RNA–Protein interactions for RNA: ENST00000533464.5

PHRF1-205, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-205ENST00000533464 SMIM23A6NLE4 172 aa19.56■□□□□ 0.72
PHRF1-205ENST00000533464 PTGDRQ13258 359 aa19.56■□□□□ 0.72
PHRF1-205ENST00000533464 NECTIN1Q15223 517 aa19.56■□□□□ 0.72
PHRF1-205ENST00000533464 CCDC25Q86WR0 208 aa19.56■□□□□ 0.72
PHRF1-205ENST00000533464 SUPT20HQ8NEM7 779 aa19.56■□□□□ 0.72
PHRF1-205ENST00000533464 PIGBQ92521 554 aa19.56■□□□□ 0.72
PHRF1-205ENST00000533464 CARMIL3Q8ND23 1372 aa19.56■□□□□ 0.72
PHRF1-205ENST00000533464 PPIP5K2O43314 1243 aa19.56■□□□□ 0.72
PHRF1-205ENST00000533464 SLC39A14Q15043 492 aa19.56■□□□□ 0.72
PHRF1-205ENST00000533464 NOX5Q96PH1 765 aa19.56■□□□□ 0.72
PHRF1-205ENST00000533464 ZEB2O60315 1214 aa19.55■□□□□ 0.72
PHRF1-205ENST00000533464 STK24Q9Y6E0 443 aa19.55■□□□□ 0.72
PHRF1-205ENST00000533464 CYP27B1O15528 508 aa19.55■□□□□ 0.72
PHRF1-205ENST00000533464 WDR44Q5JSH3 913 aa19.55■□□□□ 0.72
PHRF1-205ENST00000533464 KIAA0825Q8IV33 1275 aa19.55■□□□□ 0.72
PHRF1-205ENST00000533464 NT5C3AQ9H0P0 336 aa19.55■□□□□ 0.72
PHRF1-205ENST00000533464 GCNT3O95395 438 aa19.55■□□□□ 0.72
PHRF1-205ENST00000533464 MRPL44Q9H9J2 332 aaKnown RBP19.55■□□□□ 0.72
PHRF1-205ENST00000533464 MTRF1LQ9UGC7 380 aaKnown RBP19.55■□□□□ 0.72
PHRF1-205ENST00000533464 PCP11498 1178 aaKnown RBP19.55■□□□□ 0.72
PHRF1-205ENST00000533464 PPP1R7Q15435 360 aa19.55■□□□□ 0.72
PHRF1-205ENST00000533464 DOK7Q18PE1 504 aa19.55■□□□□ 0.72
PHRF1-205ENST00000533464 FNBP4Q8N3X1 1017 aaPredicted RBP19.55■□□□□ 0.72
PHRF1-205ENST00000533464 A2ML1A8K2U0 1454 aa19.54■□□□□ 0.72
PHRF1-205ENST00000533464 SPOPO43791 374 aa19.54■□□□□ 0.72
PHRF1-205ENST00000533464 KCNQ4P56696 695 aa19.54■□□□□ 0.72
PHRF1-205ENST00000533464 PPP1R14CQ8TAE6 165 aa19.54■□□□□ 0.72
PHRF1-205ENST00000533464 MRFAP1L1Q96HT8 127 aa19.54■□□□□ 0.72
PHRF1-205ENST00000533464 PSTPIP2Q9H939 334 aa19.54■□□□□ 0.72
PHRF1-205ENST00000533464 TMOD4Q9NZQ9 345 aa19.54■□□□□ 0.72
PHRF1-205ENST00000533464 PRKAB2O43741 272 aa19.54■□□□□ 0.72
PHRF1-205ENST00000533464 EXOC3O60645 756 aa19.54■□□□□ 0.72
PHRF1-205ENST00000533464 IGKV5-2P06315 115 aa19.54■□□□□ 0.72
PHRF1-205ENST00000533464 CALCOCO2Q13137 446 aa19.54■□□□□ 0.72
PHRF1-205ENST00000533464 UTP14CQ5TAP6 766 aaKnown RBP19.54■□□□□ 0.72
PHRF1-205ENST00000533464 C8orf74Q6P047 294 aa19.54■□□□□ 0.72
PHRF1-205ENST00000533464 PCDHA5Q9Y5H7 936 aa19.54■□□□□ 0.72
PHRF1-205ENST00000533464 NEK8Q86SG6 692 aa19.54■□□□□ 0.72
PHRF1-205ENST00000533464 PSMB7Q99436 277 aa19.54■□□□□ 0.72
PHRF1-205ENST00000533464 PDE6BP35913 854 aa19.54■□□□□ 0.72
PHRF1-205ENST00000533464 EPHA10Q5JZY3 1008 aa19.54■□□□□ 0.72
PHRF1-205ENST00000533464 MSL1Q68DK7 614 aa19.54■□□□□ 0.72
PHRF1-205ENST00000533464 TRIML1Q8N9V2 468 aa19.54■□□□□ 0.72
PHRF1-205ENST00000533464 FTOQ9C0B1 505 aaKnown RBP eCLIP19.54■□□□□ 0.72
PHRF1-205ENST00000533464 IQCGQ9H095 443 aaKnown RBP19.54■□□□□ 0.72
PHRF1-205ENST00000533464 NLRC4Q9NPP4 1024 aa19.54■□□□□ 0.72
PHRF1-205ENST00000533464 KIF4AO95239 1232 aa19.53■□□□□ 0.72
PHRF1-205ENST00000533464 KLHL30Q0D2K2 578 aa19.53■□□□□ 0.72
PHRF1-205ENST00000533464 STMN4Q9H169 189 aaPredicted RBP19.53■□□□□ 0.72
PHRF1-205ENST00000533464 ARFGAP2Q8N6H7 521 aa19.53■□□□□ 0.72
PHRF1-205ENST00000533464 KIFC2Q96AC6 838 aa19.53■□□□□ 0.72
PHRF1-205ENST00000533464 IFT74Q96LB3 600 aa19.53■□□□□ 0.72
PHRF1-205ENST00000533464 SELENOSQ9BQE4 189 aa19.53■□□□□ 0.72
PHRF1-205ENST00000533464 KCNJ18B7U540 433 aa19.53■□□□□ 0.72
PHRF1-205ENST00000533464 H7C1W4 665 aa19.53■□□□□ 0.72
PHRF1-205ENST00000533464 OR52Z1P0C646 297 aa19.53■□□□□ 0.72
PHRF1-205ENST00000533464 DYNLL1P63167 89 aaKnown RBP19.53■□□□□ 0.72
PHRF1-205ENST00000533464 KCNJ12Q14500 433 aa19.53■□□□□ 0.72
PHRF1-205ENST00000533464 SEL1L2Q5TEA6 688 aa19.53■□□□□ 0.72
PHRF1-205ENST00000533464 RRAGAQ7L523 313 aa19.53■□□□□ 0.72
PHRF1-205ENST00000533464 CCDC26Q8TAB7 109 aa19.53■□□□□ 0.72
PHRF1-205ENST00000533464 KIFAP3Q92845 792 aa19.53■□□□□ 0.72
PHRF1-205ENST00000533464 GIMAP7Q8NHV1 300 aa19.53■□□□□ 0.72
PHRF1-205ENST00000533464 SYMPKQ92797 1274 aaKnown RBP19.53■□□□□ 0.72
PHRF1-205ENST00000533464 PCDHA12Q9UN75 941 aa19.53■□□□□ 0.72
PHRF1-205ENST00000533464 AXIN2Q9Y2T1 843 aa19.53■□□□□ 0.72
PHRF1-205ENST00000533464 TPH2Q8IWU9 490 aa19.52■□□□□ 0.72
PHRF1-205ENST00000533464 ZNF500O60304 480 aaPredicted RBP19.52■□□□□ 0.72
PHRF1-205ENST00000533464 MORC3Q14149 939 aa19.52■□□□□ 0.72
PHRF1-205ENST00000533464 NBPF11Q86T75 865 aa19.52■□□□□ 0.72
PHRF1-205ENST00000533464 MSANTD4Q8NCY6 345 aa19.52■□□□□ 0.72
PHRF1-205ENST00000533464 OR8K1Q8NGG5 319 aa19.52■□□□□ 0.72
PHRF1-205ENST00000533464 TSPOAP1O95153 1857 aa19.52■□□□□ 0.72
PHRF1-205ENST00000533464 ERFEQ4G0M1 354 aa19.52■□□□□ 0.72
PHRF1-205ENST00000533464 POLR3EQ9NVU0 708 aa19.52■□□□□ 0.72
PHRF1-205ENST00000533464 EXOC7Q9UPT5 735 aa19.52■□□□□ 0.72
PHRF1-205ENST00000533464 SEMA3EO15041 775 aa19.52■□□□□ 0.71
PHRF1-205ENST00000533464 DESI2Q9BSY9 194 aa19.52■□□□□ 0.71
PHRF1-205ENST00000533464 RNF26Q9BY78 433 aaPredicted RBP19.52■□□□□ 0.71
PHRF1-205ENST00000533464 NSRP1Q9H0G5 558 aaKnown RBP19.52■□□□□ 0.71
PHRF1-205ENST00000533464 ERVV-1B6SEH8 477 aa19.51■□□□□ 0.71
PHRF1-205ENST00000533464 TYW1BQ6NUM6 668 aa19.51■□□□□ 0.71
PHRF1-205ENST00000533464 LCORLQ8N3X6 602 aa19.51■□□□□ 0.71
PHRF1-205ENST00000533464 LRRC8AQ8IWT6 810 aa19.51■□□□□ 0.71
PHRF1-205ENST00000533464 VTI1AQ96AJ9 217 aa19.51■□□□□ 0.71
PHRF1-205ENST00000533464 ZBED4O75132 1171 aa19.51■□□□□ 0.71
PHRF1-205ENST00000533464 GRM1Q13255 1194 aa19.51■□□□□ 0.71
PHRF1-205ENST00000533464 GALNT17Q6IS24 598 aa19.51■□□□□ 0.71
PHRF1-205ENST00000533464 C2CD5Q86YS7 1000 aa19.51■□□□□ 0.71
PHRF1-205ENST00000533464 TTLL11Q8NHH1 800 aa19.51■□□□□ 0.71
PHRF1-205ENST00000533464 FAM76AQ8TAV0 307 aa19.51■□□□□ 0.71
PHRF1-205ENST00000533464 UBLCP1Q8WVY7 318 aaPredicted RBP19.51■□□□□ 0.71
PHRF1-205ENST00000533464 CCDC114Q96M63 670 aa19.51■□□□□ 0.71
PHRF1-205ENST00000533464 ZMYND15Q9H091 742 aa19.51■□□□□ 0.71
PHRF1-205ENST00000533464 GTPBP6O43824 516 aaPredicted RBP19.51■□□□□ 0.71
PHRF1-205ENST00000533464 CCDC51Q96ER9 411 aa19.51■□□□□ 0.71
PHRF1-205ENST00000533464 FOXP1Q9H334 677 aaPredicted RBP19.51■□□□□ 0.71
PHRF1-205ENST00000533464 EBAG9O00559 213 aa19.5■□□□□ 0.71
PHRF1-205ENST00000533464 DKC1O60832 514 aaKnown RBP eCLIP19.5■□□□□ 0.71
PHRF1-205ENST00000533464 PRR16Q569H4 304 aa19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms