RNA–Protein interactions for RNA: ENST00000533533.5

COPB1-210, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-210ENST00000533533 VCAM1P19320 739 aa10.52□□□□□ -0.73
COPB1-210ENST00000533533 USP5P45974 858 aa10.52□□□□□ -0.73
COPB1-210ENST00000533533 USP14P54578 494 aa10.52□□□□□ -0.73
COPB1-210ENST00000533533 RAB3GAP1Q15042 981 aa10.52□□□□□ -0.73
COPB1-210ENST00000533533 CERKLQ49MI3 558 aaPredicted RBP10.52□□□□□ -0.73
COPB1-210ENST00000533533 ANKRD45Q5TZF3 282 aa10.52□□□□□ -0.73
COPB1-210ENST00000533533 MFSD14CQ5VZR4 134 aa10.52□□□□□ -0.73
COPB1-210ENST00000533533 LBX2Q6XYB7 198 aa10.52□□□□□ -0.73
COPB1-210ENST00000533533 TTC6Q86TZ1 520 aa10.52□□□□□ -0.73
COPB1-210ENST00000533533 MAGEB6Q8N7X4 407 aa10.52□□□□□ -0.73
COPB1-210ENST00000533533 GPATCH3Q96I76 525 aa10.52□□□□□ -0.73
COPB1-210ENST00000533533 KIAA1683Q9H0B3 1180 aa10.52□□□□□ -0.73
COPB1-210ENST00000533533 RWDD1Q9H446 243 aaPredicted RBP10.52□□□□□ -0.73
COPB1-210ENST00000533533 MTMR10Q9NXD2 777 aa10.52□□□□□ -0.73
COPB1-210ENST00000533533 FLRT1Q9NZU1 646 aa10.52□□□□□ -0.73
COPB1-210ENST00000533533 STXBP5LQ9Y2K9 1186 aa10.52□□□□□ -0.73
COPB1-210ENST00000533533 ZNFX1Q9P2E3 1918 aaKnown RBP10.52□□□□□ -0.73
COPB1-210ENST00000533533 PRUNE2Q8WUY3 3088 aa10.52□□□□□ -0.73
COPB1-210ENST00000533533 MYH8P13535 1937 aa10.51□□□□□ -0.73
COPB1-210ENST00000533533 RLFQ13129 1914 aa10.51□□□□□ -0.73
COPB1-210ENST00000533533 HOXC6P09630 235 aa10.51□□□□□ -0.73
COPB1-210ENST00000533533 PTPREP23469 700 aa10.51□□□□□ -0.73
COPB1-210ENST00000533533 MDM2Q00987 491 aaPredicted RBP10.51□□□□□ -0.73
COPB1-210ENST00000533533 ABCB5Q2M3G0 1257 aa10.51□□□□□ -0.73
COPB1-210ENST00000533533 WDR78Q5VTH9 848 aa10.51□□□□□ -0.73
COPB1-210ENST00000533533 B4GALNT3Q6L9W6 998 aa10.51□□□□□ -0.73
COPB1-210ENST00000533533 TMED8Q6PL24 325 aaPredicted RBP10.51□□□□□ -0.73
COPB1-210ENST00000533533 ACER1Q8TDN7 264 aa10.51□□□□□ -0.73
COPB1-210ENST00000533533 BOLA2Q9H3K6 86 aa10.51□□□□□ -0.73
COPB1-210ENST00000533533 CABP5Q9NP86 173 aa10.51□□□□□ -0.73
COPB1-210ENST00000533533 IVNS1ABPQ9Y6Y0 642 aa10.51□□□□□ -0.73
COPB1-210ENST00000533533 SPDYE16A6NNV3 312 aaPredicted RBP10.5□□□□□ -0.73
COPB1-210ENST00000533533 GOLIM4O00461 696 aa10.5□□□□□ -0.73
COPB1-210ENST00000533533 MSCO60682 206 aa10.5□□□□□ -0.73
COPB1-210ENST00000533533 SHMT1P34896 483 aa10.5□□□□□ -0.73
COPB1-210ENST00000533533 PLCD1P51178 756 aa10.5□□□□□ -0.73
COPB1-210ENST00000533533 ATP2B2Q01814 1243 aa10.5□□□□□ -0.73
COPB1-210ENST00000533533 MAP3K12Q12852 859 aa10.5□□□□□ -0.73
COPB1-210ENST00000533533 HDAC1Q13547 482 aaPredicted RBP10.5□□□□□ -0.73
COPB1-210ENST00000533533 GRB14Q14449 540 aa10.5□□□□□ -0.73
COPB1-210ENST00000533533 PIP4P2Q8N4L2 257 aa10.5□□□□□ -0.73
COPB1-210ENST00000533533 SENP6Q9GZR1 1112 aaPredicted RBP10.5□□□□□ -0.73
COPB1-210ENST00000533533 ANTXR1Q9H6X2 564 aa10.5□□□□□ -0.73
COPB1-210ENST00000533533 BTBD7Q9P203 1132 aa10.5□□□□□ -0.73
COPB1-210ENST00000533533 DDX20Q9UHI6 824 aaKnown RBP10.5□□□□□ -0.73
COPB1-210ENST00000533533 NAV1Q8NEY1 1877 aa10.5□□□□□ -0.73
COPB1-210ENST00000533533 CDH23Q9H251 3354 aa10.5□□□□□ -0.73
COPB1-210ENST00000533533 EYSQ5T1H1 3165 aa10.5□□□□□ -0.73
COPB1-210ENST00000533533 IGHA2P01877 340 aa10.49□□□□□ -0.73
COPB1-210ENST00000533533 CENPBP07199 599 aaPredicted RBP10.49□□□□□ -0.73
COPB1-210ENST00000533533 CNGA1P29973 690 aa10.49□□□□□ -0.73
COPB1-210ENST00000533533 CYP2C19P33261 490 aa10.49□□□□□ -0.73
COPB1-210ENST00000533533 GUCY1A2P33402 732 aa10.49□□□□□ -0.73
COPB1-210ENST00000533533 TSHZ3Q63HK5 1081 aa10.49□□□□□ -0.73
COPB1-210ENST00000533533 NPLOC4Q8TAT6 608 aa10.49□□□□□ -0.73
COPB1-210ENST00000533533 LPAR1Q92633 364 aa10.49□□□□□ -0.73
COPB1-210ENST00000533533 LBHD1Q9BQE6 289 aaPredicted RBP10.49□□□□□ -0.73
COPB1-210ENST00000533533 RIOK1Q9BRS2 568 aaKnown RBP10.49□□□□□ -0.73
COPB1-210ENST00000533533 RPAP3Q9H6T3 665 aaPredicted RBP10.49□□□□□ -0.73
COPB1-210ENST00000533533 POTEB2H3BUK9 544 aa10.48□□□□□ -0.73
COPB1-210ENST00000533533 DNM1LO00429 736 aa10.48□□□□□ -0.73
COPB1-210ENST00000533533 IGHDP01880 384 aa10.48□□□□□ -0.73
COPB1-210ENST00000533533 POLR3DP05423 398 aaPredicted RBP10.48□□□□□ -0.73
COPB1-210ENST00000533533 ATP5JP18859 108 aa10.48□□□□□ -0.73
COPB1-210ENST00000533533 ATN1P54259 1190 aaPredicted RBP10.48□□□□□ -0.73
COPB1-210ENST00000533533 GABPAQ06546 454 aa10.48□□□□□ -0.73
COPB1-210ENST00000533533 SEPT2Q15019 361 aa10.48□□□□□ -0.73
COPB1-210ENST00000533533 TTF1Q15361 905 aaPredicted RBP10.48□□□□□ -0.73
COPB1-210ENST00000533533 FAM109BQ6ICB4 259 aaPredicted RBP10.48□□□□□ -0.73
COPB1-210ENST00000533533 TRPV1Q8NER1 839 aa10.48□□□□□ -0.73
COPB1-210ENST00000533533 ECHDC1Q9NTX5 307 aa10.48□□□□□ -0.73
COPB1-210ENST00000533533 PAG1Q9NWQ8 432 aa10.48□□□□□ -0.73
COPB1-210ENST00000533533 HOXC10Q9NYD6 342 aa10.48□□□□□ -0.73
COPB1-210ENST00000533533 LTBP2Q14767 1821 aa10.48□□□□□ -0.73
COPB1-210ENST00000533533 ZNF236Q9UL36 1845 aa10.48□□□□□ -0.73
COPB1-210ENST00000533533 BAZ2AQ9UIF9 1905 aaKnown RBP10.48□□□□□ -0.73
COPB1-210ENST00000533533 PARP14Q460N5 1801 aa10.47□□□□□ -0.73
COPB1-210ENST00000533533 MAGEB6P1A0A0J9YX57 407 aa10.47□□□□□ -0.73
COPB1-210ENST00000533533 A0A1W2PRG0 241 aa10.47□□□□□ -0.73
COPB1-210ENST00000533533 STRNO43815 780 aa10.47□□□□□ -0.73
COPB1-210ENST00000533533 NEFLP07196 543 aa10.47□□□□□ -0.73
COPB1-210ENST00000533533 CYBAP13498 195 aa10.47□□□□□ -0.73
COPB1-210ENST00000533533 ADORA2AP29274 412 aa10.47□□□□□ -0.73
COPB1-210ENST00000533533 FXR2P51116 673 aaKnown RBP eCLIP10.47□□□□□ -0.735e-10■■■■■ 37.3
COPB1-210ENST00000533533 COG2Q14746 738 aa10.47□□□□□ -0.73
COPB1-210ENST00000533533 OLFML2BQ68BL8 750 aa10.47□□□□□ -0.73
COPB1-210ENST00000533533 DPP9Q86TI2 863 aa10.47□□□□□ -0.73
COPB1-210ENST00000533533 OTUD7AQ8TE49 926 aaPredicted RBP10.47□□□□□ -0.73
COPB1-210ENST00000533533 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.47□□□□□ -0.73
COPB1-210ENST00000533533 MOV10L1Q9BXT6 1211 aaKnown RBP10.47□□□□□ -0.73
COPB1-210ENST00000533533 CRNKL1Q9BZJ0 848 aaKnown RBP10.47□□□□□ -0.73
COPB1-210ENST00000533533 LNPKQ9C0E8 428 aa10.47□□□□□ -0.73
COPB1-210ENST00000533533 MCM9Q9NXL9 1143 aa10.47□□□□□ -0.73
COPB1-210ENST00000533533 PRKAG2Q9UGJ0 569 aa10.47□□□□□ -0.73
COPB1-210ENST00000533533 A0A0G2JMZ2 1700 aa10.47□□□□□ -0.73
COPB1-210ENST00000533533 MPHOSPH10O00566 681 aaKnown RBP10.46□□□□□ -0.73
COPB1-210ENST00000533533 ERC2O15083 957 aa10.46□□□□□ -0.73
COPB1-210ENST00000533533 PDE6AP16499 860 aa10.46□□□□□ -0.73
COPB1-210ENST00000533533 ERCC3P19447 782 aa10.46□□□□□ -0.73
COPB1-210ENST00000533533 RTP1P59025 263 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms