RNA–Protein interactions for RNA: ENST00000532700.6

SMG1-203, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-203ENST00000532700 ARPP21Q9UBL0 812 aaPredicted RBP21.37■■□□□ 1.01
SMG1-203ENST00000532700 IGHDP01880 384 aa21.36■■□□□ 1.01
SMG1-203ENST00000532700 LBX2Q6XYB7 198 aa21.36■■□□□ 1.01
SMG1-203ENST00000532700 FSD1Q9BTV5 496 aa21.36■■□□□ 1.01
SMG1-203ENST00000532700 TMX2Q9Y320 296 aa21.36■■□□□ 1.01
SMG1-203ENST00000532700 RABGAP1Q9Y3P9 1069 aa21.36■■□□□ 1.01
SMG1-203ENST00000532700 MINDY4BA8MYZ0 360 aa21.35■■□□□ 1.01
SMG1-203ENST00000532700 SGPL1O95470 568 aa21.35■■□□□ 1.01
SMG1-203ENST00000532700 HMGCRP04035 888 aa21.35■■□□□ 1.01
SMG1-203ENST00000532700 TANGO6Q9C0B7 1094 aa21.35■■□□□ 1.01
SMG1-203ENST00000532700 XRN2Q9H0D6 950 aaKnown RBP eCLIP21.35■■□□□ 1.01
SMG1-203ENST00000532700 TACC3Q9Y6A5 838 aa21.35■■□□□ 1.01
SMG1-203ENST00000532700 ZNF236Q9UL36 1845 aa21.34■■□□□ 1.01
SMG1-203ENST00000532700 ERC2O15083 957 aa21.34■■□□□ 1.01
SMG1-203ENST00000532700 PRDM1O75626 825 aa21.34■■□□□ 1.01
SMG1-203ENST00000532700 ZFYP08048 801 aaPredicted RBP21.34■■□□□ 1.01
SMG1-203ENST00000532700 MAPK4P31152 587 aa21.34■■□□□ 1.01
SMG1-203ENST00000532700 PDE1AP54750 535 aa21.34■■□□□ 1.01
SMG1-203ENST00000532700 PLEKHH3Q7Z736 793 aa21.34■■□□□ 1.01
SMG1-203ENST00000532700 DIS3LQ8TF46 1054 aaKnown RBP21.34■■□□□ 1.01
SMG1-203ENST00000532700 CCDC17Q96LX7 622 aa21.34■■□□□ 1.01
SMG1-203ENST00000532700 VCPKMTQ9H867 229 aa21.34■■□□□ 1.01
SMG1-203ENST00000532700 FBXO28Q9NVF7 368 aa21.34■■□□□ 1.01
SMG1-203ENST00000532700 FLRT1Q9NZU1 646 aa21.34■■□□□ 1.01
SMG1-203ENST00000532700 STAP2Q9UGK3 403 aa21.34■■□□□ 1.01
SMG1-203ENST00000532700 ATP2B2Q01814 1243 aa21.33■■□□□ 1.01
SMG1-203ENST00000532700 MAP3K21Q5TCX8 1036 aa21.33■■□□□ 1.01
SMG1-203ENST00000532700 IFNL3Q8IZI9 196 aa21.33■■□□□ 1.01
SMG1-203ENST00000532700 ATG4CQ96DT6 458 aa21.33■■□□□ 1.01
SMG1-203ENST00000532700 DDRGK1Q96HY6 314 aa21.33■■□□□ 1.01
SMG1-203ENST00000532700 NUDT12Q9BQG2 462 aa21.33■■□□□ 1.01
SMG1-203ENST00000532700 LNPKQ9C0E8 428 aa21.33■■□□□ 1.01
SMG1-203ENST00000532700 VPS53Q5VIR6 699 aa21.32■■□□□ 1
SMG1-203ENST00000532700 GIMAP6Q6P9H5 292 aa21.32■■□□□ 1
SMG1-203ENST00000532700 AMOTL1Q8IY63 956 aa21.32■■□□□ 1
SMG1-203ENST00000532700 GTF3C2Q8WUA4 911 aaPredicted RBP21.32■■□□□ 1
SMG1-203ENST00000532700 GCC1Q96CN9 775 aa21.32■■□□□ 1
SMG1-203ENST00000532700 NUP88Q99567 741 aaPredicted RBP21.32■■□□□ 1
SMG1-203ENST00000532700 MOV10L1Q9BXT6 1211 aaKnown RBP21.32■■□□□ 1
SMG1-203ENST00000532700 CRISPLD2Q9H0B8 497 aa21.32■■□□□ 1
SMG1-203ENST00000532700 ARHGEF10LQ9HCE6 1279 aa21.32■■□□□ 1
SMG1-203ENST00000532700 IGKV6D-41A0A0C4DH26 115 aa21.31■■□□□ 1
SMG1-203ENST00000532700 FARP2O94887 1054 aaPredicted RBP21.31■■□□□ 1
SMG1-203ENST00000532700 DSG3P32926 999 aa21.31■■□□□ 1
SMG1-203ENST00000532700 TDO2P48775 406 aa21.31■■□□□ 1
SMG1-203ENST00000532700 MNX1P50219 401 aaPredicted RBP21.31■■□□□ 1
SMG1-203ENST00000532700 COG2Q14746 738 aa21.31■■□□□ 1
SMG1-203ENST00000532700 B4GALNT3Q6L9W6 998 aa21.31■■□□□ 1
SMG1-203ENST00000532700 SAMD1Q6SPF0 538 aaPredicted RBP21.31■■□□□ 1
SMG1-203ENST00000532700 SMC5Q8IY18 1101 aa21.31■■□□□ 1
SMG1-203ENST00000532700 NPLOC4Q8TAT6 608 aa21.31■■□□□ 1
SMG1-203ENST00000532700 INCENPQ9NQS7 918 aa21.31■■□□□ 1
SMG1-203ENST00000532700 PATL2C9JE40 543 aaKnown RBP21.3■■□□□ 1
SMG1-203ENST00000532700 APPP05067 770 aa21.3■■□□□ 1
SMG1-203ENST00000532700 PRKAR2AP13861 404 aaKnown RBP21.3■■□□□ 1
SMG1-203ENST00000532700 CCND3P30281 292 aaPredicted RBP21.3■■□□□ 1
SMG1-203ENST00000532700 CACNB2Q08289 660 aaPredicted RBP21.3■■□□□ 1
SMG1-203ENST00000532700 WDR78Q5VTH9 848 aa21.3■■□□□ 1
SMG1-203ENST00000532700 NKX2-3Q8TAU0 364 aa21.3■■□□□ 1
SMG1-203ENST00000532700 SOCS4Q8WXH5 440 aa21.3■■□□□ 1
SMG1-203ENST00000532700 A0A0D9SFI3 127 aa21.29■■□□□ 1
SMG1-203ENST00000532700 H0YGN5 161 aa21.29■■□□□ 1
SMG1-203ENST00000532700 FLOT1O75955 427 aa21.29■■□□□ 1
SMG1-203ENST00000532700 XRCC5P13010 732 aaKnown RBP21.29■■□□□ 1
SMG1-203ENST00000532700 PTPREP23469 700 aa21.29■■□□□ 1
SMG1-203ENST00000532700 MAP2K5Q13163 448 aa21.29■■□□□ 1
SMG1-203ENST00000532700 FAM83BQ5T0W9 1011 aa21.29■■□□□ 1
SMG1-203ENST00000532700 LPAR1Q92633 364 aa21.29■■□□□ 1
SMG1-203ENST00000532700 FAM227BQ96M60 508 aa21.29■■□□□ 1
SMG1-203ENST00000532700 APBA2Q99767 749 aa21.29■■□□□ 1
SMG1-203ENST00000532700 KANSL2Q9H9L4 492 aa21.29■■□□□ 1
SMG1-203ENST00000532700 PCDH10Q9P2E7 1040 aa21.29■■□□□ 1
SMG1-203ENST00000532700 ZNFX1Q9P2E3 1918 aaKnown RBP21.29■■□□□ 1
SMG1-203ENST00000532700 RPTORQ8N122 1335 aa21.29■■□□□ 1
SMG1-203ENST00000532700 WDR46O15213 610 aaKnown RBP21.28■■□□□ 1
SMG1-203ENST00000532700 TFRCP02786 760 aaKnown RBP21.28■■□□□ 1
SMG1-203ENST00000532700 ZKSCAN1P17029 563 aaPredicted RBP21.28■■□□□ 1
SMG1-203ENST00000532700 GNAT2P19087 354 aa21.28■■□□□ 1
SMG1-203ENST00000532700 RGS2P41220 211 aa21.28■■□□□ 1
SMG1-203ENST00000532700 GRB14Q14449 540 aa21.28■■□□□ 1
SMG1-203ENST00000532700 SPATC1LQ9H0A9 340 aa21.28■■□□□ 1
SMG1-203ENST00000532700 SUPT16HQ9Y5B9 1047 aaKnown RBP21.28■■□□□ 1
SMG1-203ENST00000532700 IGHA2P01877 340 aa21.27■■□□□ 1
SMG1-203ENST00000532700 ERCC3P19447 782 aa21.27■■□□□ 1
SMG1-203ENST00000532700 IRX6P78412 446 aaPredicted RBP21.27■■□□□ 1
SMG1-203ENST00000532700 CTDSPL2Q05D32 466 aa21.27■■□□□ 1
SMG1-203ENST00000532700 TMEM132BQ14DG7 1078 aa21.27■■□□□ 1
SMG1-203ENST00000532700 FAM47AQ5JRC9 791 aa21.27■■□□□ 1
SMG1-203ENST00000532700 CCAR1Q8IX12 1150 aaKnown RBP21.27■■□□□ 1
SMG1-203ENST00000532700 CEP95Q96GE4 821 aa21.27■■□□□ 1
SMG1-203ENST00000532700 MKNK2Q9HBH9 465 aa21.27■■□□□ 1
SMG1-203ENST00000532700 PLXNA1Q9UIW2 1896 aa21.26■□□□□ 0.99
SMG1-203ENST00000532700 SLC15A5A6NIM6 579 aa21.26■□□□□ 0.99
SMG1-203ENST00000532700 RAD21O60216 631 aa21.26■□□□□ 0.99
SMG1-203ENST00000532700 SLC34A2O95436 690 aa21.26■□□□□ 0.99
SMG1-203ENST00000532700 CCNA1P78396 465 aa21.26■□□□□ 0.99
SMG1-203ENST00000532700 PPARAQ07869 468 aa21.26■□□□□ 0.99
SMG1-203ENST00000532700 ZNF589Q86UQ0 364 aaPredicted RBP21.26■□□□□ 0.99
SMG1-203ENST00000532700 TRPV1Q8NER1 839 aa21.26■□□□□ 0.99
SMG1-203ENST00000532700 REPS2Q8NFH8 660 aa21.26■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms