RNA–Protein interactions for RNA: ENST00000533068.5

PSMA1-213, Transcript of proteasome subunit alpha 1, humanhuman

TSL 4

Gene PSMA1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA1-213ENST00000533068 USP17L19D6RCP7 530 aa16.46■□□□□ 0.23
PSMA1-213ENST00000533068 USP17L20D6RJB6 530 aa16.46■□□□□ 0.23
PSMA1-213ENST00000533068 USP17L24Q0WX57 530 aa16.46■□□□□ 0.23
PSMA1-213ENST00000533068 RALYLQ86SE5 291 aaKnown RBP16.46■□□□□ 0.23
PSMA1-213ENST00000533068 SIAH1Q8IUQ4 282 aa16.46■□□□□ 0.23
PSMA1-213ENST00000533068 SPICE1Q8N0Z3 855 aa16.46■□□□□ 0.23
PSMA1-213ENST00000533068 ZNF296Q8WUU4 475 aaPredicted RBP16.46■□□□□ 0.23
PSMA1-213ENST00000533068 LPAR1Q92633 364 aa16.46■□□□□ 0.23
PSMA1-213ENST00000533068 TANGO6Q9C0B7 1094 aa16.46■□□□□ 0.23
PSMA1-213ENST00000533068 ASCC2Q9H1I8 757 aaPredicted RBP16.46■□□□□ 0.23
PSMA1-213ENST00000533068 RPAP3Q9H6T3 665 aaPredicted RBP16.46■□□□□ 0.23
PSMA1-213ENST00000533068 CPA4Q9UI42 421 aa16.46■□□□□ 0.23
PSMA1-213ENST00000533068 ISY1Q9ULR0 285 aaKnown RBP16.46■□□□□ 0.23
PSMA1-213ENST00000533068 B4E1Z4 1266 aa16.45■□□□□ 0.22
PSMA1-213ENST00000533068 NMT2O60551 498 aa16.45■□□□□ 0.22
PSMA1-213ENST00000533068 KDM4AO75164 1064 aa16.45■□□□□ 0.22
PSMA1-213ENST00000533068 CYP21A2P08686 494 aa16.45■□□□□ 0.22
PSMA1-213ENST00000533068 SP3Q02447 781 aa16.45■□□□□ 0.22
PSMA1-213ENST00000533068 SAMD1Q6SPF0 538 aaPredicted RBP16.45■□□□□ 0.22
PSMA1-213ENST00000533068 IQCA1Q86XH1 822 aa16.45■□□□□ 0.22
PSMA1-213ENST00000533068 LRRC47Q8N1G4 583 aaKnown RBP16.45■□□□□ 0.22
PSMA1-213ENST00000533068 REC8O95072 547 aa16.44■□□□□ 0.22
PSMA1-213ENST00000533068 HOXA7P31268 230 aaPredicted RBP16.44■□□□□ 0.22
PSMA1-213ENST00000533068 NT5C2P49902 561 aa16.44■□□□□ 0.22
PSMA1-213ENST00000533068 KIF22Q14807 665 aa16.44■□□□□ 0.22
PSMA1-213ENST00000533068 RNF20Q5VTR2 975 aa16.44■□□□□ 0.22
PSMA1-213ENST00000533068 GREB1LQ9C091 1923 aaPredicted RBP16.44■□□□□ 0.22
PSMA1-213ENST00000533068 WDR46O15213 610 aaKnown RBP16.43■□□□□ 0.22
PSMA1-213ENST00000533068 ECM2O94769 699 aaPredicted RBP16.43■□□□□ 0.22
PSMA1-213ENST00000533068 CCDC178Q5BJE1 867 aa16.43■□□□□ 0.22
PSMA1-213ENST00000533068 NOM1Q5C9Z4 860 aaKnown RBP16.43■□□□□ 0.22
PSMA1-213ENST00000533068 CATSPERGQ6ZRH7 1159 aa16.43■□□□□ 0.22
PSMA1-213ENST00000533068 ERO1AQ96HE7 468 aa16.43■□□□□ 0.22
PSMA1-213ENST00000533068 P2RX7Q99572 595 aaKnown RBP16.43■□□□□ 0.22
PSMA1-213ENST00000533068 ZKSCAN3Q9BRR0 538 aa16.43■□□□□ 0.22
PSMA1-213ENST00000533068 UBAC1Q9BSL1 405 aa16.43■□□□□ 0.22
PSMA1-213ENST00000533068 IL17RBQ9NRM6 502 aa16.43■□□□□ 0.22
PSMA1-213ENST00000533068 MTMR7Q9Y216 660 aa16.43■□□□□ 0.22
PSMA1-213ENST00000533068 GTF3C3Q9Y5Q9 886 aa16.43■□□□□ 0.22
PSMA1-213ENST00000533068 E7EWF7 191 aa16.42■□□□□ 0.22
PSMA1-213ENST00000533068 F5H6K3 240 aa16.42■□□□□ 0.22
PSMA1-213ENST00000533068 SLC27A2O14975 620 aa16.42■□□□□ 0.22
PSMA1-213ENST00000533068 FLOT1O75955 427 aa16.42■□□□□ 0.22
PSMA1-213ENST00000533068 GCLCP48506 637 aaPredicted RBP16.42■□□□□ 0.22
PSMA1-213ENST00000533068 HERVK_113P62684 666 aa16.42■□□□□ 0.22
PSMA1-213ENST00000533068 KLRC3Q07444 240 aa16.42■□□□□ 0.22
PSMA1-213ENST00000533068 KIAA1755Q5JYT7 1200 aa16.42■□□□□ 0.22
PSMA1-213ENST00000533068 CREB3L3Q68CJ9 461 aa16.42■□□□□ 0.22
PSMA1-213ENST00000533068 C17orf99Q6UX52 265 aa16.42■□□□□ 0.22
PSMA1-213ENST00000533068 ANKRD13CQ8N6S4 541 aa16.42■□□□□ 0.22
PSMA1-213ENST00000533068 NCOA7Q8NI08 942 aa16.42■□□□□ 0.22
PSMA1-213ENST00000533068 CD99L2Q8TCZ2 262 aa16.42■□□□□ 0.22
PSMA1-213ENST00000533068 MKL1Q969V6 931 aa16.42■□□□□ 0.22
PSMA1-213ENST00000533068 CHMP4CQ96CF2 233 aa16.42■□□□□ 0.22
PSMA1-213ENST00000533068 PAGR1Q9BTK6 254 aa16.42■□□□□ 0.22
PSMA1-213ENST00000533068 TCP11L1Q9NUJ3 509 aa16.42■□□□□ 0.22
PSMA1-213ENST00000533068 MYH4Q9Y623 1939 aa16.42■□□□□ 0.22
PSMA1-213ENST00000533068 CASP8AP2Q9UKL3 1982 aa16.41■□□□□ 0.22
PSMA1-213ENST00000533068 NDUFB10O96000 172 aa16.41■□□□□ 0.22
PSMA1-213ENST00000533068 ARHGEF6Q15052 776 aa16.41■□□□□ 0.22
PSMA1-213ENST00000533068 FAM83BQ5T0W9 1011 aa16.41■□□□□ 0.22
PSMA1-213ENST00000533068 SLFN13Q68D06 897 aa16.41■□□□□ 0.22
PSMA1-213ENST00000533068 GTF3C2Q8WUA4 911 aaPredicted RBP16.41■□□□□ 0.22
PSMA1-213ENST00000533068 ZSWIM5Q9P217 1185 aa16.41■□□□□ 0.22
PSMA1-213ENST00000533068 SYNPO2Q9UMS6 1093 aa16.41■□□□□ 0.22
PSMA1-213ENST00000533068 ERICH2A1L162 156 aa16.4■□□□□ 0.22
PSMA1-213ENST00000533068 TOP1P11387 765 aaKnown RBP16.4■□□□□ 0.22
PSMA1-213ENST00000533068 ZKSCAN1P17029 563 aaPredicted RBP16.4■□□□□ 0.22
PSMA1-213ENST00000533068 IKQ13123 557 aaPredicted RBP16.4■□□□□ 0.22
PSMA1-213ENST00000533068 COG2Q14746 738 aa16.4■□□□□ 0.22
PSMA1-213ENST00000533068 NECTIN1Q15223 517 aa16.4■□□□□ 0.22
PSMA1-213ENST00000533068 CCAR1Q8IX12 1150 aaKnown RBP16.4■□□□□ 0.22
PSMA1-213ENST00000533068 GMCL1P1Q8NEA9 526 aa16.4■□□□□ 0.22
PSMA1-213ENST00000533068 TTC14Q96N46 770 aa16.4■□□□□ 0.22
PSMA1-213ENST00000533068 ZSCAN10Q96SZ4 725 aaPredicted RBP16.4■□□□□ 0.22
PSMA1-213ENST00000533068 NUP88Q99567 741 aaPredicted RBP16.4■□□□□ 0.22
PSMA1-213ENST00000533068 HOXC10Q9NYD6 342 aa16.4■□□□□ 0.22
PSMA1-213ENST00000533068 TAF6LQ9Y6J9 622 aa16.4■□□□□ 0.22
PSMA1-213ENST00000533068 ADGRA2Q96PE1 1338 aa16.4■□□□□ 0.22
PSMA1-213ENST00000533068 BCRP11274 1271 aa16.39■□□□□ 0.21
PSMA1-213ENST00000533068 SLC1A4P43007 532 aa16.39■□□□□ 0.21
PSMA1-213ENST00000533068 SART3Q15020 963 aaKnown RBP16.39■□□□□ 0.21
PSMA1-213ENST00000533068 FAM110CQ1W6H9 321 aa16.39■□□□□ 0.21
PSMA1-213ENST00000533068 CCDC96Q2M329 555 aa16.39■□□□□ 0.21
PSMA1-213ENST00000533068 NKX2-3Q8TAU0 364 aa16.39■□□□□ 0.21
PSMA1-213ENST00000533068 TMEM47Q9BQJ4 181 aa16.39■□□□□ 0.21
PSMA1-213ENST00000533068 KAT14Q9H8E8 782 aa16.39■□□□□ 0.21
PSMA1-213ENST00000533068 CWC22Q9HCG8 908 aaKnown RBP16.39■□□□□ 0.21
PSMA1-213ENST00000533068 CTDP1Q9Y5B0 961 aaPredicted RBP16.39■□□□□ 0.21
PSMA1-213ENST00000533068 TNKSO95271 1327 aa16.39■□□□□ 0.21
PSMA1-213ENST00000533068 SPDYE16A6NNV3 312 aaPredicted RBP16.38■□□□□ 0.21
PSMA1-213ENST00000533068 IFIT3O14879 490 aaKnown RBP16.38■□□□□ 0.21
PSMA1-213ENST00000533068 FMNL1O95466 1100 aaPredicted RBP16.38■□□□□ 0.21
PSMA1-213ENST00000533068 BMP3P12645 472 aa16.38■□□□□ 0.21
PSMA1-213ENST00000533068 MCCP23508 829 aa16.38■□□□□ 0.21
PSMA1-213ENST00000533068 LACTBP83111 547 aaPredicted RBP16.38■□□□□ 0.21
PSMA1-213ENST00000533068 IFIT1BQ5T764 474 aaKnown RBP16.38■□□□□ 0.21
PSMA1-213ENST00000533068 COL13A1Q5TAT6 717 aaPredicted RBP16.38■□□□□ 0.21
PSMA1-213ENST00000533068 STOX1Q6ZVD7 989 aa16.38■□□□□ 0.21
PSMA1-213ENST00000533068 CYB5R4Q7L1T6 521 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms