RNA–Protein interactions for RNA: ENST00000533572.5

CTSB-229, Transcript of cathepsin B, humanhuman

TSL 3

Gene CTSB, Length 975 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-229ENST00000533572 USP17L15C9J2P7 530 aa20.34■□□□□ 0.85
CTSB-229ENST00000533572 USP17L13C9JLJ4 530 aa20.34■□□□□ 0.85
CTSB-229ENST00000533572 USP17L11C9JVI0 530 aa20.34■□□□□ 0.85
CTSB-229ENST00000533572 USP17L18D6R9N7 530 aa20.34■□□□□ 0.85
CTSB-229ENST00000533572 USP17L22D6RA61 530 aa20.34■□□□□ 0.85
CTSB-229ENST00000533572 USP17L17D6RBQ6 530 aa20.34■□□□□ 0.85
CTSB-229ENST00000533572 USP17L19D6RCP7 530 aa20.34■□□□□ 0.85
CTSB-229ENST00000533572 USP17L20D6RJB6 530 aa20.34■□□□□ 0.85
CTSB-229ENST00000533572 SMIM22K7EJ46 135 aa20.34■□□□□ 0.85
CTSB-229ENST00000533572 ZKSCAN1P17029 563 aaPredicted RBP20.34■□□□□ 0.85
CTSB-229ENST00000533572 ATP2B2Q01814 1243 aa20.34■□□□□ 0.85
CTSB-229ENST00000533572 USP17L24Q0WX57 530 aa20.34■□□□□ 0.85
CTSB-229ENST00000533572 NECTIN1Q15223 517 aa20.34■□□□□ 0.85
CTSB-229ENST00000533572 SLC9C1Q4G0N8 1177 aa20.34■□□□□ 0.85
CTSB-229ENST00000533572 NBPF11Q86T75 865 aa20.34■□□□□ 0.85
CTSB-229ENST00000533572 USP26Q9BXU7 913 aa20.34■□□□□ 0.85
CTSB-229ENST00000533572 SRRDQ9UH36 339 aa20.34■□□□□ 0.85
CTSB-229ENST00000533572 MYPNQ86TC9 1320 aa20.33■□□□□ 0.85
CTSB-229ENST00000533572 TNPO2O14787 897 aaKnown RBP20.33■□□□□ 0.85
CTSB-229ENST00000533572 VCAM1P19320 739 aa20.33■□□□□ 0.85
CTSB-229ENST00000533572 SOX10P56693 466 aa20.33■□□□□ 0.85
CTSB-229ENST00000533572 HERVK_113P62684 666 aa20.33■□□□□ 0.85
CTSB-229ENST00000533572 RAET1EQ8TD07 263 aa20.33■□□□□ 0.85
CTSB-229ENST00000533572 P2RX7Q99572 595 aaKnown RBP20.33■□□□□ 0.85
CTSB-229ENST00000533572 CNNM2Q9H8M5 875 aa20.33■□□□□ 0.85
CTSB-229ENST00000533572 ZSWIM8A7E2V4 1837 aa20.32■□□□□ 0.84
CTSB-229ENST00000533572 HSPA4P34932 840 aa20.32■□□□□ 0.84
CTSB-229ENST00000533572 KRT32Q14532 448 aa20.32■□□□□ 0.84
CTSB-229ENST00000533572 AKNAD1Q5T1N1 836 aa20.32■□□□□ 0.84
CTSB-229ENST00000533572 MFSD6Q6ZSS7 791 aa20.32■□□□□ 0.84
CTSB-229ENST00000533572 ZNF444Q8N0Y2 327 aaPredicted RBP20.32■□□□□ 0.84
CTSB-229ENST00000533572 STAG1Q8WVM7 1258 aa20.32■□□□□ 0.84
CTSB-229ENST00000533572 COA7Q96BR5 231 aa20.32■□□□□ 0.84
CTSB-229ENST00000533572 BACH2Q9BYV9 841 aa20.32■□□□□ 0.84
CTSB-229ENST00000533572 KANSL2Q9H9L4 492 aa20.32■□□□□ 0.84
CTSB-229ENST00000533572 CYP21A2P08686 494 aa20.31■□□□□ 0.84
CTSB-229ENST00000533572 FGRP09769 529 aa20.31■□□□□ 0.84
CTSB-229ENST00000533572 CTGFP29279 349 aa20.31■□□□□ 0.84
CTSB-229ENST00000533572 TRDNQ13061 729 aa20.31■□□□□ 0.84
CTSB-229ENST00000533572 CREB3L3Q68CJ9 461 aa20.31■□□□□ 0.84
CTSB-229ENST00000533572 CLEC10AQ8IUN9 316 aa20.31■□□□□ 0.84
CTSB-229ENST00000533572 CCAR1Q8IX12 1150 aaKnown RBP20.31■□□□□ 0.84
CTSB-229ENST00000533572 PAGR1Q9BTK6 254 aa20.31■□□□□ 0.84
CTSB-229ENST00000533572 RPAP3Q9H6T3 665 aaPredicted RBP20.31■□□□□ 0.84
CTSB-229ENST00000533572 A0A1W2PRG0 241 aa20.3■□□□□ 0.84
CTSB-229ENST00000533572 SLC27A2O14975 620 aa20.3■□□□□ 0.84
CTSB-229ENST00000533572 RASA1P20936 1047 aa20.3■□□□□ 0.84
CTSB-229ENST00000533572 HAND2P61296 217 aa20.3■□□□□ 0.84
CTSB-229ENST00000533572 TSGA10IPQ3SY00 556 aa20.3■□□□□ 0.84
CTSB-229ENST00000533572 GPRC5AQ8NFJ5 357 aa20.3■□□□□ 0.84
CTSB-229ENST00000533572 LPAR1Q92633 364 aa20.3■□□□□ 0.84
CTSB-229ENST00000533572 ARMC5Q96C12 935 aa20.3■□□□□ 0.84
CTSB-229ENST00000533572 KRT23Q9C075 422 aa20.3■□□□□ 0.84
CTSB-229ENST00000533572 TANGO6Q9C0B7 1094 aa20.3■□□□□ 0.84
CTSB-229ENST00000533572 MORF4L1Q9UBU8 362 aa20.3■□□□□ 0.84
CTSB-229ENST00000533572 TMX2Q9Y320 296 aa20.3■□□□□ 0.84
CTSB-229ENST00000533572 ORC4O43929 436 aa20.29■□□□□ 0.84
CTSB-229ENST00000533572 RAD21O60216 631 aa20.29■□□□□ 0.84
CTSB-229ENST00000533572 PRKCZQ05513 592 aa20.29■□□□□ 0.84
CTSB-229ENST00000533572 CTDSPL2Q05D32 466 aa20.29■□□□□ 0.84
CTSB-229ENST00000533572 CATSPERGQ6ZRH7 1159 aa20.29■□□□□ 0.84
CTSB-229ENST00000533572 KCNB2Q92953 911 aa20.29■□□□□ 0.84
CTSB-229ENST00000533572 CWC22Q9HCG8 908 aaKnown RBP20.29■□□□□ 0.84
CTSB-229ENST00000533572 MGAMO43451 1857 aa20.28■□□□□ 0.84
CTSB-229ENST00000533572 LAMA4Q16363 1823 aa20.28■□□□□ 0.84
CTSB-229ENST00000533572 PRDM1O75626 825 aa20.28■□□□□ 0.84
CTSB-229ENST00000533572 EEF2P13639 858 aaKnown RBP20.28■□□□□ 0.84
CTSB-229ENST00000533572 ANAPC15P60006 121 aa20.28■□□□□ 0.84
CTSB-229ENST00000533572 PPP4R3BQ5MIZ7 849 aa20.28■□□□□ 0.84
CTSB-229ENST00000533572 ESR2Q92731 530 aa20.28■□□□□ 0.84
CTSB-229ENST00000533572 TMEM106CQ9BVX2 250 aa20.28■□□□□ 0.84
CTSB-229ENST00000533572 VCPKMTQ9H867 229 aa20.28■□□□□ 0.84
CTSB-229ENST00000533572 GOPCQ9HD26 462 aa20.28■□□□□ 0.84
CTSB-229ENST00000533572 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.28■□□□□ 0.846e-6■■□□□ 13.9
CTSB-229ENST00000533572 SEC24BO95487 1268 aa20.27■□□□□ 0.84
CTSB-229ENST00000533572 TSPY3P0CV98 308 aa20.27■□□□□ 0.84
CTSB-229ENST00000533572 TSPY8P0CW00 308 aa20.27■□□□□ 0.84
CTSB-229ENST00000533572 ERVK-9P63128 1117 aa20.27■□□□□ 0.84
CTSB-229ENST00000533572 ERVK-24P63145 666 aa20.27■□□□□ 0.84
CTSB-229ENST00000533572 RALYLQ86SE5 291 aaKnown RBP20.27■□□□□ 0.84
CTSB-229ENST00000533572 NCOA7Q8NI08 942 aa20.27■□□□□ 0.84
CTSB-229ENST00000533572 SH3TC2Q8TF17 1288 aa20.27■□□□□ 0.84
CTSB-229ENST00000533572 TOMM22Q9NS69 142 aa20.27■□□□□ 0.84
CTSB-229ENST00000533572 BIN2Q9UBW5 565 aaPredicted RBP20.27■□□□□ 0.84
CTSB-229ENST00000533572 RABGAP1Q9Y3P9 1069 aa20.27■□□□□ 0.84
CTSB-229ENST00000533572 WDR46O15213 610 aaKnown RBP20.26■□□□□ 0.83
CTSB-229ENST00000533572 HMGB1P09429 215 aaKnown RBP20.26■□□□□ 0.83
CTSB-229ENST00000533572 PSMA5P28066 241 aa20.26■□□□□ 0.83
CTSB-229ENST00000533572 GRK4P32298 578 aa20.26■□□□□ 0.83
CTSB-229ENST00000533572 FLT3LGP49771 235 aa20.26■□□□□ 0.83
CTSB-229ENST00000533572 CCNA1P78396 465 aa20.26■□□□□ 0.83
CTSB-229ENST00000533572 TBC1D10CQ8IV04 446 aa20.26■□□□□ 0.83
CTSB-229ENST00000533572 SPICE1Q8N0Z3 855 aa20.26■□□□□ 0.83
CTSB-229ENST00000533572 SLAIN1Q8ND83 568 aa20.26■□□□□ 0.83
CTSB-229ENST00000533572 ZNF333Q96JL9 665 aa20.26■□□□□ 0.83
CTSB-229ENST00000533572 RBPJLQ9UBG7 517 aa20.26■□□□□ 0.83
CTSB-229ENST00000533572 GABRQQ9UN88 632 aa20.26■□□□□ 0.83
CTSB-229ENST00000533572 E7EWF7 191 aa20.25■□□□□ 0.83
CTSB-229ENST00000533572 MAPK4P31152 587 aa20.25■□□□□ 0.83
CTSB-229ENST00000533572 COG2Q14746 738 aa20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms