RNA–Protein interactions for RNA: ENST00000533499.1

NXF1-216, Transcript of nuclear RNA export factor 1, humanhuman

TSL 5

Gene NXF1, Length 936 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-216ENST00000533499 ENAHQ8N8S7 591 aaPredicted RBP20.5■□□□□ 0.87
NXF1-216ENST00000533499 TMEM47Q9BQJ4 181 aa20.5■□□□□ 0.87
NXF1-216ENST00000533499 GPHNQ9NQX3 736 aaPredicted RBP20.5■□□□□ 0.87
NXF1-216ENST00000533499 NAP1L2Q9ULW6 460 aaPredicted RBP20.5■□□□□ 0.87
NXF1-216ENST00000533499 KCNH4Q9UQ05 1017 aa20.5■□□□□ 0.87
NXF1-216ENST00000533499 TMX2Q9Y320 296 aa20.5■□□□□ 0.87
NXF1-216ENST00000533499 CYP46A1Q9Y6A2 500 aa20.5■□□□□ 0.87
NXF1-216ENST00000533499 TOP1P11387 765 aaKnown RBP20.49■□□□□ 0.87
NXF1-216ENST00000533499 SAMD1Q6SPF0 538 aaPredicted RBP20.49■□□□□ 0.87
NXF1-216ENST00000533499 KIAA1683Q9H0B3 1180 aa20.49■□□□□ 0.87
NXF1-216ENST00000533499 A0A0G2JLL6 359 aaPredicted RBP20.48■□□□□ 0.87
NXF1-216ENST00000533499 RPS6KB1P23443 525 aa20.48■□□□□ 0.87
NXF1-216ENST00000533499 SREBF2Q12772 1141 aa20.48■□□□□ 0.87
NXF1-216ENST00000533499 FASTKD5Q7L8L6 764 aaKnown RBP20.48■□□□□ 0.87
NXF1-216ENST00000533499 PRRT2Q7Z6L0 340 aaPredicted RBP20.48■□□□□ 0.87
NXF1-216ENST00000533499 DGKHQ86XP1 1220 aa20.48■□□□□ 0.87
NXF1-216ENST00000533499 BRI3BPQ8WY22 251 aa20.48■□□□□ 0.87
NXF1-216ENST00000533499 TMEM87BQ96K49 555 aa20.48■□□□□ 0.87
NXF1-216ENST00000533499 TTC14Q96N46 770 aa20.48■□□□□ 0.87
NXF1-216ENST00000533499 EMILIN3Q9NT22 766 aa20.48■□□□□ 0.87
NXF1-216ENST00000533499 CCDC69A6NI79 296 aa20.47■□□□□ 0.87
NXF1-216ENST00000533499 F5H6K3 240 aa20.47■□□□□ 0.87
NXF1-216ENST00000533499 KLRC3Q07444 240 aa20.47■□□□□ 0.87
NXF1-216ENST00000533499 SLFN13Q68D06 897 aa20.47■□□□□ 0.87
NXF1-216ENST00000533499 RCSD1Q6JBY9 416 aa20.47■□□□□ 0.87
NXF1-216ENST00000533499 Q6ZUG5 572 aa20.47■□□□□ 0.87
NXF1-216ENST00000533499 RUFY3Q7L099 469 aa20.47■□□□□ 0.87
NXF1-216ENST00000533499 MS4A4AQ96JQ5 239 aa20.47■□□□□ 0.87
NXF1-216ENST00000533499 VCPKMTQ9H867 229 aa20.47■□□□□ 0.87
NXF1-216ENST00000533499 SENP2Q9HC62 589 aa20.47■□□□□ 0.87
NXF1-216ENST00000533499 ZSWIM6Q9HCJ5 1215 aa20.47■□□□□ 0.87
NXF1-216ENST00000533499 SH2B2O14492 632 aaPredicted RBP20.46■□□□□ 0.87
NXF1-216ENST00000533499 EXOSC10Q01780 885 aaKnown RBP20.46■□□□□ 0.87
NXF1-216ENST00000533499 SEC23AQ15436 765 aa20.46■□□□□ 0.87
NXF1-216ENST00000533499 CCDC96Q2M329 555 aa20.46■□□□□ 0.87
NXF1-216ENST00000533499 PNMA1Q8ND90 353 aa20.46■□□□□ 0.87
NXF1-216ENST00000533499 MKL1Q969V6 931 aa20.46■□□□□ 0.87
NXF1-216ENST00000533499 NUP88Q99567 741 aaPredicted RBP20.46■□□□□ 0.87
NXF1-216ENST00000533499 TM6SF1Q9BZW5 370 aa20.46■□□□□ 0.87
NXF1-216ENST00000533499 TANGO6Q9C0B7 1094 aa20.46■□□□□ 0.87
NXF1-216ENST00000533499 PDRG1Q9NUG6 133 aa20.46■□□□□ 0.87
NXF1-216ENST00000533499 PTPRFP10586 1907 aa20.46■□□□□ 0.87
NXF1-216ENST00000533499 NDUFB10O96000 172 aa20.45■□□□□ 0.86
NXF1-216ENST00000533499 RBM25P49756 843 aaKnown RBP20.45■□□□□ 0.86
NXF1-216ENST00000533499 KIAA1755Q5JYT7 1200 aa20.45■□□□□ 0.86
NXF1-216ENST00000533499 TREML2Q5T2D2 321 aa20.45■□□□□ 0.86
NXF1-216ENST00000533499 RAB11FIP4Q86YS3 637 aa20.45■□□□□ 0.86
NXF1-216ENST00000533499 IGDCC4Q8TDY8 1250 aa20.45■□□□□ 0.86
NXF1-216ENST00000533499 NUP133Q8WUM0 1156 aa20.45■□□□□ 0.86
NXF1-216ENST00000533499 TBC1D32Q96NH3 1257 aa20.45■□□□□ 0.86
NXF1-216ENST00000533499 LY9Q9HBG7 655 aa20.45■□□□□ 0.86
NXF1-216ENST00000533499 BTBD19C9JJ37 291 aa20.44■□□□□ 0.86
NXF1-216ENST00000533499 VCAM1P19320 739 aa20.44■□□□□ 0.86
NXF1-216ENST00000533499 MAP2K2P36507 400 aa20.44■□□□□ 0.86
NXF1-216ENST00000533499 NEK4P51957 841 aa20.44■□□□□ 0.86
NXF1-216ENST00000533499 INHBEP58166 350 aa20.44■□□□□ 0.86
NXF1-216ENST00000533499 IKQ13123 557 aaPredicted RBP20.44■□□□□ 0.86
NXF1-216ENST00000533499 SH3D19Q5HYK7 790 aa20.44■□□□□ 0.86
NXF1-216ENST00000533499 FAM83BQ5T0W9 1011 aa20.44■□□□□ 0.86
NXF1-216ENST00000533499 OTUD7BQ6GQQ9 843 aa20.44■□□□□ 0.86
NXF1-216ENST00000533499 SYNE3Q6ZMZ3 975 aa20.44■□□□□ 0.86
NXF1-216ENST00000533499 NOL8Q76FK4 1167 aaKnown RBP20.44■□□□□ 0.86
NXF1-216ENST00000533499 RASGRP2Q7LDG7 609 aa20.44■□□□□ 0.86
NXF1-216ENST00000533499 CATIPQ7Z7H3 387 aa20.44■□□□□ 0.86
NXF1-216ENST00000533499 PROCA1Q8NCQ7 364 aaPredicted RBP20.44■□□□□ 0.86
NXF1-216ENST00000533499 BRF1Q92994 677 aa20.44■□□□□ 0.86
NXF1-216ENST00000533499 RPAP3Q9H6T3 665 aaPredicted RBP20.44■□□□□ 0.86
NXF1-216ENST00000533499 WDR19Q8NEZ3 1342 aa20.44■□□□□ 0.86
NXF1-216ENST00000533499 PDHXO00330 501 aa20.43■□□□□ 0.86
NXF1-216ENST00000533499 SLC1A4P43007 532 aa20.43■□□□□ 0.86
NXF1-216ENST00000533499 IRX3P78415 501 aaPredicted RBP20.43■□□□□ 0.86
NXF1-216ENST00000533499 PABPC4Q13310 644 aaKnown RBP eCLIP20.43■□□□□ 0.86
NXF1-216ENST00000533499 FAM43AQ8N2R8 423 aa20.43■□□□□ 0.86
NXF1-216ENST00000533499 TMTC2Q8N394 836 aa20.43■□□□□ 0.86
NXF1-216ENST00000533499 GMCL1P1Q8NEA9 526 aa20.43■□□□□ 0.86
NXF1-216ENST00000533499 ANKS1AQ92625 1134 aa20.43■□□□□ 0.86
NXF1-216ENST00000533499 LPAR1Q92633 364 aa20.43■□□□□ 0.86
NXF1-216ENST00000533499 PTPN18Q99952 460 aa20.43■□□□□ 0.86
NXF1-216ENST00000533499 LARP6Q9BRS8 491 aaKnown RBP20.43■□□□□ 0.86
NXF1-216ENST00000533499 MYL10Q9BUA6 226 aa20.43■□□□□ 0.86
NXF1-216ENST00000533499 GPCPD1Q9NPB8 672 aa20.43■□□□□ 0.86
NXF1-216ENST00000533499 AGTPBP1Q9UPW5 1226 aa20.43■□□□□ 0.86
NXF1-216ENST00000533499 SLC12A7Q9Y666 1083 aa20.43■□□□□ 0.86
NXF1-216ENST00000533499 FRMPD2Q68DX3 1309 aaPredicted RBP20.43■□□□□ 0.86
NXF1-216ENST00000533499 IGF2BP3O00425 579 aaKnown RBP eCLIP20.42■□□□□ 0.86
NXF1-216ENST00000533499 OSBPP22059 807 aa20.42■□□□□ 0.86
NXF1-216ENST00000533499 APOBRQ0VD83 1088 aa20.42■□□□□ 0.86
NXF1-216ENST00000533499 MOGSQ13724 837 aa20.42■□□□□ 0.86
NXF1-216ENST00000533499 KCTD1Q719H9 257 aa20.42■□□□□ 0.86
NXF1-216ENST00000533499 IFNL1Q8IU54 200 aa20.42■□□□□ 0.86
NXF1-216ENST00000533499 C12orf42Q96LP6 360 aa20.42■□□□□ 0.86
NXF1-216ENST00000533499 MTA3Q9BTC8 594 aa20.42■□□□□ 0.86
NXF1-216ENST00000533499 KLF18A0A0U1RQI7 1052 aa20.41■□□□□ 0.86
NXF1-216ENST00000533499 USP17L15C9J2P7 530 aa20.41■□□□□ 0.86
NXF1-216ENST00000533499 USP17L13C9JLJ4 530 aa20.41■□□□□ 0.86
NXF1-216ENST00000533499 USP17L11C9JVI0 530 aa20.41■□□□□ 0.86
NXF1-216ENST00000533499 USP17L18D6R9N7 530 aa20.41■□□□□ 0.86
NXF1-216ENST00000533499 USP17L22D6RA61 530 aa20.41■□□□□ 0.86
NXF1-216ENST00000533499 USP17L17D6RBQ6 530 aa20.41■□□□□ 0.86
NXF1-216ENST00000533499 USP17L19D6RCP7 530 aa20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms