RNA–Protein interactions for RNA: ENST00000533455.5

CTSB-228, Transcript of cathepsin B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSB, Length 2,009 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-228ENST00000533455 BCL9O00512 1426 aa18.84■□□□□ 0.61
CTSB-228ENST00000533455 IRX5P78411 483 aaPredicted RBP18.84■□□□□ 0.61
CTSB-228ENST00000533455 ZNF569Q5MCW4 686 aa18.84■□□□□ 0.61
CTSB-228ENST00000533455 BEND6Q5SZJ8 279 aaPredicted RBP18.84■□□□□ 0.61
CTSB-228ENST00000533455 CPLX3Q8WVH0 158 aa18.84■□□□□ 0.61
CTSB-228ENST00000533455 ATRIPQ8WXE1 791 aa18.84■□□□□ 0.61
CTSB-228ENST00000533455 MYO1AQ9UBC5 1043 aa18.84■□□□□ 0.61
CTSB-228ENST00000533455 CTAGE9A4FU28 777 aa18.83■□□□□ 0.61
CTSB-228ENST00000533455 LRRC10BA6NIK2 292 aa18.83■□□□□ 0.61
CTSB-228ENST00000533455 H3BQF6 201 aa18.83■□□□□ 0.61
CTSB-228ENST00000533455 FXR1P51114 621 aaKnown RBP eCLIP18.83■□□□□ 0.61
CTSB-228ENST00000533455 TRIM14Q14142 442 aa18.83■□□□□ 0.61
CTSB-228ENST00000533455 RBM28Q9NW13 759 aaKnown RBP18.83■□□□□ 0.61
CTSB-228ENST00000533455 CICQ96RK0 1608 aaPredicted RBP18.83■□□□□ 0.6
CTSB-228ENST00000533455 CASP1P29466 404 aa18.83■□□□□ 0.6
CTSB-228ENST00000533455 IL6STP40189 918 aaPredicted RBP18.83■□□□□ 0.6
CTSB-228ENST00000533455 ATP2C1P98194 919 aaPredicted RBP18.83■□□□□ 0.6
CTSB-228ENST00000533455 SPAG1Q07617 926 aa18.83■□□□□ 0.6
CTSB-228ENST00000533455 E2F4Q16254 413 aa18.83■□□□□ 0.6
CTSB-228ENST00000533455 WHAMMP3Q1A5X7 153 aa18.83■□□□□ 0.6
CTSB-228ENST00000533455 CTNND2Q9UQB3 1225 aa18.83■□□□□ 0.6
CTSB-228ENST00000533455 XDHP47989 1333 aa18.82■□□□□ 0.6
CTSB-228ENST00000533455 ERLIN1O75477 346 aa18.82■□□□□ 0.6
CTSB-228ENST00000533455 KIF4BQ2VIQ3 1234 aa18.82■□□□□ 0.6
CTSB-228ENST00000533455 HDXQ7Z353 690 aa18.82■□□□□ 0.6
CTSB-228ENST00000533455 DZIP3Q86Y13 1208 aaKnown RBP18.82■□□□□ 0.6
CTSB-228ENST00000533455 SMYD4Q8IYR2 804 aaPredicted RBP18.82■□□□□ 0.6
CTSB-228ENST00000533455 SLC35F6Q8N357 371 aa18.82■□□□□ 0.6
CTSB-228ENST00000533455 ENAHQ8N8S7 591 aaPredicted RBP18.82■□□□□ 0.6
CTSB-228ENST00000533455 MIGA1Q8NAN2 632 aa18.82■□□□□ 0.6
CTSB-228ENST00000533455 NAPGQ99747 312 aaPredicted RBP18.82■□□□□ 0.6
CTSB-228ENST00000533455 PYM1Q9BRP8 204 aaKnown RBP18.82■□□□□ 0.6
CTSB-228ENST00000533455 BRMS1Q9HCU9 246 aa18.82■□□□□ 0.6
CTSB-228ENST00000533455 PUF60Q9UHX1 559 aaKnown RBP18.82■□□□□ 0.6
CTSB-228ENST00000533455 RWDD2AQ9UIY3 292 aa18.82■□□□□ 0.6
CTSB-228ENST00000533455 CACNA1SQ13698 1873 aa18.82■□□□□ 0.6
CTSB-228ENST00000533455 RREB1Q92766 1687 aa18.82■□□□□ 0.6
CTSB-228ENST00000533455 A0A1B0GUL6 1792 aa18.81■□□□□ 0.6
CTSB-228ENST00000533455 SNAP23O00161 211 aa18.81■□□□□ 0.6
CTSB-228ENST00000533455 WNT7AO00755 349 aa18.81■□□□□ 0.6
CTSB-228ENST00000533455 BCAMP50895 628 aa18.81■□□□□ 0.6
CTSB-228ENST00000533455 ERVK-24P63145 666 aa18.81■□□□□ 0.6
CTSB-228ENST00000533455 KRT31Q15323 416 aa18.81■□□□□ 0.6
CTSB-228ENST00000533455 NPY5RQ15761 445 aa18.81■□□□□ 0.6
CTSB-228ENST00000533455 TTC38Q5R3I4 469 aa18.81■□□□□ 0.6
CTSB-228ENST00000533455 PNKPQ96T60 521 aa18.81■□□□□ 0.6
CTSB-228ENST00000533455 ZSWIM4Q9H7M6 989 aa18.81■□□□□ 0.6
CTSB-228ENST00000533455 BAZ2AQ9UIF9 1905 aaKnown RBP18.81■□□□□ 0.6
CTSB-228ENST00000533455 ARHGAP25P42331 645 aa18.81■□□□□ 0.6
CTSB-228ENST00000533455 EVA1CP58658 441 aa18.81■□□□□ 0.6
CTSB-228ENST00000533455 ACRBPQ8NEB7 543 aa18.81■□□□□ 0.6
CTSB-228ENST00000533455 ZSCAN10Q96SZ4 725 aaPredicted RBP18.81■□□□□ 0.6
CTSB-228ENST00000533455 ABHD10Q9NUJ1 306 aa18.81■□□□□ 0.6
CTSB-228ENST00000533455 LRP2BPQ9P2M1 347 aa18.81■□□□□ 0.6
CTSB-228ENST00000533455 GTPBP6O43824 516 aaPredicted RBP18.8■□□□□ 0.6
CTSB-228ENST00000533455 TUBBP07437 444 aa18.8■□□□□ 0.6
CTSB-228ENST00000533455 CALM1P0DP23 149 aa18.8■□□□□ 0.6
CTSB-228ENST00000533455 CALM2P0DP24 149 aa18.8■□□□□ 0.6
CTSB-228ENST00000533455 CALM3P0DP25 149 aa18.8■□□□□ 0.6
CTSB-228ENST00000533455 CYP7A1P22680 504 aa18.8■□□□□ 0.6
CTSB-228ENST00000533455 PDXDC2PQ6P474 469 aa18.8■□□□□ 0.6
CTSB-228ENST00000533455 CYP26C1Q6V0L0 522 aa18.8■□□□□ 0.6
CTSB-228ENST00000533455 IQUBQ8NA54 791 aa18.8■□□□□ 0.6
CTSB-228ENST00000533455 TMEM51Q9NW97 253 aa18.8■□□□□ 0.6
CTSB-228ENST00000533455 ADAM21Q9UKJ8 722 aa18.8■□□□□ 0.6
CTSB-228ENST00000533455 PRDM1O75626 825 aa18.79■□□□□ 0.6
CTSB-228ENST00000533455 PLEKHA8P1O95397 391 aa18.79■□□□□ 0.6
CTSB-228ENST00000533455 COPB1P53618 953 aaKnown RBP18.79■□□□□ 0.6
CTSB-228ENST00000533455 PIP4K2BP78356 416 aa18.79■□□□□ 0.6
CTSB-228ENST00000533455 SLC20A2Q08357 652 aa18.79■□□□□ 0.6
CTSB-228ENST00000533455 CATIPQ7Z7H3 387 aa18.79■□□□□ 0.6
CTSB-228ENST00000533455 TSPYL1Q9H0U9 437 aa18.79■□□□□ 0.6
CTSB-228ENST00000533455 L1RE1Q9UN81 338 aa18.79■□□□□ 0.6
CTSB-228ENST00000533455 MAGEB6P1A0A0J9YX57 407 aa18.79■□□□□ 0.6
CTSB-228ENST00000533455 MINDY4BA8MYZ0 360 aa18.79■□□□□ 0.6
CTSB-228ENST00000533455 N4BP3O15049 544 aa18.79■□□□□ 0.6
CTSB-228ENST00000533455 DDAH1O94760 285 aa18.79■□□□□ 0.6
CTSB-228ENST00000533455 PCP11498 1178 aaKnown RBP18.79■□□□□ 0.6
CTSB-228ENST00000533455 TRAPPC10P48553 1259 aa18.79■□□□□ 0.6
CTSB-228ENST00000533455 ZNF174Q15697 407 aa18.79■□□□□ 0.6
CTSB-228ENST00000533455 TMTC3Q6ZXV5 915 aa18.79■□□□□ 0.6
CTSB-228ENST00000533455 ADGRA1Q86SQ6 560 aa18.79■□□□□ 0.6
CTSB-228ENST00000533455 SDR42E1Q8WUS8 393 aa18.79■□□□□ 0.6
CTSB-228ENST00000533455 CDC5LQ99459 802 aaKnown RBP18.79■□□□□ 0.6
CTSB-228ENST00000533455 GBP3Q9H0R5 595 aa18.79■□□□□ 0.6
CTSB-228ENST00000533455 V9GY48 417 aaPredicted RBP18.79■□□□□ 0.6
CTSB-228ENST00000533455 CNTNAP5Q8WYK1 1306 aa18.79■□□□□ 0.6
CTSB-228ENST00000533455 CTAGE15A4D2H0 777 aa18.78■□□□□ 0.6
CTSB-228ENST00000533455 EIF3JO75822 258 aaKnown RBP18.78■□□□□ 0.6
CTSB-228ENST00000533455 FGRP09769 529 aa18.78■□□□□ 0.6
CTSB-228ENST00000533455 CTAGE8P0CG41 777 aa18.78■□□□□ 0.6
CTSB-228ENST00000533455 CCT6AP40227 531 aaKnown RBP18.78■□□□□ 0.6
CTSB-228ENST00000533455 AMPD2Q01433 879 aa18.78■□□□□ 0.6
CTSB-228ENST00000533455 TROAPQ12815 778 aa18.78■□□□□ 0.6
CTSB-228ENST00000533455 PAK1Q13153 545 aa18.78■□□□□ 0.6
CTSB-228ENST00000533455 PTGDRQ13258 359 aa18.78■□□□□ 0.6
CTSB-228ENST00000533455 IFIT1BQ5T764 474 aaKnown RBP18.78■□□□□ 0.6
CTSB-228ENST00000533455 SUSD4Q5VX71 490 aa18.78■□□□□ 0.6
CTSB-228ENST00000533455 RRAGBQ5VZM2 374 aa18.78■□□□□ 0.6
CTSB-228ENST00000533455 CTAGE6Q86UF2 777 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms