RNA–Protein interactions for RNA: ENST00000533018.1

PCF11-206, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 3

Gene PCF11, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-206ENST00000533018 AKR1B1P15121 316 aa21.43■■□□□ 1.02
PCF11-206ENST00000533018 COG2Q14746 738 aa21.43■■□□□ 1.02
PCF11-206ENST00000533018 GPATCH3Q96I76 525 aa21.43■■□□□ 1.02
PCF11-206ENST00000533018 NBPF3Q9H094 633 aa21.43■■□□□ 1.02
PCF11-206ENST00000533018 HOXC10Q9NYD6 342 aa21.43■■□□□ 1.02
PCF11-206ENST00000533018 ICA1Q05084 483 aa21.42■■□□□ 1.02
PCF11-206ENST00000533018 MAP3K21Q5TCX8 1036 aa21.42■■□□□ 1.02
PCF11-206ENST00000533018 SAMD1Q6SPF0 538 aaPredicted RBP21.42■■□□□ 1.02
PCF11-206ENST00000533018 LBX2Q6XYB7 198 aa21.42■■□□□ 1.02
PCF11-206ENST00000533018 PUS7LQ9H0K6 701 aaKnown RBP21.42■■□□□ 1.02
PCF11-206ENST00000533018 SH2D4AQ9H788 454 aa21.42■■□□□ 1.02
PCF11-206ENST00000533018 ALPK3Q96L96 1907 aa21.41■■□□□ 1.02
PCF11-206ENST00000533018 SLC15A5A6NIM6 579 aa21.41■■□□□ 1.02
PCF11-206ENST00000533018 PTPREP23469 700 aa21.41■■□□□ 1.02
PCF11-206ENST00000533018 CCND3P30281 292 aaPredicted RBP21.41■■□□□ 1.02
PCF11-206ENST00000533018 CDK8P49336 464 aa21.41■■□□□ 1.02
PCF11-206ENST00000533018 ATP2B2Q01814 1243 aa21.41■■□□□ 1.02
PCF11-206ENST00000533018 C12orf60Q5U649 245 aa21.41■■□□□ 1.02
PCF11-206ENST00000533018 CLEC10AQ8IUN9 316 aa21.41■■□□□ 1.02
PCF11-206ENST00000533018 SPICE1Q8N0Z3 855 aa21.41■■□□□ 1.02
PCF11-206ENST00000533018 C11orf49Q9H6J7 331 aa21.41■■□□□ 1.02
PCF11-206ENST00000533018 OGDHLQ9ULD0 1010 aa21.41■■□□□ 1.02
PCF11-206ENST00000533018 SMIM22K7EJ46 135 aa21.4■■□□□ 1.02
PCF11-206ENST00000533018 MFSD14CQ5VZR4 134 aa21.4■■□□□ 1.02
PCF11-206ENST00000533018 C7orf61Q8IZ16 206 aa21.4■■□□□ 1.02
PCF11-206ENST00000533018 CCDC17Q96LX7 622 aa21.4■■□□□ 1.02
PCF11-206ENST00000533018 DCTPP1Q9H773 170 aa21.4■■□□□ 1.02
PCF11-206ENST00000533018 RAD21O60216 631 aa21.39■■□□□ 1.01
PCF11-206ENST00000533018 FLOT1O75955 427 aa21.39■■□□□ 1.01
PCF11-206ENST00000533018 PLS1Q14651 629 aa21.39■■□□□ 1.01
PCF11-206ENST00000533018 KIAA1755Q5JYT7 1200 aa21.39■■□□□ 1.01
PCF11-206ENST00000533018 TSHZ3Q63HK5 1081 aa21.39■■□□□ 1.01
PCF11-206ENST00000533018 CTR9Q6PD62 1173 aa21.39■■□□□ 1.01
PCF11-206ENST00000533018 C16orf86Q6ZW13 317 aa21.39■■□□□ 1.01
PCF11-206ENST00000533018 LPAR1Q92633 364 aa21.39■■□□□ 1.01
PCF11-206ENST00000533018 CNGA1P29973 690 aa21.38■■□□□ 1.01
PCF11-206ENST00000533018 GRB14Q14449 540 aa21.38■■□□□ 1.01
PCF11-206ENST00000533018 DPP9Q86TI2 863 aa21.38■■□□□ 1.01
PCF11-206ENST00000533018 STK11IPQ8N1F8 1099 aa21.38■■□□□ 1.01
PCF11-206ENST00000533018 FLRT1Q9NZU1 646 aa21.38■■□□□ 1.01
PCF11-206ENST00000533018 TMX2Q9Y320 296 aa21.38■■□□□ 1.01
PCF11-206ENST00000533018 MNX1P50219 401 aaPredicted RBP21.37■■□□□ 1.01
PCF11-206ENST00000533018 SIAH1Q8IUQ4 282 aa21.37■■□□□ 1.01
PCF11-206ENST00000533018 MOV10L1Q9BXT6 1211 aaKnown RBP21.37■■□□□ 1.01
PCF11-206ENST00000533018 SPATC1LQ9H0A9 340 aa21.37■■□□□ 1.01
PCF11-206ENST00000533018 VCPKMTQ9H867 229 aa21.37■■□□□ 1.01
PCF11-206ENST00000533018 ARPP21Q9UBL0 812 aaPredicted RBP21.37■■□□□ 1.01
PCF11-206ENST00000533018 STAP2Q9UGK3 403 aa21.37■■□□□ 1.01
PCF11-206ENST00000533018 EEF2P13639 858 aaKnown RBP21.36■■□□□ 1.01
PCF11-206ENST00000533018 DSG3P32926 999 aa21.36■■□□□ 1.01
PCF11-206ENST00000533018 LHX8Q68G74 356 aa21.36■■□□□ 1.01
PCF11-206ENST00000533018 MB21D1Q8N884 522 aa21.36■■□□□ 1.01
PCF11-206ENST00000533018 KBTBD3Q8NAB2 608 aa21.36■■□□□ 1.01
PCF11-206ENST00000533018 NPLOC4Q8TAT6 608 aa21.36■■□□□ 1.01
PCF11-206ENST00000533018 STRBPQ96SI9 672 aaKnown RBP21.36■■□□□ 1.01
PCF11-206ENST00000533018 KANSL2Q9H9L4 492 aa21.36■■□□□ 1.01
PCF11-206ENST00000533018 ZMYND8Q9ULU4 1186 aaPredicted RBP21.36■■□□□ 1.01
PCF11-206ENST00000533018 RLFQ13129 1914 aa21.35■■□□□ 1.01
PCF11-206ENST00000533018 DNAH12Q6ZR08 3092 aa21.35■■□□□ 1.01
PCF11-206ENST00000533018 MINDY4BA8MYZ0 360 aa21.35■■□□□ 1.01
PCF11-206ENST00000533018 STRNO43815 780 aa21.35■■□□□ 1.01
PCF11-206ENST00000533018 ERCC3P19447 782 aa21.35■■□□□ 1.01
PCF11-206ENST00000533018 ADORA2AP29274 412 aa21.35■■□□□ 1.01
PCF11-206ENST00000533018 NCAPG2Q86XI2 1143 aa21.35■■□□□ 1.01
PCF11-206ENST00000533018 ATG4CQ96DT6 458 aa21.35■■□□□ 1.01
PCF11-206ENST00000533018 MKNK2Q9HBH9 465 aa21.35■■□□□ 1.01
PCF11-206ENST00000533018 WDR46O15213 610 aaKnown RBP21.34■■□□□ 1.01
PCF11-206ENST00000533018 RNF113AO15541 343 aaKnown RBP21.34■■□□□ 1.01
PCF11-206ENST00000533018 APPP05067 770 aa21.34■■□□□ 1.01
PCF11-206ENST00000533018 CYP2C19P33261 490 aa21.34■■□□□ 1.01
PCF11-206ENST00000533018 APPBP2Q92624 585 aa21.34■■□□□ 1.01
PCF11-206ENST00000533018 OSBP2Q969R2 916 aa21.34■■□□□ 1.01
PCF11-206ENST00000533018 GOPCQ9HD26 462 aa21.34■■□□□ 1.01
PCF11-206ENST00000533018 HOXC6P09630 235 aa21.33■■□□□ 1.01
PCF11-206ENST00000533018 SYN1P17600 705 aa21.33■■□□□ 1.01
PCF11-206ENST00000533018 SHCBP1Q8NEM2 672 aa21.33■■□□□ 1.01
PCF11-206ENST00000533018 PRO3102Q9H379 93 aa21.33■■□□□ 1.01
PCF11-206ENST00000533018 MROH8Q9H579 483 aa21.33■■□□□ 1.01
PCF11-206ENST00000533018 SLC5A4Q9NY91 659 aa21.33■■□□□ 1.01
PCF11-206ENST00000533018 LAMA3Q16787 3333 aa21.33■■□□□ 1
PCF11-206ENST00000533018 PFASO15067 1338 aa21.32■■□□□ 1
PCF11-206ENST00000533018 FRMPD3Q5JV73 1810 aa21.32■■□□□ 1
PCF11-206ENST00000533018 GSG1L2A8MUP6 293 aa21.32■■□□□ 1
PCF11-206ENST00000533018 ZFYP08048 801 aaPredicted RBP21.32■■□□□ 1
PCF11-206ENST00000533018 TDO2P48775 406 aa21.32■■□□□ 1
PCF11-206ENST00000533018 LRRFIP1Q32MZ4 808 aaKnown RBP21.32■■□□□ 1
PCF11-206ENST00000533018 DDX20Q9UHI6 824 aaKnown RBP21.32■■□□□ 1
PCF11-206ENST00000533018 A0A0G2JMZ2 1700 aa21.32■■□□□ 1
PCF11-206ENST00000533018 COL11A1P12107 1806 aaPredicted RBP21.32■■□□□ 1
PCF11-206ENST00000533018 ZNFX1Q9P2E3 1918 aaKnown RBP21.31■■□□□ 1
PCF11-206ENST00000533018 GPAA1O43292 621 aa21.31■■□□□ 1
PCF11-206ENST00000533018 MSCO60682 206 aa21.31■■□□□ 1
PCF11-206ENST00000533018 SBK1Q52WX2 424 aa21.31■■□□□ 1
PCF11-206ENST00000533018 PCDHB15Q9Y5E8 787 aa21.31■■□□□ 1
PCF11-206ENST00000533018 PARP14Q460N5 1801 aa21.31■■□□□ 1
PCF11-206ENST00000533018 ERC2O15083 957 aa21.3■■□□□ 1
PCF11-206ENST00000533018 GNAT2P19087 354 aa21.3■■□□□ 1
PCF11-206ENST00000533018 TMEM132BQ14DG7 1078 aa21.3■■□□□ 1
PCF11-206ENST00000533018 FAM83BQ5T0W9 1011 aa21.3■■□□□ 1
PCF11-206ENST00000533018 GIMAP6Q6P9H5 292 aa21.3■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 104.6 ms