RNA–Protein interactions for RNA: ENST00000533408.1

PTP4A2-215, Transcript of protein tyrosine phosphatase type IVA, member 2, humanhuman

TSL 3

Gene PTP4A2, Length 376 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A2-215ENST00000533408 SH3D19Q5HYK7 790 aa24.73■■□□□ 1.55
PTP4A2-215ENST00000533408 Q6ZUG5 572 aa24.73■■□□□ 1.55
PTP4A2-215ENST00000533408 GMCL1P1Q8NEA9 526 aa24.73■■□□□ 1.55
PTP4A2-215ENST00000533408 TMEM47Q9BQJ4 181 aa24.73■■□□□ 1.55
PTP4A2-215ENST00000533408 SLC10A3P09131 477 aa24.72■■□□□ 1.55
PTP4A2-215ENST00000533408 NOGQ13253 232 aa24.72■■□□□ 1.55
PTP4A2-215ENST00000533408 PABPC4Q13310 644 aaKnown RBP eCLIP24.72■■□□□ 1.55
PTP4A2-215ENST00000533408 RCSD1Q6JBY9 416 aa24.72■■□□□ 1.55
PTP4A2-215ENST00000533408 SGMS1Q86VZ5 419 aa24.72■■□□□ 1.55
PTP4A2-215ENST00000533408 RASAL3Q86YV0 1011 aa24.72■■□□□ 1.55
PTP4A2-215ENST00000533408 SIAH1Q8IUQ4 282 aa24.72■■□□□ 1.55
PTP4A2-215ENST00000533408 PROCA1Q8NCQ7 364 aaPredicted RBP24.72■■□□□ 1.55
PTP4A2-215ENST00000533408 CHMP4CQ96CF2 233 aa24.72■■□□□ 1.55
PTP4A2-215ENST00000533408 VCPKMTQ9H867 229 aa24.72■■□□□ 1.55
PTP4A2-215ENST00000533408 SLC12A7Q9Y666 1083 aa24.72■■□□□ 1.55
PTP4A2-215ENST00000533408 MCM2P49736 904 aa24.71■■□□□ 1.55
PTP4A2-215ENST00000533408 MTMR2Q13614 643 aa24.71■■□□□ 1.55
PTP4A2-215ENST00000533408 PPP2R5BQ15173 497 aa24.71■■□□□ 1.55
PTP4A2-215ENST00000533408 SHROOM1Q2M3G4 852 aaPredicted RBP24.71■■□□□ 1.55
PTP4A2-215ENST00000533408 PNMA1Q8ND90 353 aa24.71■■□□□ 1.55
PTP4A2-215ENST00000533408 AGXT2Q9BYV1 514 aa24.71■■□□□ 1.55
PTP4A2-215ENST00000533408 LY9Q9HBG7 655 aa24.71■■□□□ 1.55
PTP4A2-215ENST00000533408 F5H6K3 240 aa24.7■■□□□ 1.54
PTP4A2-215ENST00000533408 RCAN1P53805 252 aa24.7■■□□□ 1.54
PTP4A2-215ENST00000533408 KLRC3Q07444 240 aa24.7■■□□□ 1.54
PTP4A2-215ENST00000533408 SREBF2Q12772 1141 aa24.7■■□□□ 1.54
PTP4A2-215ENST00000533408 OTUD7BQ6GQQ9 843 aa24.7■■□□□ 1.54
PTP4A2-215ENST00000533408 ACER1Q8TDN7 264 aa24.7■■□□□ 1.54
PTP4A2-215ENST00000533408 C12orf42Q96LP6 360 aa24.7■■□□□ 1.54
PTP4A2-215ENST00000533408 MAP3K14Q99558 947 aa24.7■■□□□ 1.54
PTP4A2-215ENST00000533408 KIF2CQ99661 725 aa24.7■■□□□ 1.54
PTP4A2-215ENST00000533408 A0A0G2JLL6 359 aaPredicted RBP24.69■■□□□ 1.54
PTP4A2-215ENST00000533408 A0A1W2PRG0 241 aa24.69■■□□□ 1.54
PTP4A2-215ENST00000533408 RAD21O60216 631 aa24.69■■□□□ 1.54
PTP4A2-215ENST00000533408 DDAH1O94760 285 aa24.69■■□□□ 1.54
PTP4A2-215ENST00000533408 PRRT2Q7Z6L0 340 aaPredicted RBP24.69■■□□□ 1.54
PTP4A2-215ENST00000533408 DCAF4Q8WV16 495 aa24.69■■□□□ 1.54
PTP4A2-215ENST00000533408 CPA1P15085 419 aa24.68■■□□□ 1.54
PTP4A2-215ENST00000533408 KIF5BP33176 963 aa24.68■■□□□ 1.54
PTP4A2-215ENST00000533408 HMGCS2P54868 508 aa24.68■■□□□ 1.54
PTP4A2-215ENST00000533408 SLFN13Q68D06 897 aa24.68■■□□□ 1.54
PTP4A2-215ENST00000533408 CCDC84Q86UT8 332 aaPredicted RBP24.68■■□□□ 1.54
PTP4A2-215ENST00000533408 CLEC10AQ8IUN9 316 aa24.68■■□□□ 1.54
PTP4A2-215ENST00000533408 LRRC47Q8N1G4 583 aaKnown RBP24.68■■□□□ 1.54
PTP4A2-215ENST00000533408 NKX2-3Q8TAU0 364 aa24.68■■□□□ 1.54
PTP4A2-215ENST00000533408 CNKSR2Q8WXI2 1034 aa24.68■■□□□ 1.54
PTP4A2-215ENST00000533408 BRF1Q92994 677 aa24.68■■□□□ 1.54
PTP4A2-215ENST00000533408 GMCL1Q96IK5 515 aa24.68■■□□□ 1.54
PTP4A2-215ENST00000533408 CAPNS2Q96L46 248 aa24.68■■□□□ 1.54
PTP4A2-215ENST00000533408 LRRC2Q9BYS8 371 aa24.68■■□□□ 1.54
PTP4A2-215ENST00000533408 FRMD4AQ9P2Q2 1039 aaPredicted RBP24.68■■□□□ 1.54
PTP4A2-215ENST00000533408 GREB1LQ9C091 1923 aaPredicted RBP24.68■■□□□ 1.54
PTP4A2-215ENST00000533408 ATAD5Q96QE3 1844 aa24.68■■□□□ 1.54
PTP4A2-215ENST00000533408 OTOFQ9HC10 1997 aa24.67■■□□□ 1.54
PTP4A2-215ENST00000533408 CCDC196A0A1B0GTZ2 297 aa24.67■■□□□ 1.54
PTP4A2-215ENST00000533408 WDR46O15213 610 aaKnown RBP24.67■■□□□ 1.54
PTP4A2-215ENST00000533408 SLC1A4P43007 532 aa24.67■■□□□ 1.54
PTP4A2-215ENST00000533408 EVCP57679 992 aa24.67■■□□□ 1.54
PTP4A2-215ENST00000533408 GPATCH4Q5T3I0 446 aaKnown RBP24.67■■□□□ 1.54
PTP4A2-215ENST00000533408 TCEANC2Q96MN5 208 aa24.67■■□□□ 1.54
PTP4A2-215ENST00000533408 CCL15-CCL14A0A0B4J2E2 113 aa24.66■■□□□ 1.54
PTP4A2-215ENST00000533408 MAP2K2P36507 400 aa24.66■■□□□ 1.54
PTP4A2-215ENST00000533408 GNAQP50148 359 aa24.66■■□□□ 1.54
PTP4A2-215ENST00000533408 ZYXQ15942 572 aaKnown RBP24.66■■□□□ 1.54
PTP4A2-215ENST00000533408 CCL15Q16663 113 aa24.66■■□□□ 1.54
PTP4A2-215ENST00000533408 ZNF654Q8IZM8 581 aa24.66■■□□□ 1.54
PTP4A2-215ENST00000533408 CTCFLQ8NI51 663 aaPredicted RBP24.66■■□□□ 1.54
PTP4A2-215ENST00000533408 ZNF274Q96GC6 653 aaPredicted RBP24.66■■□□□ 1.54
PTP4A2-215ENST00000533408 ZCCHC17Q9NP64 241 aaKnown RBP24.66■■□□□ 1.54
PTP4A2-215ENST00000533408 EMILIN3Q9NT22 766 aa24.66■■□□□ 1.54
PTP4A2-215ENST00000533408 SLC45A1Q9Y2W3 748 aa24.66■■□□□ 1.54
PTP4A2-215ENST00000533408 KLF18A0A0U1RQI7 1052 aa24.65■■□□□ 1.54
PTP4A2-215ENST00000533408 TESPA1A2RU30 521 aaPredicted RBP24.65■■□□□ 1.54
PTP4A2-215ENST00000533408 FAM155AB1AL88 458 aaPredicted RBP24.65■■□□□ 1.54
PTP4A2-215ENST00000533408 ZBTB43O43298 467 aa24.65■■□□□ 1.54
PTP4A2-215ENST00000533408 NDUFB10O96000 172 aa24.65■■□□□ 1.54
PTP4A2-215ENST00000533408 BMP3P12645 472 aa24.65■■□□□ 1.54
PTP4A2-215ENST00000533408 GJA5P36382 358 aa24.65■■□□□ 1.54
PTP4A2-215ENST00000533408 ASPRV1Q53RT3 343 aa24.65■■□□□ 1.54
PTP4A2-215ENST00000533408 CYP4F22Q6NT55 531 aa24.65■■□□□ 1.54
PTP4A2-215ENST00000533408 GADL1Q6ZQY3 521 aa24.65■■□□□ 1.54
PTP4A2-215ENST00000533408 MS4A4AQ96JQ5 239 aa24.65■■□□□ 1.54
PTP4A2-215ENST00000533408 ZSCAN31Q96LW9 406 aaPredicted RBP24.65■■□□□ 1.54
PTP4A2-215ENST00000533408 NAP1L2Q9ULW6 460 aaPredicted RBP24.65■■□□□ 1.54
PTP4A2-215ENST00000533408 USP17L15C9J2P7 530 aa24.64■■□□□ 1.54
PTP4A2-215ENST00000533408 USP17L13C9JLJ4 530 aa24.64■■□□□ 1.54
PTP4A2-215ENST00000533408 USP17L11C9JVI0 530 aa24.64■■□□□ 1.54
PTP4A2-215ENST00000533408 USP17L18D6R9N7 530 aa24.64■■□□□ 1.54
PTP4A2-215ENST00000533408 USP17L22D6RA61 530 aa24.64■■□□□ 1.54
PTP4A2-215ENST00000533408 USP17L17D6RBQ6 530 aa24.64■■□□□ 1.54
PTP4A2-215ENST00000533408 USP17L19D6RCP7 530 aa24.64■■□□□ 1.54
PTP4A2-215ENST00000533408 USP17L20D6RJB6 530 aa24.64■■□□□ 1.54
PTP4A2-215ENST00000533408 PARP1P09874 1014 aaKnown RBP24.64■■□□□ 1.54
PTP4A2-215ENST00000533408 USP17L24Q0WX57 530 aa24.64■■□□□ 1.54
PTP4A2-215ENST00000533408 MKRN3Q13064 507 aaKnown RBP24.64■■□□□ 1.54
PTP4A2-215ENST00000533408 GRM1Q13255 1194 aa24.64■■□□□ 1.54
PTP4A2-215ENST00000533408 APOA5Q6Q788 366 aa24.64■■□□□ 1.54
PTP4A2-215ENST00000533408 CHURC1Q8WUH1 139 aa24.64■■□□□ 1.54
PTP4A2-215ENST00000533408 LZTS2Q9BRK4 669 aa24.64■■□□□ 1.54
PTP4A2-215ENST00000533408 RBM28Q9NW13 759 aaKnown RBP24.64■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms