RNA–Protein interactions for RNA: ENST00000532540.5

TGFBR3-209, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 1 (best)

Gene TGFBR3, Length 3,913 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-209ENST00000532540 L2HGDHQ9H9P8 463 aa7.62□□□□□ -1.19
TGFBR3-209ENST00000532540 SWAP70Q9UH65 585 aa7.62□□□□□ -1.19
TGFBR3-209ENST00000532540 MTMR6Q9Y217 621 aa7.62□□□□□ -1.19
TGFBR3-209ENST00000532540 PRDM1O75626 825 aa7.61□□□□□ -1.19
TGFBR3-209ENST00000532540 TBC1D8O95759 1140 aa7.61□□□□□ -1.19
TGFBR3-209ENST00000532540 IFFO1Q0D2I5 559 aa7.61□□□□□ -1.19
TGFBR3-209ENST00000532540 PUM3Q15397 648 aaKnown RBP7.61□□□□□ -1.19
TGFBR3-209ENST00000532540 DIXDC1Q155Q3 683 aa7.61□□□□□ -1.19
TGFBR3-209ENST00000532540 SARM1Q6SZW1 724 aa7.61□□□□□ -1.19
TGFBR3-209ENST00000532540 ZNF804AQ7Z570 1209 aa7.61□□□□□ -1.19
TGFBR3-209ENST00000532540 CPLX4Q7Z7G2 160 aa7.61□□□□□ -1.19
TGFBR3-209ENST00000532540 RALYLQ86SE5 291 aaKnown RBP7.61□□□□□ -1.19
TGFBR3-209ENST00000532540 AMOTL1Q8IY63 956 aa7.61□□□□□ -1.19
TGFBR3-209ENST00000532540 CRACR2BQ8N4Y2 399 aaPredicted RBP7.61□□□□□ -1.19
TGFBR3-209ENST00000532540 STAG1Q8WVM7 1258 aa7.61□□□□□ -1.19
TGFBR3-209ENST00000532540 AATFQ9NY61 560 aaKnown RBP eCLIP7.61□□□□□ -1.19
TGFBR3-209ENST00000532540 MRFAP1Q9Y605 127 aa7.61□□□□□ -1.19
TGFBR3-209ENST00000532540 PNPLA7Q6ZV29 1317 aa7.61□□□□□ -1.19
TGFBR3-209ENST00000532540 KNDC1Q76NI1 1749 aa7.61□□□□□ -1.19
TGFBR3-209ENST00000532540 PEAK1Q9H792 1746 aa7.61□□□□□ -1.19
TGFBR3-209ENST00000532540 SMIM24O75264 130 aa7.61□□□□□ -1.19
TGFBR3-209ENST00000532540 NR1I2O75469 434 aa7.61□□□□□ -1.19
TGFBR3-209ENST00000532540 SASH1O94885 1247 aa7.61□□□□□ -1.19
TGFBR3-209ENST00000532540 FAM160A1Q05DH4 1040 aa7.61□□□□□ -1.19
TGFBR3-209ENST00000532540 KRT32Q14532 448 aa7.61□□□□□ -1.19
TGFBR3-209ENST00000532540 CCDC40Q4G0X9 1142 aa7.61□□□□□ -1.19
TGFBR3-209ENST00000532540 NAA16Q6N069 864 aaPredicted RBP7.61□□□□□ -1.19
TGFBR3-209ENST00000532540 FCHSD1Q86WN1 690 aa7.61□□□□□ -1.19
TGFBR3-209ENST00000532540 ZNF34Q8IZ26 560 aa7.61□□□□□ -1.19
TGFBR3-209ENST00000532540 ANKS4BQ8N8V4 417 aa7.61□□□□□ -1.19
TGFBR3-209ENST00000532540 WDR66Q8TBY9 1149 aa7.61□□□□□ -1.19
TGFBR3-209ENST00000532540 TBC1D22AQ8WUA7 517 aa7.61□□□□□ -1.19
TGFBR3-209ENST00000532540 FAM210AQ96ND0 272 aa7.61□□□□□ -1.19
TGFBR3-209ENST00000532540 ABCB6Q9NP58 842 aa7.61□□□□□ -1.19
TGFBR3-209ENST00000532540 DBNLQ9UJU6 430 aaKnown RBP7.61□□□□□ -1.19
TGFBR3-209ENST00000532540 RGS12O14924 1447 aa7.61□□□□□ -1.19
TGFBR3-209ENST00000532540 ZNF804BA4D1E1 1349 aa7.61□□□□□ -1.19
TGFBR3-209ENST00000532540 NTSR2O95665 410 aa7.61□□□□□ -1.19
TGFBR3-209ENST00000532540 SCRN1Q12765 414 aa7.61□□□□□ -1.19
TGFBR3-209ENST00000532540 RC3H1Q5TC82 1133 aaKnown RBP7.61□□□□□ -1.19
TGFBR3-209ENST00000532540 CCDC102BQ68D86 513 aa7.61□□□□□ -1.19
TGFBR3-209ENST00000532540 NIM1KQ8IY84 436 aa7.61□□□□□ -1.19
TGFBR3-209ENST00000532540 FAM227BQ96M60 508 aa7.61□□□□□ -1.19
TGFBR3-209ENST00000532540 GOPCQ9HD26 462 aa7.61□□□□□ -1.19
TGFBR3-209ENST00000532540 MINPP1Q9UNW1 487 aa7.61□□□□□ -1.19
TGFBR3-209ENST00000532540 XIRP1Q702N8 1843 aaKnown RBP7.6□□□□□ -1.19
TGFBR3-209ENST00000532540 RANBP6O60518 1105 aaKnown RBP7.6□□□□□ -1.19
TGFBR3-209ENST00000532540 PDE8BO95263 885 aa7.6□□□□□ -1.19
TGFBR3-209ENST00000532540 ADRA2BP18089 450 aa7.6□□□□□ -1.19
TGFBR3-209ENST00000532540 PCK1P35558 622 aa7.6□□□□□ -1.19
TGFBR3-209ENST00000532540 CFAP58Q5T655 872 aa7.6□□□□□ -1.19
TGFBR3-209ENST00000532540 PRPF38AQ8NAV1 312 aaKnown RBP7.6□□□□□ -1.19
TGFBR3-209ENST00000532540 NLGN2Q8NFZ4 835 aa7.6□□□□□ -1.19
TGFBR3-209ENST00000532540 RASSF8Q8NHQ8 419 aa7.6□□□□□ -1.19
TGFBR3-209ENST00000532540 CCDC97Q96F63 343 aaPredicted RBP7.6□□□□□ -1.19
TGFBR3-209ENST00000532540 GDAP1L1Q96MZ0 367 aa7.6□□□□□ -1.19
TGFBR3-209ENST00000532540 PAG1Q9NWQ8 432 aa7.6□□□□□ -1.19
TGFBR3-209ENST00000532540 TMOD2Q9NZR1 351 aa7.6□□□□□ -1.19
TGFBR3-209ENST00000532540 RNF181Q9P0P0 153 aa7.6□□□□□ -1.19
TGFBR3-209ENST00000532540 CDC23Q9UJX2 597 aa7.6□□□□□ -1.19
TGFBR3-209ENST00000532540 PALD1Q9ULE6 856 aa7.6□□□□□ -1.19
TGFBR3-209ENST00000532540 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.6□□□□□ -1.19
TGFBR3-209ENST00000532540 CARMIL3Q8ND23 1372 aa7.6□□□□□ -1.19
TGFBR3-209ENST00000532540 KIF20BQ96Q89 1820 aa7.6□□□□□ -1.19
TGFBR3-209ENST00000532540 VPS53Q5VIR6 699 aa7.6□□□□□ -1.19
TGFBR3-209ENST00000532540 TAX1BP1Q86VP1 789 aa7.6□□□□□ -1.19
TGFBR3-209ENST00000532540 EHBP1Q8NDI1 1231 aa7.6□□□□□ -1.19
TGFBR3-209ENST00000532540 SSH3Q8TE77 659 aa7.6□□□□□ -1.19
TGFBR3-209ENST00000532540 BRF1Q92994 677 aa7.6□□□□□ -1.19
TGFBR3-209ENST00000532540 MIEF2Q96C03 454 aa7.6□□□□□ -1.19
TGFBR3-209ENST00000532540 MASTLQ96GX5 879 aa7.6□□□□□ -1.19
TGFBR3-209ENST00000532540 JADE2Q9NQC1 790 aa7.6□□□□□ -1.19
TGFBR3-209ENST00000532540 TTF2Q9UNY4 1162 aaKnown RBP7.6□□□□□ -1.19
TGFBR3-209ENST00000532540 ONECUT3O60422 494 aaPredicted RBP7.6□□□□□ -1.19
TGFBR3-209ENST00000532540 LDHBP07195 334 aaKnown RBP7.6□□□□□ -1.19
TGFBR3-209ENST00000532540 RANBP1P43487 201 aa7.6□□□□□ -1.19
TGFBR3-209ENST00000532540 EIF6P56537 245 aaKnown RBP7.6□□□□□ -1.19
TGFBR3-209ENST00000532540 MYL5Q02045 173 aa7.6□□□□□ -1.19
TGFBR3-209ENST00000532540 IFT88Q13099 833 aa7.6□□□□□ -1.19
TGFBR3-209ENST00000532540 CAPRIN2Q6IMN6 1127 aaKnown RBP7.6□□□□□ -1.19
TGFBR3-209ENST00000532540 NAPBQ9H115 298 aa7.6□□□□□ -1.19
TGFBR3-209ENST00000532540 CNTNAP4Q9C0A0 1308 aa7.6□□□□□ -1.19
TGFBR3-209ENST00000532540 ENO4A6NNW6 628 aa7.59□□□□□ -1.19
TGFBR3-209ENST00000532540 LUC7L3O95232 432 aaKnown RBP7.59□□□□□ -1.19
TGFBR3-209ENST00000532540 CPA1P15085 419 aa7.59□□□□□ -1.19
TGFBR3-209ENST00000532540 PAX7P23759 505 aa7.59□□□□□ -1.19
TGFBR3-209ENST00000532540 MATR3P43243 847 aaKnown RBP eCLIP7.59□□□□□ -1.191e-6■■■■□ 19.3
TGFBR3-209ENST00000532540 GPSM2P81274 684 aa7.59□□□□□ -1.19
TGFBR3-209ENST00000532540 MXRA7P84157 204 aa7.59□□□□□ -1.19
TGFBR3-209ENST00000532540 FOXO4P98177 505 aa7.59□□□□□ -1.19
TGFBR3-209ENST00000532540 RASSF7Q02833 373 aa7.59□□□□□ -1.19
TGFBR3-209ENST00000532540 GRAPQ13588 217 aa7.59□□□□□ -1.19
TGFBR3-209ENST00000532540 HSP90AA4PQ58FG1 418 aa7.59□□□□□ -1.19
TGFBR3-209ENST00000532540 PRAMEF18Q5VWM3 479 aa7.59□□□□□ -1.19
TGFBR3-209ENST00000532540 TXNRD3Q86VQ6 643 aa7.59□□□□□ -1.19
TGFBR3-209ENST00000532540 GRAPLQ8TC17 118 aaPredicted RBP7.59□□□□□ -1.19
TGFBR3-209ENST00000532540 LPIN2Q92539 896 aa7.59□□□□□ -1.19
TGFBR3-209ENST00000532540 DHX58Q96C10 678 aa7.59□□□□□ -1.19
TGFBR3-209ENST00000532540 TRIM4Q9C037 500 aa7.59□□□□□ -1.19
TGFBR3-209ENST00000532540 YIPF3Q9GZM5 350 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms