RNA–Protein interactions for RNA: ENST00000533279.1

GMDS-210, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

TSL 5

Gene GMDS, Length 817 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-210ENST00000533279 METAP2P50579 478 aaKnown RBP eCLIP13.27□□□□□ -0.29
GMDS-210ENST00000533279 APLP1P51693 650 aa13.27□□□□□ -0.29
GMDS-210ENST00000533279 IKQ13123 557 aaPredicted RBP13.27□□□□□ -0.29
GMDS-210ENST00000533279 PABPC4Q13310 644 aaKnown RBP eCLIP13.27□□□□□ -0.29
GMDS-210ENST00000533279 SNAPC2Q13487 334 aa13.27□□□□□ -0.29
GMDS-210ENST00000533279 CCDC96Q2M329 555 aa13.27□□□□□ -0.29
GMDS-210ENST00000533279 LDLRAD1Q5T700 205 aa13.27□□□□□ -0.29
GMDS-210ENST00000533279 SGMS1Q86VZ5 419 aa13.27□□□□□ -0.29
GMDS-210ENST00000533279 ZNF654Q8IZM8 581 aa13.27□□□□□ -0.29
GMDS-210ENST00000533279 LRRC47Q8N1G4 583 aaKnown RBP13.27□□□□□ -0.29
GMDS-210ENST00000533279 IGDCC4Q8TDY8 1250 aa13.27□□□□□ -0.29
GMDS-210ENST00000533279 NUP133Q8WUM0 1156 aa13.27□□□□□ -0.29
GMDS-210ENST00000533279 DCAF4Q8WV16 495 aa13.27□□□□□ -0.29
GMDS-210ENST00000533279 ANKS1AQ92625 1134 aa13.27□□□□□ -0.29
GMDS-210ENST00000533279 LPAR1Q92633 364 aa13.27□□□□□ -0.29
GMDS-210ENST00000533279 CCDC102AQ96A19 550 aa13.27□□□□□ -0.29
GMDS-210ENST00000533279 OPTNQ96CV9 577 aa13.27□□□□□ -0.29
GMDS-210ENST00000533279 TMEM47Q9BQJ4 181 aa13.27□□□□□ -0.29
GMDS-210ENST00000533279 KIAA1683Q9H0B3 1180 aa13.27□□□□□ -0.29
GMDS-210ENST00000533279 SLKQ9H2G2 1235 aaPredicted RBP13.27□□□□□ -0.29
GMDS-210ENST00000533279 RBM28Q9NW13 759 aaKnown RBP13.27□□□□□ -0.29
GMDS-210ENST00000533279 TMX2Q9Y320 296 aa13.27□□□□□ -0.29
GMDS-210ENST00000533279 TLL2Q9Y6L7 1015 aa13.27□□□□□ -0.29
GMDS-210ENST00000533279 GOLGA8AA7E2F4 631 aa13.26□□□□□ -0.29
GMDS-210ENST00000533279 CXCL11O14625 94 aa13.26□□□□□ -0.29
GMDS-210ENST00000533279 CDKL5O76039 1030 aa13.26□□□□□ -0.29
GMDS-210ENST00000533279 PARP1P09874 1014 aaKnown RBP13.26□□□□□ -0.29
GMDS-210ENST00000533279 ZBTB48P10074 688 aaPredicted RBP13.26□□□□□ -0.29
GMDS-210ENST00000533279 SLC1A4P43007 532 aa13.26□□□□□ -0.29
GMDS-210ENST00000533279 GTF2A2P52657 109 aa13.26□□□□□ -0.29
GMDS-210ENST00000533279 FMR1Q06787 632 aaKnown RBP eCLIP13.26□□□□□ -0.29
GMDS-210ENST00000533279 APOBRQ0VD83 1088 aa13.26□□□□□ -0.29
GMDS-210ENST00000533279 SPP2Q13103 211 aa13.26□□□□□ -0.29
GMDS-210ENST00000533279 RRP1BQ14684 758 aaKnown RBP13.26□□□□□ -0.29
GMDS-210ENST00000533279 SEC23AQ15436 765 aa13.26□□□□□ -0.29
GMDS-210ENST00000533279 ZYXQ15942 572 aaKnown RBP13.26□□□□□ -0.29
GMDS-210ENST00000533279 ASPRV1Q53RT3 343 aa13.26□□□□□ -0.29
GMDS-210ENST00000533279 GPATCH4Q5T3I0 446 aaKnown RBP13.26□□□□□ -0.29
GMDS-210ENST00000533279 RGMBQ6NW40 437 aa13.26□□□□□ -0.29
GMDS-210ENST00000533279 MOB2Q70IA6 237 aa13.26□□□□□ -0.29
GMDS-210ENST00000533279 FASTKD5Q7L8L6 764 aaKnown RBP13.26□□□□□ -0.29
GMDS-210ENST00000533279 MICU3Q86XE3 530 aa13.26□□□□□ -0.29
GMDS-210ENST00000533279 GMCL1P1Q8NEA9 526 aa13.26□□□□□ -0.29
GMDS-210ENST00000533279 HHIPL1Q96JK4 782 aa13.26□□□□□ -0.29
GMDS-210ENST00000533279 KIF2CQ99661 725 aa13.26□□□□□ -0.29
GMDS-210ENST00000533279 IL17RBQ9NRM6 502 aa13.26□□□□□ -0.29
GMDS-210ENST00000533279 CREBZFQ9NS37 354 aa13.26□□□□□ -0.29
GMDS-210ENST00000533279 CTDP1Q9Y5B0 961 aaPredicted RBP13.26□□□□□ -0.29
GMDS-210ENST00000533279 CETPP11597 493 aa13.25□□□□□ -0.29
GMDS-210ENST00000533279 GUCY1A2P33402 732 aa13.25□□□□□ -0.29
GMDS-210ENST00000533279 ECE1P42892 770 aa13.25□□□□□ -0.29
GMDS-210ENST00000533279 BACE1P56817 501 aa13.25□□□□□ -0.29
GMDS-210ENST00000533279 AKAP17AQ02040 695 aaKnown RBP13.25□□□□□ -0.29
GMDS-210ENST00000533279 MTMR2Q13614 643 aa13.25□□□□□ -0.29
GMDS-210ENST00000533279 RTN1Q16799 776 aa13.25□□□□□ -0.29
GMDS-210ENST00000533279 CST9Q5W186 159 aa13.25□□□□□ -0.29
GMDS-210ENST00000533279 SLFN13Q68D06 897 aa13.25□□□□□ -0.29
GMDS-210ENST00000533279 RCSD1Q6JBY9 416 aa13.25□□□□□ -0.29
GMDS-210ENST00000533279 APOA5Q6Q788 366 aa13.25□□□□□ -0.29
GMDS-210ENST00000533279 SAPCD2Q86UD0 394 aa13.25□□□□□ -0.29
GMDS-210ENST00000533279 CLEC10AQ8IUN9 316 aa13.25□□□□□ -0.29
GMDS-210ENST00000533279 MKL1Q969V6 931 aa13.25□□□□□ -0.29
GMDS-210ENST00000533279 ZNF274Q96GC6 653 aaPredicted RBP13.25□□□□□ -0.29
GMDS-210ENST00000533279 WNK4Q96J92 1243 aa13.25□□□□□ -0.29
GMDS-210ENST00000533279 CLMNQ96JQ2 1002 aa13.25□□□□□ -0.29
GMDS-210ENST00000533279 LZTS2Q9BRK4 669 aa13.25□□□□□ -0.29
GMDS-210ENST00000533279 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.25□□□□□ -0.29
GMDS-210ENST00000533279 AGXT2Q9BYV1 514 aa13.25□□□□□ -0.29
GMDS-210ENST00000533279 VCPKMTQ9H867 229 aa13.25□□□□□ -0.29
GMDS-210ENST00000533279 OTOFQ9HC10 1997 aa13.25□□□□□ -0.29
GMDS-210ENST00000533279 GREB1LQ9C091 1923 aaPredicted RBP13.24□□□□□ -0.29
GMDS-210ENST00000533279 WDR46O15213 610 aaKnown RBP13.24□□□□□ -0.29
GMDS-210ENST00000533279 NOVP48745 357 aa13.24□□□□□ -0.29
GMDS-210ENST00000533279 TOB2Q14106 344 aaPredicted RBP13.24□□□□□ -0.29
GMDS-210ENST00000533279 GADL1Q6ZQY3 521 aa13.24□□□□□ -0.29
GMDS-210ENST00000533279 SNX21Q969T3 373 aa13.24□□□□□ -0.29
GMDS-210ENST00000533279 GMCL1Q96IK5 515 aa13.24□□□□□ -0.29
GMDS-210ENST00000533279 MAP3K14Q99558 947 aa13.24□□□□□ -0.29
GMDS-210ENST00000533279 KIF3AQ9Y496 699 aa13.24□□□□□ -0.29
GMDS-210ENST00000533279 MYH4Q9Y623 1939 aa13.23□□□□□ -0.29
GMDS-210ENST00000533279 MANSC4A6NHS7 340 aaPredicted RBP13.23□□□□□ -0.29
GMDS-210ENST00000533279 F5H6K3 240 aa13.23□□□□□ -0.29
GMDS-210ENST00000533279 K7ELQ4 463 aaPredicted RBP13.23□□□□□ -0.29
GMDS-210ENST00000533279 BMP3P12645 472 aa13.23□□□□□ -0.29
GMDS-210ENST00000533279 HMGCS2P54868 508 aa13.23□□□□□ -0.29
GMDS-210ENST00000533279 CACNB1Q02641 598 aaPredicted RBP13.23□□□□□ -0.29
GMDS-210ENST00000533279 KLRC3Q07444 240 aa13.23□□□□□ -0.29
GMDS-210ENST00000533279 SREBF2Q12772 1141 aa13.23□□□□□ -0.29
GMDS-210ENST00000533279 STK3Q13188 491 aa13.23□□□□□ -0.29
GMDS-210ENST00000533279 SHROOM1Q2M3G4 852 aaPredicted RBP13.23□□□□□ -0.29
GMDS-210ENST00000533279 OTUD7BQ6GQQ9 843 aa13.23□□□□□ -0.29
GMDS-210ENST00000533279 CCDC84Q86UT8 332 aaPredicted RBP13.23□□□□□ -0.29
GMDS-210ENST00000533279 FAM160B2Q86V87 743 aa13.23□□□□□ -0.29
GMDS-210ENST00000533279 TRIM22Q8IYM9 498 aa13.23□□□□□ -0.29
GMDS-210ENST00000533279 PROCA1Q8NCQ7 364 aaPredicted RBP13.23□□□□□ -0.29
GMDS-210ENST00000533279 ACER1Q8TDN7 264 aa13.23□□□□□ -0.29
GMDS-210ENST00000533279 CHURC1Q8WUH1 139 aa13.23□□□□□ -0.29
GMDS-210ENST00000533279 TANGO6Q9C0B7 1094 aa13.23□□□□□ -0.29
GMDS-210ENST00000533279 RBM27Q9P2N5 1060 aaKnown RBP13.23□□□□□ -0.29
GMDS-210ENST00000533279 PNMA3Q9UL41 463 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms