RNA–Protein interactions for RNA: ENST00000533001.1

KNL1-211, Transcript of kinetochore scaffold 1, humanhuman

TSL 1 (best)

Gene KNL1, Length 5,923 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNL1-211ENST00000533001 NUP205Q92621 2012 aa2.33□□□□□ -2.04
KNL1-211ENST00000533001 RIPK4P57078 832 aa2.33□□□□□ -2.04
KNL1-211ENST00000533001 UBE4AQ14139 1066 aa2.33□□□□□ -2.04
KNL1-211ENST00000533001 RTL5Q5HYW3 569 aaPredicted RBP2.33□□□□□ -2.04
KNL1-211ENST00000533001 TMEM240Q5SV17 173 aa2.33□□□□□ -2.04
KNL1-211ENST00000533001 HDGFL1Q5TGJ6 251 aa2.33□□□□□ -2.04
KNL1-211ENST00000533001 PPP1R42Q7Z4L9 355 aa2.33□□□□□ -2.04
KNL1-211ENST00000533001 FAM126BQ8IXS8 530 aa2.33□□□□□ -2.04
KNL1-211ENST00000533001 CCDC85AQ96PX6 553 aaPredicted RBP2.33□□□□□ -2.04
KNL1-211ENST00000533001 SRCIN1Q9C0H9 1055 aa2.33□□□□□ -2.04
KNL1-211ENST00000533001 JAG2Q9Y219 1238 aa2.33□□□□□ -2.04
KNL1-211ENST00000533001 MAP3K2Q9Y2U5 619 aa2.33□□□□□ -2.04
KNL1-211ENST00000533001 U2AF1L5P0DN76 240 aaPredicted RBP2.32□□□□□ -2.04
KNL1-211ENST00000533001 MCAMP43121 646 aa2.32□□□□□ -2.04
KNL1-211ENST00000533001 PSMC4P43686 418 aa2.32□□□□□ -2.04
KNL1-211ENST00000533001 CRKP46108 304 aa2.32□□□□□ -2.04
KNL1-211ENST00000533001 U2AF1Q01081 240 aaKnown RBP eCLIP2.32□□□□□ -2.04
KNL1-211ENST00000533001 PBX4Q9BYU1 374 aa2.32□□□□□ -2.04
KNL1-211ENST00000533001 ANGEL1Q9UNK9 670 aaKnown RBP2.32□□□□□ -2.04
KNL1-211ENST00000533001 ZNF652Q9Y2D9 606 aa2.32□□□□□ -2.04
KNL1-211ENST00000533001 FLNAP21333 2647 aaKnown RBP2.32□□□□□ -2.04
KNL1-211ENST00000533001 MYO3BQ8WXR4 1341 aa2.32□□□□□ -2.04
KNL1-211ENST00000533001 PNMA6EA0A0J9YXQ4 647 aa2.32□□□□□ -2.04
KNL1-211ENST00000533001 GHRHRQ02643 423 aa2.32□□□□□ -2.04
KNL1-211ENST00000533001 MORC4Q8TE76 937 aa2.32□□□□□ -2.04
KNL1-211ENST00000533001 LRFN3Q9BTN0 628 aa2.32□□□□□ -2.04
KNL1-211ENST00000533001 ELP3Q9H9T3 547 aa2.32□□□□□ -2.04
KNL1-211ENST00000533001 DDX58O95786 925 aaKnown RBP2.32□□□□□ -2.04
KNL1-211ENST00000533001 CYP2E1P05181 493 aaPredicted RBP2.32□□□□□ -2.04
KNL1-211ENST00000533001 LMBR1LQ6UX01 489 aa2.32□□□□□ -2.04
KNL1-211ENST00000533001 TRMT44Q8IYL2 757 aaKnown RBP2.32□□□□□ -2.04
KNL1-211ENST00000533001 NEK9Q8TD19 979 aa2.32□□□□□ -2.04
KNL1-211ENST00000533001 GGA1Q9UJY5 639 aa2.32□□□□□ -2.04
KNL1-211ENST00000533001 C2CD3Q4AC94 2353 aa2.32□□□□□ -2.04
KNL1-211ENST00000533001 SPDYE16A6NNV3 312 aaPredicted RBP2.32□□□□□ -2.04
KNL1-211ENST00000533001 GRXCR1A8MXD5 290 aa2.32□□□□□ -2.04
KNL1-211ENST00000533001 H7C1D1 291 aa2.32□□□□□ -2.04
KNL1-211ENST00000533001 PDHXO00330 501 aa2.32□□□□□ -2.04
KNL1-211ENST00000533001 GPR37L1O60883 481 aa2.32□□□□□ -2.04
KNL1-211ENST00000533001 HOXD8P13378 290 aaPredicted RBP2.32□□□□□ -2.04
KNL1-211ENST00000533001 RBL2Q08999 1139 aa2.32□□□□□ -2.04
KNL1-211ENST00000533001 GOLGA6L2Q8N9W4 650 aaPredicted RBP2.32□□□□□ -2.04
KNL1-211ENST00000533001 ACER1Q8TDN7 264 aa2.32□□□□□ -2.04
KNL1-211ENST00000533001 SNX27Q96L92 541 aa2.32□□□□□ -2.04
KNL1-211ENST00000533001 XRN2Q9H0D6 950 aaKnown RBP eCLIP2.32□□□□□ -2.04
KNL1-211ENST00000533001 HMG20BQ9P0W2 317 aa2.32□□□□□ -2.04
KNL1-211ENST00000533001 CXCL11O14625 94 aa2.32□□□□□ -2.04
KNL1-211ENST00000533001 RASGRP2Q7LDG7 609 aa2.32□□□□□ -2.04
KNL1-211ENST00000533001 MRPL50Q8N5N7 158 aaKnown RBP2.32□□□□□ -2.04
KNL1-211ENST00000533001 DEFB123Q8N688 67 aa2.32□□□□□ -2.04
KNL1-211ENST00000533001 C2orf69Q8N8R5 385 aa2.32□□□□□ -2.04
KNL1-211ENST00000533001 UPF3AQ9H1J1 476 aaKnown RBP2.32□□□□□ -2.04
KNL1-211ENST00000533001 IL25Q9H293 177 aa2.32□□□□□ -2.04
KNL1-211ENST00000533001 HYPKQ9NX55 129 aa2.32□□□□□ -2.04
KNL1-211ENST00000533001 AGTPBP1Q9UPW5 1226 aa2.32□□□□□ -2.04
KNL1-211ENST00000533001 RPTORQ8N122 1335 aa2.32□□□□□ -2.04
KNL1-211ENST00000533001 ARID4AP29374 1257 aaPredicted RBP2.31□□□□□ -2.04
KNL1-211ENST00000533001 IER5LQ5T953 404 aa2.31□□□□□ -2.04
KNL1-211ENST00000533001 PIP4P2Q8N4L2 257 aa2.31□□□□□ -2.04
KNL1-211ENST00000533001 ZNF408Q9H9D4 720 aa2.31□□□□□ -2.04
KNL1-211ENST00000533001 TLR7Q9NYK1 1049 aaKnown RBP2.31□□□□□ -2.04
KNL1-211ENST00000533001 MYH15Q9Y2K3 1946 aa2.31□□□□□ -2.04
KNL1-211ENST00000533001 CCL15-CCL14A0A0B4J2E2 113 aa2.31□□□□□ -2.04
KNL1-211ENST00000533001 CST5P28325 142 aaPredicted RBP2.31□□□□□ -2.04
KNL1-211ENST00000533001 KCNQ1P51787 676 aa2.31□□□□□ -2.04
KNL1-211ENST00000533001 MAP3K9P80192 1104 aa2.31□□□□□ -2.04
KNL1-211ENST00000533001 TFF2Q03403 129 aa2.31□□□□□ -2.04
KNL1-211ENST00000533001 NUMA1Q14980 2115 aa2.31□□□□□ -2.04
KNL1-211ENST00000533001 CCL15Q16663 113 aa2.31□□□□□ -2.04
KNL1-211ENST00000533001 ZNF792Q3KQV3 632 aa2.31□□□□□ -2.04
KNL1-211ENST00000533001 OLFML2BQ68BL8 750 aa2.31□□□□□ -2.04
KNL1-211ENST00000533001 CLEC10AQ8IUN9 316 aa2.31□□□□□ -2.04
KNL1-211ENST00000533001 BUD13Q9BRD0 619 aaKnown RBP eCLIP2.31□□□□□ -2.04
KNL1-211ENST00000533001 ZC3H12CQ9C0D7 883 aaKnown RBP2.31□□□□□ -2.04
KNL1-211ENST00000533001 ASCC2Q9H1I8 757 aaPredicted RBP2.31□□□□□ -2.04
KNL1-211ENST00000533001 DENND2AQ9ULE3 1009 aa2.31□□□□□ -2.04
KNL1-211ENST00000533001 KNSTRNQ9Y448 316 aa2.31□□□□□ -2.04
KNL1-211ENST00000533001 PDCD11Q14690 1871 aaKnown RBP2.31□□□□□ -2.04
KNL1-211ENST00000533001 POLEQ07864 2286 aa2.31□□□□□ -2.04
KNL1-211ENST00000533001 ALDH1A1P00352 501 aa2.31□□□□□ -2.04
KNL1-211ENST00000533001 PLCD1P51178 756 aa2.31□□□□□ -2.04
KNL1-211ENST00000533001 DLX2Q07687 328 aaPredicted RBP2.31□□□□□ -2.04
KNL1-211ENST00000533001 RCSD1Q6JBY9 416 aa2.31□□□□□ -2.04
KNL1-211ENST00000533001 NGEFQ8N5V2 710 aa2.31□□□□□ -2.04
KNL1-211ENST00000533001 LENG1Q96BZ8 264 aaPredicted RBP2.31□□□□□ -2.04
KNL1-211ENST00000533001 MTCH2Q9Y6C9 303 aa2.31□□□□□ -2.04
KNL1-211ENST00000533001 ANAPC1Q9H1A4 1944 aa2.31□□□□□ -2.04
KNL1-211ENST00000533001 ANK3Q12955 4377 aaKnown RBP2.31□□□□□ -2.04
KNL1-211ENST00000533001 SYN1P17600 705 aa2.31□□□□□ -2.04
KNL1-211ENST00000533001 WDR44Q5JSH3 913 aa2.31□□□□□ -2.04
KNL1-211ENST00000533001 SULF1Q8IWU6 871 aa2.31□□□□□ -2.04
KNL1-211ENST00000533001 TTC5Q8N0Z6 440 aa2.31□□□□□ -2.04
KNL1-211ENST00000533001 SUPT20HQ8NEM7 779 aa2.31□□□□□ -2.04
KNL1-211ENST00000533001 PRSS33Q8NF86 280 aa2.31□□□□□ -2.04
KNL1-211ENST00000533001 SSH1Q8WYL5 1049 aa2.31□□□□□ -2.04
KNL1-211ENST00000533001 MYD88Q99836 296 aa2.31□□□□□ -2.04
KNL1-211ENST00000533001 BICC1Q9H694 974 aaKnown RBP2.31□□□□□ -2.04
KNL1-211ENST00000533001 BCAS3Q9H6U6 928 aa2.31□□□□□ -2.04
KNL1-211ENST00000533001 DLGAP2Q9P1A6 1054 aa2.31□□□□□ -2.04
KNL1-211ENST00000533001 SUGT1Q9Y2Z0 365 aa2.31□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms