM2Q8N271 834 aa8.18□□□□□ -1.1
RNPC3-209ENST00000533834 CRYGNQ8WXF5 182 aa8.18□□□□□ -1.1
RNPC3-209ENST00000533834 NOL10Q9BSC4 688 aaKnown RBP8.18□□□□□ -1.1
RNPC3-209ENST00000533834 CABP5Q9NP86 173 aa8.18□□□□□ -1.1
RNPC3-209ENST00000533834 KBTBD4Q9NVX7 518 aa8.18□□□□□ -1.1
RNPC3-209ENST00000533834 BAZ2BQ9UIF8 2168 aaKnown RBP8.18□□□□□ -1.1
RNPC3-209ENST00000533834 CPLX1O14810 134 aa8.18□□□□□ -1.1
RNPC3-209ENST00000533834 USP17L8P0C7I0 530 aa8.18□□□□□ -1.1
RNPC3-209ENST00000533834 PMS1P54277 932 aaKnown RBP8.18□□□□□ -1.1
RNPC3-209ENST00000533834 GRAPQ13588 217 aa8.18□□□□□ -1.1
RNPC3-209ENST00000533834 FAM98CQ17RN3 349 aaKnown RBP8.18□□□□□ -1.1
RNPC3-209ENST00000533834 RAD9BQ6WBX8 426 aa8.18□□□□□ -1.1
RNPC3-209ENST00000533834 SMAP1Q8IYB5 467 aaPredicted RBP8.18□□□□□ -1.1
RNPC3-209ENST00000533834 GRAPLQ8TC17 118 aaPredicted RBP8.18□□□□□ -1.1
RNPC3-209ENST00000533834 FERMT2Q96AC1 680 aa8.18□□□□□ -1.1
RNPC3-209ENST00000533834 MRPL44Q9H9J2 332 aaKnown RBP8.18□□□□□ -1.1
RNPC3-209ENST00000533834 ZNF652Q9Y2D9 606 aa8.18□□□□□ -1.1
RNPC3-209ENST00000533834 LOXHD1Q8IVV2 1947 aa8.18□□□□□ -1.1
RNPC3-209ENST00000533834 COL2A1P02458 1487 aaPredicted RBP8.18□□□□□ -1.1
RNPC3-209ENST00000533834 SMCHD1A6NHR9 2005 aa8.17□□□□□ -1.1
RNPC3-209ENST00000533834 TADA3O75528 432 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms